RNA–Protein interactions for RNA: ENST00000263388.6

NOTCH3-201, Transcript of notch 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH3, Length 8,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-201ENST00000263388 TRIM29Q14134 588 aa21.32■■□□□ 1
NOTCH3-201ENST00000263388 MCTP1Q6DN14 999 aa21.32■■□□□ 1
NOTCH3-201ENST00000263388 FANCIQ9NVI1 1328 aa21.32■■□□□ 1
NOTCH3-201ENST00000263388 NEXNQ0ZGT2 675 aa21.32■■□□□ 1
NOTCH3-201ENST00000263388 AMOTL1Q8IY63 956 aa21.31■■□□□ 1
NOTCH3-201ENST00000263388 ST20-MTHFSA0A0A6YYL1 179 aa21.3■■□□□ 1
NOTCH3-201ENST00000263388 COG3Q96JB2 828 aa21.3■■□□□ 1
NOTCH3-201ENST00000263388 RNF20Q5VTR2 975 aa21.29■■□□□ 1
NOTCH3-201ENST00000263388 RRP7AQ9Y3A4 280 aaKnown RBP21.29■■□□□ 1
NOTCH3-201ENST00000263388 C9orf78Q9NZ63 289 aaPredicted RBP21.28■■□□□ 1
NOTCH3-201ENST00000263388 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.28■■□□□ 1
NOTCH3-201ENST00000263388 TCEAL9Q9UHQ7 104 aa21.27■■□□□ 1
NOTCH3-201ENST00000263388 CRBNQ96SW2 442 aa21.27■■□□□ 1
NOTCH3-201ENST00000263388 CCDC47Q96A33 483 aaKnown RBP21.26■□□□□ 0.99
NOTCH3-201ENST00000263388 LTV1Q96GA3 475 aaPredicted RBP21.26■□□□□ 0.99
NOTCH3-201ENST00000263388 CCDC9Q9Y3X0 531 aaKnown RBP21.26■□□□□ 0.99
NOTCH3-201ENST00000263388 TRAK1Q9UPV9 953 aa21.26■□□□□ 0.99
NOTCH3-201ENST00000263388 FOXD4L6Q3SYB3 417 aaPredicted RBP21.26■□□□□ 0.99
NOTCH3-201ENST00000263388 FOXD4L3Q6VB84 417 aaPredicted RBP21.26■□□□□ 0.99
NOTCH3-201ENST00000263388 AAMPQ13685 434 aa21.25■□□□□ 0.99
NOTCH3-201ENST00000263388 PATL2C9JE40 543 aaKnown RBP21.25■□□□□ 0.99
NOTCH3-201ENST00000263388 PRKRIP1Q9H875 184 aaPredicted RBP21.25■□□□□ 0.99
NOTCH3-201ENST00000263388 ZNF592Q92610 1267 aa21.25■□□□□ 0.99
NOTCH3-201ENST00000263388 NOL10Q9BSC4 688 aaKnown RBP21.25■□□□□ 0.99
NOTCH3-201ENST00000263388 NUCB2P80303 420 aa21.24■□□□□ 0.99
NOTCH3-201ENST00000263388 BCL2L13Q9BXK5 485 aa21.24■□□□□ 0.99
NOTCH3-201ENST00000263388 DHX57Q6P158 1386 aaKnown RBP21.24■□□□□ 0.99
NOTCH3-201ENST00000263388 HOMER1Q86YM7 354 aa21.23■□□□□ 0.99
NOTCH3-201ENST00000263388 PLIN1O60240 522 aa21.23■□□□□ 0.99
NOTCH3-201ENST00000263388 TEFQ10587 303 aa21.23■□□□□ 0.99
NOTCH3-201ENST00000263388 TDRD9Q8NDG6 1382 aaKnown RBP21.23■□□□□ 0.99
NOTCH3-201ENST00000263388 TRDNQ13061 729 aa21.22■□□□□ 0.99
NOTCH3-201ENST00000263388 AK7Q96M32 723 aa21.22■□□□□ 0.99
NOTCH3-201ENST00000263388 CPLX1O14810 134 aa21.22■□□□□ 0.99
NOTCH3-201ENST00000263388 CHMP5Q9NZZ3 219 aa21.22■□□□□ 0.99
NOTCH3-201ENST00000263388 CDR1P51861 262 aa21.22■□□□□ 0.99
NOTCH3-201ENST00000263388 INTS3Q68E01 1043 aaKnown RBP21.22■□□□□ 0.99
NOTCH3-201ENST00000263388 VGFO15240 615 aaPredicted RBP21.22■□□□□ 0.99
NOTCH3-201ENST00000263388 PCMTD1Q96MG8 357 aaPredicted RBP21.21■□□□□ 0.99
NOTCH3-201ENST00000263388 SASS6Q6UVJ0 657 aa21.2■□□□□ 0.98
NOTCH3-201ENST00000263388 ANO2Q9NQ90 1003 aa21.2■□□□□ 0.98
NOTCH3-201ENST00000263388 SUPT6HQ7KZ85 1726 aaKnown RBP21.2■□□□□ 0.98
NOTCH3-201ENST00000263388 IFIT2P09913 472 aaKnown RBP21.2■□□□□ 0.98
NOTCH3-201ENST00000263388 DDX58O95786 925 aaKnown RBP21.19■□□□□ 0.98
NOTCH3-201ENST00000263388 BICD2Q8TD16 824 aa21.19■□□□□ 0.98
NOTCH3-201ENST00000263388 RUFY1Q96T51 708 aa21.19■□□□□ 0.98
NOTCH3-201ENST00000263388 NAT10Q9H0A0 1025 aaKnown RBP21.19■□□□□ 0.98
NOTCH3-201ENST00000263388 COG6Q9Y2V7 657 aa21.19■□□□□ 0.98
NOTCH3-201ENST00000263388 TTC5Q8N0Z6 440 aa21.19■□□□□ 0.98
NOTCH3-201ENST00000263388 TRIM34Q9BYJ4 488 aa21.19■□□□□ 0.98
NOTCH3-201ENST00000263388 ACBD3Q9H3P7 528 aa21.19■□□□□ 0.98
NOTCH3-201ENST00000263388 DZIP1LQ8IYY4 767 aaKnown RBP21.18■□□□□ 0.98
NOTCH3-201ENST00000263388 VSIG10Q8N0Z9 540 aa21.18■□□□□ 0.98
NOTCH3-201ENST00000263388 EXOC6Q8TAG9 804 aa21.18■□□□□ 0.98
NOTCH3-201ENST00000263388 ARGLU1Q9NWB6 273 aaPredicted RBP21.18■□□□□ 0.98
NOTCH3-201ENST00000263388 NUTM2DQ5VT03 806 aaPredicted RBP21.17■□□□□ 0.98
NOTCH3-201ENST00000263388 MIA2Q96PC5 1412 aa21.17■□□□□ 0.98
NOTCH3-201ENST00000263388 MTERF4Q7Z6M4 381 aaKnown RBP21.17■□□□□ 0.98
NOTCH3-201ENST00000263388 API5Q9BZZ5 524 aaKnown RBP21.16■□□□□ 0.98
NOTCH3-201ENST00000263388 APPP05067 770 aa21.16■□□□□ 0.98
NOTCH3-201ENST00000263388 ERICH2A1L162 156 aa21.16■□□□□ 0.98
NOTCH3-201ENST00000263388 FAM43AQ8N2R8 423 aa21.16■□□□□ 0.98
NOTCH3-201ENST00000263388 NINLQ9Y2I6 1382 aa21.15■□□□□ 0.98
NOTCH3-201ENST00000263388 SLC4A3P48751 1232 aa21.15■□□□□ 0.98
NOTCH3-201ENST00000263388 VPS37DQ86XT2 251 aa21.15■□□□□ 0.98
NOTCH3-201ENST00000263388 ERC2O15083 957 aa21.15■□□□□ 0.98
NOTCH3-201ENST00000263388 CWC15Q9P013 229 aaKnown RBP21.15■□□□□ 0.98
NOTCH3-201ENST00000263388 SMC3Q9UQE7 1217 aa21.15■□□□□ 0.98
NOTCH3-201ENST00000263388 KIF21BO75037 1637 aa21.14■□□□□ 0.97
NOTCH3-201ENST00000263388 ELL2O00472 640 aaPredicted RBP21.13■□□□□ 0.97
NOTCH3-201ENST00000263388 SAFBQ15424 915 aaKnown RBP eCLIP21.13■□□□□ 0.97
NOTCH3-201ENST00000263388 EVA1CP58658 441 aa21.13■□□□□ 0.97
NOTCH3-201ENST00000263388 RUNDC1Q96C34 613 aa21.13■□□□□ 0.97
NOTCH3-201ENST00000263388 DCTN1Q14203 1278 aa21.12■□□□□ 0.97
NOTCH3-201ENST00000263388 HSP90AB4PQ58FF6 505 aa21.12■□□□□ 0.97
NOTCH3-201ENST00000263388 FAM13BQ9NYF5 915 aa21.12■□□□□ 0.97
NOTCH3-201ENST00000263388 MAP7D2Q96T17 732 aa21.12■□□□□ 0.97
NOTCH3-201ENST00000263388 G3BP1Q13283 466 aaKnown RBP eCLIP21.11■□□□□ 0.97
NOTCH3-201ENST00000263388 DIAPH1O60610 1272 aaKnown RBP21.11■□□□□ 0.97
NOTCH3-201ENST00000263388 MYOM3Q5VTT5 1437 aa21.11■□□□□ 0.97
NOTCH3-201ENST00000263388 NUTM2FA1L443 756 aa21.11■□□□□ 0.97
NOTCH3-201ENST00000263388 CCDC191Q8NCU4 936 aa21.11■□□□□ 0.97
NOTCH3-201ENST00000263388 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.11■□□□□ 0.97
NOTCH3-201ENST00000263388 CCDC73Q6ZRK6 1079 aa21.1■□□□□ 0.97
NOTCH3-201ENST00000263388 RIPK4P57078 832 aa21.1■□□□□ 0.97
NOTCH3-201ENST00000263388 NFXL1Q6ZNB6 911 aa21.1■□□□□ 0.97
NOTCH3-201ENST00000263388 HSP90B2PQ58FF3 399 aa21.1■□□□□ 0.97
NOTCH3-201ENST00000263388 IFT57Q9NWB7 429 aa21.1■□□□□ 0.97
NOTCH3-201ENST00000263388 APAF1O14727 1248 aa21.09■□□□□ 0.97
NOTCH3-201ENST00000263388 NASPP49321 788 aaPredicted RBP21.09■□□□□ 0.97
NOTCH3-201ENST00000263388 C22orf23Q9BZE7 217 aa21.09■□□□□ 0.97
NOTCH3-201ENST00000263388 LETM1O95202 739 aaPredicted RBP21.08■□□□□ 0.97
NOTCH3-201ENST00000263388 VPS37CA5D8V6 355 aaPredicted RBP21.08■□□□□ 0.96
NOTCH3-201ENST00000263388 CTDP1Q9Y5B0 961 aaPredicted RBP21.07■□□□□ 0.96
NOTCH3-201ENST00000263388 CCDC39Q9UFE4 941 aa21.07■□□□□ 0.96
NOTCH3-201ENST00000263388 CNTLNQ9NXG0 1405 aa21.07■□□□□ 0.96
NOTCH3-201ENST00000263388 OLFM4Q6UX06 510 aa21.07■□□□□ 0.96
NOTCH3-201ENST00000263388 EIF2S2P20042 333 aaKnown RBP21.07■□□□□ 0.96
NOTCH3-201ENST00000263388 BRMS1Q9HCU9 246 aa21.06■□□□□ 0.96
NOTCH3-201ENST00000263388 EPS15P42566 896 aa21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms