RNA–Protein interactions for RNA: ENST00000263351.9

ZNF541-201, Transcript of zinc finger protein 541, humanhuman

TSL 1 (best)

Gene ZNF541, Length 2,573 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541-201ENST00000263351 CHD1O14646 1710 aa21.63■■□□□ 1.05
ZNF541-201ENST00000263351 NEUROD2Q15784 382 aa21.63■■□□□ 1.05
ZNF541-201ENST00000263351 SLFN5Q08AF3 891 aa21.63■■□□□ 1.05
ZNF541-201ENST00000263351 LAMC1P11047 1609 aa21.62■■□□□ 1.05
ZNF541-201ENST00000263351 MADDQ8WXG6 1647 aa21.62■■□□□ 1.05
ZNF541-201ENST00000263351 RNF17Q9BXT8 1623 aaKnown RBP21.62■■□□□ 1.05
ZNF541-201ENST00000263351 CARD14Q9BXL6 1004 aa21.62■■□□□ 1.05
ZNF541-201ENST00000263351 UGGT1Q9NYU2 1555 aa21.62■■□□□ 1.05
ZNF541-201ENST00000263351 DUOX2Q9NRD8 1548 aa21.62■■□□□ 1.05
ZNF541-201ENST00000263351 EIF2AK4Q9P2K8 1649 aaKnown RBP21.62■■□□□ 1.05
ZNF541-201ENST00000263351 RRP7AQ9Y3A4 280 aaKnown RBP21.61■■□□□ 1.05
ZNF541-201ENST00000263351 PLXNC1O60486 1568 aa21.6■■□□□ 1.05
ZNF541-201ENST00000263351 IGHDP01880 384 aa21.6■■□□□ 1.05
ZNF541-201ENST00000263351 ATP10AO60312 1499 aa21.6■■□□□ 1.05
ZNF541-201ENST00000263351 ANO8Q9HCE9 1232 aaPredicted RBP21.59■■□□□ 1.05
ZNF541-201ENST00000263351 TNNQ9UQP3 1299 aa21.59■■□□□ 1.05
ZNF541-201ENST00000263351 ADGRF5Q8IZF2 1346 aa21.59■■□□□ 1.05
ZNF541-201ENST00000263351 NFKBIBQ15653 356 aa21.59■■□□□ 1.05
ZNF541-201ENST00000263351 SPAG9O60271 1321 aaKnown RBP21.58■■□□□ 1.05
ZNF541-201ENST00000263351 CENPQQ7L2Z9 268 aaPredicted RBP21.58■■□□□ 1.05
ZNF541-201ENST00000263351 EFCAB2Q5VUJ9 269 aa21.58■■□□□ 1.04
ZNF541-201ENST00000263351 PANK1Q8TE04 598 aa21.58■■□□□ 1.04
ZNF541-201ENST00000263351 BRPF3Q9ULD4 1205 aa21.58■■□□□ 1.04
ZNF541-201ENST00000263351 IQGAP1P46940 1657 aa21.57■■□□□ 1.04
ZNF541-201ENST00000263351 CLTCL1P53675 1640 aa21.57■■□□□ 1.04
ZNF541-201ENST00000263351 KIF3BO15066 747 aa21.55■■□□□ 1.04
ZNF541-201ENST00000263351 ASXL1Q8IXJ9 1541 aa21.55■■□□□ 1.04
ZNF541-201ENST00000263351 MYOM1P52179 1685 aa21.55■■□□□ 1.04
ZNF541-201ENST00000263351 SEC24BO95487 1268 aa21.55■■□□□ 1.04
ZNF541-201ENST00000263351 SCAF11Q99590 1463 aaKnown RBP21.55■■□□□ 1.04
ZNF541-201ENST00000263351 PLCH2O75038 1416 aa21.54■■□□□ 1.04
ZNF541-201ENST00000263351 FAM161AQ3B820 660 aa21.54■■□□□ 1.04
ZNF541-201ENST00000263351 BCL2L13Q9BXK5 485 aa21.54■■□□□ 1.04
ZNF541-201ENST00000263351 COG6Q9Y2V7 657 aa21.54■■□□□ 1.04
ZNF541-201ENST00000263351 ABCC2Q92887 1545 aa21.53■■□□□ 1.04
ZNF541-201ENST00000263351 FRAT1Q92837 279 aaPredicted RBP21.52■■□□□ 1.04
ZNF541-201ENST00000263351 FRAT2O75474 233 aaPredicted RBP21.51■■□□□ 1.03
ZNF541-201ENST00000263351 CHGAP10645 457 aaKnown RBP21.51■■□□□ 1.03
ZNF541-201ENST00000263351 PPM1GO15355 546 aaPredicted RBP21.51■■□□□ 1.03
ZNF541-201ENST00000263351 TRMT2AQ8IZ69 625 aaKnown RBP21.51■■□□□ 1.03
ZNF541-201ENST00000263351 INSRP06213 1382 aa21.5■■□□□ 1.03
ZNF541-201ENST00000263351 ABCC1P33527 1531 aa21.5■■□□□ 1.03
ZNF541-201ENST00000263351 NUTM2DQ5VT03 806 aaPredicted RBP21.49■■□□□ 1.03
ZNF541-201ENST00000263351 DDRGK1Q96HY6 314 aa21.49■■□□□ 1.03
ZNF541-201ENST00000263351 SYNMO15061 1565 aa21.48■■□□□ 1.03
ZNF541-201ENST00000263351 SPHKAPQ2M3C7 1700 aa21.48■■□□□ 1.03
ZNF541-201ENST00000263351 DAXXQ9UER7 740 aaPredicted RBP21.47■■□□□ 1.03
ZNF541-201ENST00000263351 ZCCHC11Q5TAX3 1644 aaKnown RBP21.47■■□□□ 1.03
ZNF541-201ENST00000263351 TRAK1Q9UPV9 953 aa21.47■■□□□ 1.03
ZNF541-201ENST00000263351 PIK3C2GO75747 1445 aa21.47■■□□□ 1.03
ZNF541-201ENST00000263351 ERVK-7P63135 1459 aa21.47■■□□□ 1.03
ZNF541-201ENST00000263351 NKTRP30414 1462 aaKnown RBP21.46■■□□□ 1.03
ZNF541-201ENST00000263351 TMEM132EQ6IEE7 984 aa21.46■■□□□ 1.03
ZNF541-201ENST00000263351 SLC12A5Q9H2X9 1139 aa21.46■■□□□ 1.03
ZNF541-201ENST00000263351 TRPM2O94759 1503 aa21.46■■□□□ 1.03
ZNF541-201ENST00000263351 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.46■■□□□ 1.03
ZNF541-201ENST00000263351 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.46■■□□□ 1.03
ZNF541-201ENST00000263351 CLUAP1Q96AJ1 413 aa21.45■■□□□ 1.03
ZNF541-201ENST00000263351 CANXP27824 592 aaKnown RBP21.44■■□□□ 1.02
ZNF541-201ENST00000263351 CDCA8Q53HL2 280 aa21.44■■□□□ 1.02
ZNF541-201ENST00000263351 USP35Q9P2H5 1018 aa21.44■■□□□ 1.02
ZNF541-201ENST00000263351 RLBP1P12271 317 aa21.44■■□□□ 1.02
ZNF541-201ENST00000263351 WWC1Q8IX03 1113 aa21.44■■□□□ 1.02
ZNF541-201ENST00000263351 SCAPERQ9BY12 1400 aa21.44■■□□□ 1.02
ZNF541-201ENST00000263351 USP19O94966 1318 aa21.44■■□□□ 1.02
ZNF541-201ENST00000263351 CFAP65Q6ZU64 1925 aaKnown RBP21.43■■□□□ 1.02
ZNF541-201ENST00000263351 GSE1Q14687 1217 aa21.43■■□□□ 1.02
ZNF541-201ENST00000263351 ZFYVE16Q7Z3T8 1539 aa21.43■■□□□ 1.02
ZNF541-201ENST00000263351 CEP152O94986 1710 aa21.42■■□□□ 1.02
ZNF541-201ENST00000263351 PTPRTO14522 1441 aa21.42■■□□□ 1.02
ZNF541-201ENST00000263351 SHROOM2Q13796 1616 aa21.41■■□□□ 1.02
ZNF541-201ENST00000263351 E9PSI1 815 aa21.41■■□□□ 1.02
ZNF541-201ENST00000263351 CENPJQ9HC77 1338 aaPredicted RBP21.4■■□□□ 1.02
ZNF541-201ENST00000263351 KDM5AP29375 1690 aaKnown RBP21.39■■□□□ 1.02
ZNF541-201ENST00000263351 SLKQ9H2G2 1235 aaPredicted RBP21.39■■□□□ 1.01
ZNF541-201ENST00000263351 ABCA6Q8N139 1617 aa21.39■■□□□ 1.01
ZNF541-201ENST00000263351 SAFB2Q14151 953 aaKnown RBP eCLIP21.38■■□□□ 1.01
ZNF541-201ENST00000263351 PCDHB15Q9Y5E8 787 aa21.38■■□□□ 1.01
ZNF541-201ENST00000263351 EIF3AQ14152 1382 aaKnown RBP21.37■■□□□ 1.01
ZNF541-201ENST00000263351 NSD3Q9BZ95 1437 aa21.37■■□□□ 1.01
ZNF541-201ENST00000263351 CLASP1Q7Z460 1538 aa21.36■■□□□ 1.01
ZNF541-201ENST00000263351 MORC1Q86VD1 984 aa21.36■■□□□ 1.01
ZNF541-201ENST00000263351 TCP11L2Q8N4U5 519 aa21.36■■□□□ 1.01
ZNF541-201ENST00000263351 SPRYD3Q8NCJ5 442 aa21.35■■□□□ 1.01
ZNF541-201ENST00000263351 NOS1P29475 1434 aa21.34■■□□□ 1.01
ZNF541-201ENST00000263351 MROH2AA6NES4 1674 aa21.33■■□□□ 1.01
ZNF541-201ENST00000263351 MTHFSP49914 203 aa21.33■■□□□ 1
ZNF541-201ENST00000263351 RARSP54136 660 aaKnown RBP21.32■■□□□ 1
ZNF541-201ENST00000263351 ARXQ96QS3 562 aa21.32■■□□□ 1
ZNF541-201ENST00000263351 NPC1L1Q9UHC9 1359 aa21.31■■□□□ 1
ZNF541-201ENST00000263351 ATP7AQ04656 1500 aa21.31■■□□□ 1
ZNF541-201ENST00000263351 KANK1Q14678 1352 aa21.3■■□□□ 1
ZNF541-201ENST00000263351 TET3O43151 1660 aa21.3■■□□□ 1
ZNF541-201ENST00000263351 FANCAO15360 1455 aa21.3■■□□□ 1
ZNF541-201ENST00000263351 MAP3K4Q9Y6R4 1608 aa21.3■■□□□ 1
ZNF541-201ENST00000263351 GGT6Q6P531 493 aa21.3■■□□□ 1
ZNF541-201ENST00000263351 TSR2Q969E8 191 aaKnown RBP21.3■■□□□ 1
ZNF541-201ENST00000263351 POGKQ9P215 609 aa21.3■■□□□ 1
ZNF541-201ENST00000263351 DEPDC5O75140 1603 aa21.27■■□□□ 1
ZNF541-201ENST00000263351 MROH1Q8NDA8 1641 aa21.27■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms