RNA–Protein interactions for RNA: ENST00000263202.14

UFD1-201, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UFD1, Length 1,814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-201ENST00000263202 UBR1Q8IWV7 1749 aa32.17■■■□□ 2.74
UFD1-201ENST00000263202 STAG3Q9UJ98 1225 aa32.16■■■□□ 2.74
UFD1-201ENST00000263202 KIAA1210Q9ULL0 1709 aa32.16■■■□□ 2.74
UFD1-201ENST00000263202 PLPPR3Q6T4P5 718 aa32.16■■■□□ 2.74
UFD1-201ENST00000263202 ADGRF5Q8IZF2 1346 aa32.15■■■□□ 2.74
UFD1-201ENST00000263202 LAMC1P11047 1609 aa32.12■■■□□ 2.73
UFD1-201ENST00000263202 ROCK2O75116 1388 aaKnown RBP32.12■■■□□ 2.73
UFD1-201ENST00000263202 MYO3AQ8NEV4 1616 aa32.12■■■□□ 2.73
UFD1-201ENST00000263202 EIF4G2P78344 907 aaKnown RBP eCLIP32.1■■■□□ 2.73
UFD1-201ENST00000263202 GPRASP1Q5JY77 1395 aa32.1■■■□□ 2.73
UFD1-201ENST00000263202 ZFYVE9O95405 1425 aa32.1■■■□□ 2.73
UFD1-201ENST00000263202 NBPF1Q3BBV0 1214 aa32.1■■■□□ 2.73
UFD1-201ENST00000263202 VGFO15240 615 aaPredicted RBP32.08■■■□□ 2.73
UFD1-201ENST00000263202 CARD11Q9BXL7 1154 aa32.08■■■□□ 2.73
UFD1-201ENST00000263202 PIK3C2GO75747 1445 aa32.08■■■□□ 2.73
UFD1-201ENST00000263202 HSPA5P11021 654 aaKnown RBP32.07■■■□□ 2.73
UFD1-201ENST00000263202 HIRIP3Q9BW71 556 aaPredicted RBP32.07■■■□□ 2.72
UFD1-201ENST00000263202 NUTM2DQ5VT03 806 aaPredicted RBP32.05■■■□□ 2.72
UFD1-201ENST00000263202 PTPRMP28827 1452 aa32.05■■■□□ 2.72
UFD1-201ENST00000263202 RIMS2Q9UQ26 1411 aa32.04■■■□□ 2.72
UFD1-201ENST00000263202 USP47Q96K76 1375 aa32.03■■■□□ 2.72
UFD1-201ENST00000263202 SETD1BQ9UPS6 1966 aaKnown RBP32.01■■■□□ 2.71
UFD1-201ENST00000263202 CFAP70Q5T0N1 1121 aa32■■■□□ 2.71
UFD1-201ENST00000263202 CEP170BQ9Y4F5 1589 aaPredicted RBP31.98■■■□□ 2.71
UFD1-201ENST00000263202 IQGAP1P46940 1657 aa31.98■■■□□ 2.71
UFD1-201ENST00000263202 ZNF142P52746 1687 aaPredicted RBP31.98■■■□□ 2.71
UFD1-201ENST00000263202 SETBP1Q9Y6X0 1596 aa31.97■■■□□ 2.71
UFD1-201ENST00000263202 TMEM2Q9UHN6 1383 aa31.96■■■□□ 2.71
UFD1-201ENST00000263202 C14orf93Q9H972 538 aaKnown RBP31.96■■■□□ 2.71
UFD1-201ENST00000263202 ABCF1Q8NE71 845 aaKnown RBP eCLIP31.93■■■□□ 2.7
UFD1-201ENST00000263202 SLIT1O75093 1534 aa31.92■■■□□ 2.7
UFD1-201ENST00000263202 ADGRB1O14514 1584 aa31.91■■■□□ 2.7
UFD1-201ENST00000263202 ARHGAP23Q9P227 1491 aa31.9■■■□□ 2.7
UFD1-201ENST00000263202 HDGFP51858 240 aaKnown RBP31.9■■■□□ 2.7
UFD1-201ENST00000263202 SCAF11Q99590 1463 aaKnown RBP31.89■■■□□ 2.7
UFD1-201ENST00000263202 POLR1AO95602 1720 aaPredicted RBP31.88■■■□□ 2.69
UFD1-201ENST00000263202 THEMISQ8N1K5 641 aaPredicted RBP31.88■■■□□ 2.69
UFD1-201ENST00000263202 ALKQ9UM73 1620 aa31.88■■■□□ 2.69
UFD1-201ENST00000263202 NRXN3Q9Y4C0 1643 aa31.87■■■□□ 2.69
UFD1-201ENST00000263202 ST20-MTHFSA0A0A6YYL1 179 aa31.86■■■□□ 2.69
UFD1-201ENST00000263202 SETD1AO15047 1707 aaKnown RBP31.85■■■□□ 2.69
UFD1-201ENST00000263202 KDM4FA0A1W2PPD8 638 aa31.84■■■□□ 2.69
UFD1-201ENST00000263202 ASXL1Q8IXJ9 1541 aa31.83■■■□□ 2.69
UFD1-201ENST00000263202 SENP3Q9H4L4 574 aaPredicted RBP31.83■■■□□ 2.69
UFD1-201ENST00000263202 LTKP29376 864 aa31.81■■■□□ 2.68
UFD1-201ENST00000263202 TMEM132EQ6IEE7 984 aa31.81■■■□□ 2.68
UFD1-201ENST00000263202 TXNDC2Q86VQ3 553 aa31.79■■■□□ 2.68
UFD1-201ENST00000263202 C11orf95C9JLR9 678 aaPredicted RBP31.78■■■□□ 2.68
UFD1-201ENST00000263202 EID1Q9Y6B2 187 aa31.78■■■□□ 2.68
UFD1-201ENST00000263202 PLEKHG1Q9ULL1 1385 aa31.77■■■□□ 2.68
UFD1-201ENST00000263202 DIEXFQ68CQ4 756 aaKnown RBP31.77■■■□□ 2.68
UFD1-201ENST00000263202 EIF3AQ14152 1382 aaKnown RBP31.76■■■□□ 2.68
UFD1-201ENST00000263202 WASHC2AQ641Q2 1341 aa31.76■■■□□ 2.67
UFD1-201ENST00000263202 ARHGEF28Q8N1W1 1705 aaKnown RBP31.74■■■□□ 2.67
UFD1-201ENST00000263202 CCDC7Q96M83 1385 aa31.72■■■□□ 2.67
UFD1-201ENST00000263202 TESK2Q96S53 571 aa31.72■■■□□ 2.67
UFD1-201ENST00000263202 TRAK1Q9UPV9 953 aa31.7■■■□□ 2.67
UFD1-201ENST00000263202 ADAMTS13Q76LX8 1427 aa31.7■■■□□ 2.66
UFD1-201ENST00000263202 KIF7Q2M1P5 1343 aa31.69■■■□□ 2.66
UFD1-201ENST00000263202 YTHDC2Q9H6S0 1430 aaKnown RBP31.69■■■□□ 2.66
UFD1-201ENST00000263202 BCANQ96GW7 911 aa31.68■■■□□ 2.66
UFD1-201ENST00000263202 MED14O60244 1454 aa31.66■■■□□ 2.66
UFD1-201ENST00000263202 DDX10Q13206 875 aaKnown RBP31.66■■■□□ 2.66
UFD1-201ENST00000263202 QRICH2Q9H0J4 1663 aa31.66■■■□□ 2.66
UFD1-201ENST00000263202 METP08581 1390 aa31.65■■■□□ 2.66
UFD1-201ENST00000263202 ANKLE2Q86XL3 938 aa31.63■■■□□ 2.65
UFD1-201ENST00000263202 DIP2AQ14689 1571 aa31.62■■■□□ 2.65
UFD1-201ENST00000263202 STK26Q9P289 416 aa31.62■■■□□ 2.65
UFD1-201ENST00000263202 CENPJQ9HC77 1338 aaPredicted RBP31.62■■■□□ 2.65
UFD1-201ENST00000263202 LRPPRCP42704 1394 aaKnown RBP31.61■■■□□ 2.65
UFD1-201ENST00000263202 KNDC1Q76NI1 1749 aa31.6■■■□□ 2.65
UFD1-201ENST00000263202 DISP3Q9P2K9 1392 aa31.6■■■□□ 2.65
UFD1-201ENST00000263202 DLC1Q96QB1 1528 aa31.59■■■□□ 2.65
UFD1-201ENST00000263202 SBNO2Q9Y2G9 1366 aa31.59■■■□□ 2.65
UFD1-201ENST00000263202 TMF1P82094 1093 aa31.59■■■□□ 2.65
UFD1-201ENST00000263202 SLC26A8Q96RN1 970 aa31.57■■■□□ 2.64
UFD1-201ENST00000263202 TBX22Q9Y458 520 aa31.56■■■□□ 2.64
UFD1-201ENST00000263202 ABCC11Q96J66 1382 aa31.56■■■□□ 2.64
UFD1-201ENST00000263202 SLC24A1O60721 1099 aa31.54■■■□□ 2.64
UFD1-201ENST00000263202 POLR3GLQ9BT43 218 aa31.52■■■□□ 2.64
UFD1-201ENST00000263202 TECPR2O15040 1411 aa31.52■■■□□ 2.64
UFD1-201ENST00000263202 CPS1P31327 1500 aa31.51■■■□□ 2.64
UFD1-201ENST00000263202 PRAM1Q96QH2 718 aa31.49■■■□□ 2.63
UFD1-201ENST00000263202 LMTK3Q96Q04 1460 aa31.49■■■□□ 2.63
UFD1-201ENST00000263202 NPHP4O75161 1426 aaPredicted RBP31.49■■■□□ 2.63
UFD1-201ENST00000263202 PTPRUQ92729 1446 aa31.49■■■□□ 2.63
UFD1-201ENST00000263202 NCKAP5LQ9HCH0 1330 aa31.46■■■□□ 2.63
UFD1-201ENST00000263202 POGKQ9P215 609 aa31.46■■■□□ 2.63
UFD1-201ENST00000263202 CDCA8Q53HL2 280 aa31.45■■■□□ 2.63
UFD1-201ENST00000263202 SIRT1Q96EB6 747 aa31.45■■■□□ 2.62
UFD1-201ENST00000263202 FAM135BQ49AJ0 1406 aa31.44■■■□□ 2.62
UFD1-201ENST00000263202 SAFB2Q14151 953 aaKnown RBP eCLIP31.44■■■□□ 2.62
UFD1-201ENST00000263202 PIK3R4Q99570 1358 aa31.43■■■□□ 2.62
UFD1-201ENST00000263202 XRN1Q8IZH2 1706 aaKnown RBP31.43■■■□□ 2.62
UFD1-201ENST00000263202 TULP4Q9NRJ4 1543 aa31.42■■■□□ 2.62
UFD1-201ENST00000263202 CHD2O14647 1828 aaKnown RBP31.42■■■□□ 2.62
UFD1-201ENST00000263202 PLEKHH1Q9ULM0 1364 aa31.42■■■□□ 2.62
UFD1-201ENST00000263202 WAPLQ7Z5K2 1190 aa31.42■■■□□ 2.62
UFD1-201ENST00000263202 MYOM1P52179 1685 aa31.41■■■□□ 2.62
UFD1-201ENST00000263202 HSPA2P54652 639 aa31.4■■■□□ 2.62
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms