RNA–Protein interactions for RNA: ENST00000262795.5

SHANK3-201, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS P5 TSL 5 BASIC

Gene SHANK3, Length 7,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-201ENST00000262795 NFXL1Q6ZNB6 911 aa19.61■□□□□ 0.73
SHANK3-201ENST00000262795 HTATSF1O43719 755 aaKnown RBP19.6■□□□□ 0.73
SHANK3-201ENST00000262795 RIC3Q7Z5B4 369 aa19.6■□□□□ 0.73
SHANK3-201ENST00000262795 BICDL1Q6ZP65 573 aa19.6■□□□□ 0.73
SHANK3-201ENST00000262795 VGFO15240 615 aaPredicted RBP19.59■□□□□ 0.73
SHANK3-201ENST00000262795 HMOX1P09601 288 aa19.59■□□□□ 0.73
SHANK3-201ENST00000262795 PCMTD1Q96MG8 357 aaPredicted RBP19.59■□□□□ 0.73
SHANK3-201ENST00000262795 NEUROD6Q96NK8 337 aa19.59■□□□□ 0.73
SHANK3-201ENST00000262795 RWDD1Q9H446 243 aaPredicted RBP19.59■□□□□ 0.73
SHANK3-201ENST00000262795 ABTB2Q8N961 1025 aa19.59■□□□□ 0.73
SHANK3-201ENST00000262795 FAM184AQ8NB25 1140 aa19.58■□□□□ 0.73
SHANK3-201ENST00000262795 CCDC34Q96HJ3 373 aa19.58■□□□□ 0.73
SHANK3-201ENST00000262795 SLKQ9H2G2 1235 aaPredicted RBP19.58■□□□□ 0.73
SHANK3-201ENST00000262795 PTPRGP23470 1445 aa19.58■□□□□ 0.73
SHANK3-201ENST00000262795 FHOD3Q2V2M9 1422 aa19.58■□□□□ 0.72
SHANK3-201ENST00000262795 PDE3BQ13370 1112 aa19.58■□□□□ 0.72
SHANK3-201ENST00000262795 KIF16BQ96L93 1317 aa19.57■□□□□ 0.72
SHANK3-201ENST00000262795 ADAMTS2O95450 1211 aa19.57■□□□□ 0.72
SHANK3-201ENST00000262795 TOM1L2Q6ZVM7 507 aa19.57■□□□□ 0.72
SHANK3-201ENST00000262795 ZNF219Q9P2Y4 722 aaPredicted RBP19.56■□□□□ 0.72
SHANK3-201ENST00000262795 EVC2Q86UK5 1308 aa19.56■□□□□ 0.72
SHANK3-201ENST00000262795 TXNDC2Q86VQ3 553 aa19.55■□□□□ 0.72
SHANK3-201ENST00000262795 WDR70Q9NW82 654 aa19.55■□□□□ 0.72
SHANK3-201ENST00000262795 R3HCC1Q9Y3T6 440 aaKnown RBP19.55■□□□□ 0.72
SHANK3-201ENST00000262795 BAZ1AQ9NRL2 1556 aaPredicted RBP19.54■□□□□ 0.72
SHANK3-201ENST00000262795 CALRP27797 417 aaKnown RBP19.54■□□□□ 0.72
SHANK3-201ENST00000262795 NLRP6P59044 892 aa19.54■□□□□ 0.72
SHANK3-201ENST00000262795 CHMP4CQ96CF2 233 aa19.54■□□□□ 0.72
SHANK3-201ENST00000262795 TIMELESSQ9UNS1 1208 aa19.53■□□□□ 0.72
SHANK3-201ENST00000262795 KIF6Q6ZMV9 814 aa19.53■□□□□ 0.72
SHANK3-201ENST00000262795 VSIG10Q8N0Z9 540 aa19.52■□□□□ 0.71
SHANK3-201ENST00000262795 ERICH2A1L162 156 aa19.51■□□□□ 0.71
SHANK3-201ENST00000262795 IFIT2P09913 472 aaKnown RBP19.51■□□□□ 0.71
SHANK3-201ENST00000262795 ANKRD45Q5TZF3 282 aa19.51■□□□□ 0.71
SHANK3-201ENST00000262795 DDX58O95786 925 aaKnown RBP19.51■□□□□ 0.71
SHANK3-201ENST00000262795 PPM1FP49593 454 aaPredicted RBP19.51■□□□□ 0.71
SHANK3-201ENST00000262795 SETD5Q9C0A6 1442 aa19.51■□□□□ 0.71
SHANK3-201ENST00000262795 TTLL12Q14166 644 aaPredicted RBP19.5■□□□□ 0.71
SHANK3-201ENST00000262795 WASHC4Q2M389 1173 aa19.5■□□□□ 0.71
SHANK3-201ENST00000262795 TNIKQ9UKE5 1360 aa19.5■□□□□ 0.71
SHANK3-201ENST00000262795 TRIM29Q14134 588 aa19.5■□□□□ 0.71
SHANK3-201ENST00000262795 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.5■□□□□ 0.71
SHANK3-201ENST00000262795 TSPYL4Q9UJ04 414 aa19.5■□□□□ 0.71
SHANK3-201ENST00000262795 PANK3Q9H999 370 aa19.5■□□□□ 0.71
SHANK3-201ENST00000262795 RCAN3Q9UKA8 241 aa19.5■□□□□ 0.71
SHANK3-201ENST00000262795 WWC2Q6AWC2 1192 aa19.49■□□□□ 0.71
SHANK3-201ENST00000262795 FKBP5Q13451 457 aaPredicted RBP19.49■□□□□ 0.71
SHANK3-201ENST00000262795 CABP2Q9NPB3 220 aa19.49■□□□□ 0.71
SHANK3-201ENST00000262795 WASHC2AQ641Q2 1341 aa19.48■□□□□ 0.71
SHANK3-201ENST00000262795 DIAPH3Q9NSV4 1193 aa19.48■□□□□ 0.71
SHANK3-201ENST00000262795 TMEM132EQ6IEE7 984 aa19.48■□□□□ 0.71
SHANK3-201ENST00000262795 WWC3Q9ULE0 1092 aa19.48■□□□□ 0.71
SHANK3-201ENST00000262795 CENPJQ9HC77 1338 aaPredicted RBP19.47■□□□□ 0.71
SHANK3-201ENST00000262795 ANO2Q9NQ90 1003 aa19.47■□□□□ 0.71
SHANK3-201ENST00000262795 G3BP1Q13283 466 aaKnown RBP eCLIP19.46■□□□□ 0.71
SHANK3-201ENST00000262795 CGNL1Q0VF96 1302 aa19.46■□□□□ 0.71
SHANK3-201ENST00000262795 GPRASP1Q5JY77 1395 aa19.46■□□□□ 0.71
SHANK3-201ENST00000262795 TPM2P07951 284 aa19.46■□□□□ 0.71
SHANK3-201ENST00000262795 ZFYVE27Q5T4F4 411 aa19.45■□□□□ 0.7
SHANK3-201ENST00000262795 TPM3P06753 285 aa19.45■□□□□ 0.7
SHANK3-201ENST00000262795 SPDYE4A6NLX3 237 aa19.45■□□□□ 0.7
SHANK3-201ENST00000262795 TRDNQ13061 729 aa19.45■□□□□ 0.7
SHANK3-201ENST00000262795 ECM2O94769 699 aaPredicted RBP19.44■□□□□ 0.7
SHANK3-201ENST00000262795 ZSCAN29Q8IWY8 852 aaPredicted RBP19.44■□□□□ 0.7
SHANK3-201ENST00000262795 PATL2C9JE40 543 aaKnown RBP19.44■□□□□ 0.7
SHANK3-201ENST00000262795 CCDC18Q5T9S5 1454 aa19.44■□□□□ 0.7
SHANK3-201ENST00000262795 CCDC144AA2RUR9 1427 aa19.44■□□□□ 0.7
SHANK3-201ENST00000262795 TSR1Q2NL82 804 aaKnown RBP19.43■□□□□ 0.7
SHANK3-201ENST00000262795 CPLX1O14810 134 aa19.42■□□□□ 0.7
SHANK3-201ENST00000262795 SPINK5Q9NQ38 1064 aaPredicted RBP19.42■□□□□ 0.7
SHANK3-201ENST00000262795 FMN1Q68DA7 1419 aa19.42■□□□□ 0.7
SHANK3-201ENST00000262795 CCAR2Q8N163 923 aaKnown RBP19.41■□□□□ 0.7
SHANK3-201ENST00000262795 RRP12Q5JTH9 1297 aaKnown RBP19.41■□□□□ 0.7
SHANK3-201ENST00000262795 DIAPH1O60610 1272 aaKnown RBP19.41■□□□□ 0.7
SHANK3-201ENST00000262795 LRRFIP1Q32MZ4 808 aaKnown RBP19.41■□□□□ 0.7
SHANK3-201ENST00000262795 CCDC88BA6NC98 1476 aa19.4■□□□□ 0.7
SHANK3-201ENST00000262795 RIPK4P57078 832 aa19.4■□□□□ 0.7
SHANK3-201ENST00000262795 RALBP1Q15311 655 aa19.4■□□□□ 0.7
SHANK3-201ENST00000262795 CABP4P57796 275 aa19.4■□□□□ 0.7
SHANK3-201ENST00000262795 L3MBTL2Q969R5 705 aa19.4■□□□□ 0.7
SHANK3-201ENST00000262795 CNNM1Q9NRU3 951 aa19.39■□□□□ 0.7
SHANK3-201ENST00000262795 GGNBP2Q9H3C7 697 aa19.39■□□□□ 0.69
SHANK3-201ENST00000262795 ODF2Q5BJF6 829 aa19.38■□□□□ 0.69
SHANK3-201ENST00000262795 ST20-MTHFSA0A0A6YYL1 179 aa19.38■□□□□ 0.69
SHANK3-201ENST00000262795 GBP4Q96PP9 640 aa19.38■□□□□ 0.69
SHANK3-201ENST00000262795 CT47A1Q5JQC4 288 aaPredicted RBP19.38■□□□□ 0.69
SHANK3-201ENST00000262795 MYL6BP14649 208 aa19.37■□□□□ 0.69
SHANK3-201ENST00000262795 SLC26A8Q96RN1 970 aa19.37■□□□□ 0.69
SHANK3-201ENST00000262795 PLCD3Q8N3E9 789 aa19.36■□□□□ 0.69
SHANK3-201ENST00000262795 MPHOSPH10O00566 681 aaKnown RBP19.36■□□□□ 0.69
SHANK3-201ENST00000262795 UACAQ9BZF9 1416 aa19.36■□□□□ 0.69
SHANK3-201ENST00000262795 NGLY1Q96IV0 654 aa19.36■□□□□ 0.69
SHANK3-201ENST00000262795 KIF3AQ9Y496 699 aa19.36■□□□□ 0.69
SHANK3-201ENST00000262795 DNAJC2Q99543 621 aaKnown RBP19.35■□□□□ 0.69
SHANK3-201ENST00000262795 HSP90AA2PQ14568 343 aaPredicted RBP19.35■□□□□ 0.69
SHANK3-201ENST00000262795 RSPH4AQ5TD94 716 aa19.35■□□□□ 0.69
SHANK3-201ENST00000262795 WDR78Q5VTH9 848 aa19.35■□□□□ 0.69
SHANK3-201ENST00000262795 PTMSP20962 102 aa19.35■□□□□ 0.69
SHANK3-201ENST00000262795 PRDM11Q9NQV5 511 aa19.34■□□□□ 0.69
SHANK3-201ENST00000262795 TATP17735 454 aaPredicted RBP19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms