RNA–Protein interactions for RNA: ENST00000262675.11

TTC39A-201, Transcript of tetratricopeptide repeat domain 39A, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TTC39A, Length 2,173 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-201ENST00000262675 CHIC2Q9UKJ5 165 aa14.23□□□□□ -0.13
TTC39A-201ENST00000262675 TMEM94Q12767 1356 aa14.23□□□□□ -0.13
TTC39A-201ENST00000262675 GCC2Q8IWJ2 1684 aa14.23□□□□□ -0.13
TTC39A-201ENST00000262675 ANKRD50Q9ULJ7 1429 aa14.22□□□□□ -0.13
TTC39A-201ENST00000262675 PROSER2Q86WR7 435 aaPredicted RBP14.22□□□□□ -0.13
TTC39A-201ENST00000262675 MSH6P52701 1360 aa14.2□□□□□ -0.14
TTC39A-201ENST00000262675 PLEKHG1Q9ULL1 1385 aa14.2□□□□□ -0.14
TTC39A-201ENST00000262675 NCOA3Q9Y6Q9 1424 aa14.2□□□□□ -0.14
TTC39A-201ENST00000262675 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.2□□□□□ -0.14
TTC39A-201ENST00000262675 ROBO1Q9Y6N7 1651 aa14.19□□□□□ -0.14
TTC39A-201ENST00000262675 UNC13BO14795 1591 aa14.19□□□□□ -0.14
TTC39A-201ENST00000262675 ZFYVE9O95405 1425 aa14.18□□□□□ -0.14
TTC39A-201ENST00000262675 CHD2O14647 1828 aaKnown RBP14.18□□□□□ -0.14
TTC39A-201ENST00000262675 FAM50AQ14320 339 aaKnown RBP14.18□□□□□ -0.14
TTC39A-201ENST00000262675 BCANQ96GW7 911 aa14.18□□□□□ -0.14
TTC39A-201ENST00000262675 DIP2AQ14689 1571 aa14.18□□□□□ -0.14
TTC39A-201ENST00000262675 SLC26A8Q96RN1 970 aa14.17□□□□□ -0.14
TTC39A-201ENST00000262675 TMEM131LA2VDJ0 1609 aa14.17□□□□□ -0.14
TTC39A-201ENST00000262675 ROCK1Q13464 1354 aa14.17□□□□□ -0.14
TTC39A-201ENST00000262675 RIMS2Q9UQ26 1411 aa14.17□□□□□ -0.14
TTC39A-201ENST00000262675 PPP1R15AO75807 674 aaPredicted RBP14.16□□□□□ -0.14
TTC39A-201ENST00000262675 TBX22Q9Y458 520 aa14.16□□□□□ -0.14
TTC39A-201ENST00000262675 PIK3R4Q99570 1358 aa14.15□□□□□ -0.14
TTC39A-201ENST00000262675 MYO5BQ9ULV0 1848 aa14.15□□□□□ -0.14
TTC39A-201ENST00000262675 SENP3Q9H4L4 574 aaPredicted RBP14.15□□□□□ -0.14
TTC39A-201ENST00000262675 IQGAP3Q86VI3 1631 aa14.14□□□□□ -0.15
TTC39A-201ENST00000262675 PHLPP1O60346 1717 aa14.13□□□□□ -0.15
TTC39A-201ENST00000262675 SLAIN2Q9P270 581 aa14.13□□□□□ -0.15
TTC39A-201ENST00000262675 E9PCH4 1651 aa14.12□□□□□ -0.15
TTC39A-201ENST00000262675 JCADQ9P266 1359 aa14.12□□□□□ -0.15
TTC39A-201ENST00000262675 RGS17Q9UGC6 210 aaPredicted RBP14.12□□□□□ -0.15
TTC39A-201ENST00000262675 CLSPNQ9HAW4 1339 aa14.11□□□□□ -0.15
TTC39A-201ENST00000262675 TRPM2O94759 1503 aa14.1□□□□□ -0.15
TTC39A-201ENST00000262675 CADPS2Q86UW7 1296 aa14.09□□□□□ -0.15
TTC39A-201ENST00000262675 SPATA31A6Q5VVP1 1343 aa14.07□□□□□ -0.16
TTC39A-201ENST00000262675 CHGAP10645 457 aaKnown RBP14.07□□□□□ -0.16
TTC39A-201ENST00000262675 DIEXFQ68CQ4 756 aaKnown RBP14.07□□□□□ -0.16
TTC39A-201ENST00000262675 C19orf44Q9H6X5 657 aa14.07□□□□□ -0.16
TTC39A-201ENST00000262675 ADAMTS13Q76LX8 1427 aa14.07□□□□□ -0.16
TTC39A-201ENST00000262675 COL16A1Q07092 1604 aaPredicted RBP14.07□□□□□ -0.16
TTC39A-201ENST00000262675 AHDC1Q5TGY3 1603 aaPredicted RBP14.07□□□□□ -0.16
TTC39A-201ENST00000262675 C14orf37Q86TY3 774 aa14.06□□□□□ -0.16
TTC39A-201ENST00000262675 DCCP43146 1447 aa14.06□□□□□ -0.16
TTC39A-201ENST00000262675 ATF3P18847 181 aa14.06□□□□□ -0.16
TTC39A-201ENST00000262675 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.06□□□□□ -0.16
TTC39A-201ENST00000262675 NUP155O75694 1391 aa14.05□□□□□ -0.16
TTC39A-201ENST00000262675 ZNF316A6NFI3 1004 aaPredicted RBP14.05□□□□□ -0.16
TTC39A-201ENST00000262675 RBM33Q96EV2 1170 aaKnown RBP14.05□□□□□ -0.16
TTC39A-201ENST00000262675 SHPRHQ149N8 1683 aa14.04□□□□□ -0.16
TTC39A-201ENST00000262675 POTEAQ6S8J7 498 aa14.04□□□□□ -0.16
TTC39A-201ENST00000262675 RRBP1Q9P2E9 1410 aaKnown RBP14.04□□□□□ -0.16
TTC39A-201ENST00000262675 SPHKAPQ2M3C7 1700 aa14.03□□□□□ -0.16
TTC39A-201ENST00000262675 SETBP1Q9Y6X0 1596 aa14.03□□□□□ -0.16
TTC39A-201ENST00000262675 ZNF772Q68DY9 489 aaPredicted RBP14.02□□□□□ -0.16
TTC39A-201ENST00000262675 XRN1Q8IZH2 1706 aaKnown RBP14.01□□□□□ -0.17
TTC39A-201ENST00000262675 AMOTL2Q9Y2J4 779 aa14□□□□□ -0.17
TTC39A-201ENST00000262675 MEX3CQ5U5Q3 659 aaKnown RBP13.99□□□□□ -0.17
TTC39A-201ENST00000262675 NRXN3Q9Y4C0 1643 aa13.98□□□□□ -0.17
TTC39A-201ENST00000262675 CENPBP07199 599 aaPredicted RBP13.97□□□□□ -0.17
TTC39A-201ENST00000262675 PTPRUQ92729 1446 aa13.97□□□□□ -0.17
TTC39A-201ENST00000262675 SETD1AO15047 1707 aaKnown RBP13.96□□□□□ -0.17
TTC39A-201ENST00000262675 ZNF326Q5BKZ1 582 aaKnown RBP13.96□□□□□ -0.18
TTC39A-201ENST00000262675 NUTM2DQ5VT03 806 aaPredicted RBP13.96□□□□□ -0.18
TTC39A-201ENST00000262675 KIF1BO60333 1816 aa13.96□□□□□ -0.18
TTC39A-201ENST00000262675 NHSL1Q5SYE7 1610 aa13.95□□□□□ -0.18
TTC39A-201ENST00000262675 ASXL1Q8IXJ9 1541 aa13.95□□□□□ -0.18
TTC39A-201ENST00000262675 BRINP3Q76B58 766 aa13.95□□□□□ -0.18
TTC39A-201ENST00000262675 SETD5Q9C0A6 1442 aa13.95□□□□□ -0.18
TTC39A-201ENST00000262675 LRP6O75581 1613 aa13.95□□□□□ -0.18
TTC39A-201ENST00000262675 CDK12Q9NYV4 1490 aaPredicted RBP13.95□□□□□ -0.18
TTC39A-201ENST00000262675 ADGRL3Q9HAR2 1447 aa13.94□□□□□ -0.18
TTC39A-201ENST00000262675 MST1RQ04912 1400 aa13.93□□□□□ -0.18
TTC39A-201ENST00000262675 NEXMIFQ5QGS0 1516 aa13.93□□□□□ -0.18
TTC39A-201ENST00000262675 ITGAEP38570 1179 aa13.93□□□□□ -0.18
TTC39A-201ENST00000262675 LRRC59Q96AG4 307 aaKnown RBP13.93□□□□□ -0.18
TTC39A-201ENST00000262675 ACIN1Q9UKV3 1341 aaKnown RBP13.92□□□□□ -0.18
TTC39A-201ENST00000262675 CLTCL1P53675 1640 aa13.92□□□□□ -0.18
TTC39A-201ENST00000262675 RXRBP28702 533 aa13.9□□□□□ -0.18
TTC39A-201ENST00000262675 RPGRIP1LQ68CZ1 1315 aa13.9□□□□□ -0.18
TTC39A-201ENST00000262675 DHX57Q6P158 1386 aaKnown RBP13.9□□□□□ -0.18
TTC39A-201ENST00000262675 PTCH1Q13635 1447 aa13.9□□□□□ -0.18
TTC39A-201ENST00000262675 PRAG1Q86YV5 1406 aa13.9□□□□□ -0.18
TTC39A-201ENST00000262675 METP08581 1390 aa13.9□□□□□ -0.18
TTC39A-201ENST00000262675 VGFO15240 615 aaPredicted RBP13.9□□□□□ -0.18
TTC39A-201ENST00000262675 LAMC1P11047 1609 aa13.89□□□□□ -0.19
TTC39A-201ENST00000262675 NALCNQ8IZF0 1738 aa13.89□□□□□ -0.19
TTC39A-201ENST00000262675 PELP1Q8IZL8 1130 aaKnown RBP13.88□□□□□ -0.19
TTC39A-201ENST00000262675 NAIPQ13075 1403 aa13.87□□□□□ -0.19
TTC39A-201ENST00000262675 NUTM2BA6NNL0 878 aaPredicted RBP13.86□□□□□ -0.19
TTC39A-201ENST00000262675 NUTM2EB1AL46 878 aaPredicted RBP13.86□□□□□ -0.19
TTC39A-201ENST00000262675 NUTM2AQ8IVF1 878 aaPredicted RBP13.86□□□□□ -0.19
TTC39A-201ENST00000262675 AFF2P51816 1311 aa13.85□□□□□ -0.19
TTC39A-201ENST00000262675 HFM1A2PYH4 1435 aa13.85□□□□□ -0.19
TTC39A-201ENST00000262675 UPF1Q92900 1129 aaKnown RBP eCLIP13.85□□□□□ -0.19
TTC39A-201ENST00000262675 PNPLA6Q8IY17 1366 aa13.85□□□□□ -0.19
TTC39A-201ENST00000262675 C1orf167Q5SNV9 1468 aa13.85□□□□□ -0.19
TTC39A-201ENST00000262675 TRIM52Q96A61 297 aa13.85□□□□□ -0.19
TTC39A-201ENST00000262675 PPLO60437 1756 aa13.83□□□□□ -0.2
TTC39A-201ENST00000262675 RBM6P78332 1123 aaKnown RBP13.83□□□□□ -0.2
TTC39A-201ENST00000262675 NGLY1Q96IV0 654 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms