RNA–Protein interactions for RNA: ENST00000262519.13

SETD1A-201, Transcript of SET domain containing 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SETD1A, Length 6,451 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SETD1A-201ENST00000262519 VSIG10Q8N0Z9 540 aa17.01■□□□□ 0.31
SETD1A-201ENST00000262519 NEXNQ0ZGT2 675 aa17.01■□□□□ 0.31
SETD1A-201ENST00000262519 ANKRD20A12PQ8NF67 263 aa17■□□□□ 0.31
SETD1A-201ENST00000262519 BAZ1BQ9UIG0 1483 aaKnown RBP17■□□□□ 0.31
SETD1A-201ENST00000262519 ERICH2A1L162 156 aa17■□□□□ 0.31
SETD1A-201ENST00000262519 AIMP1Q12904 312 aaKnown RBP17■□□□□ 0.31
SETD1A-201ENST00000262519 CPLX2Q6PUV4 134 aaKnown RBP16.99■□□□□ 0.31
SETD1A-201ENST00000262519 RUFY1Q96T51 708 aa16.99■□□□□ 0.31
SETD1A-201ENST00000262519 EPS15P42566 896 aa16.98■□□□□ 0.31
SETD1A-201ENST00000262519 TRDNQ13061 729 aa16.98■□□□□ 0.31
SETD1A-201ENST00000262519 PDILTQ8N807 584 aa16.98■□□□□ 0.31
SETD1A-201ENST00000262519 NEUROD6Q96NK8 337 aa16.98■□□□□ 0.31
SETD1A-201ENST00000262519 MYO15BQ96JP2 1530 aa16.98■□□□□ 0.31
SETD1A-201ENST00000262519 DDX11L8A8MPP1 907 aa16.98■□□□□ 0.31
SETD1A-201ENST00000262519 EIF3AQ14152 1382 aaKnown RBP16.97■□□□□ 0.31
SETD1A-201ENST00000262519 STK11IPQ8N1F8 1099 aa16.97■□□□□ 0.31
SETD1A-201ENST00000262519 COG3Q96JB2 828 aa16.97■□□□□ 0.31
SETD1A-201ENST00000262519 FAM13BQ9NYF5 915 aa16.97■□□□□ 0.31
SETD1A-201ENST00000262519 CCER2I3L3R5 266 aa16.97■□□□□ 0.31
SETD1A-201ENST00000262519 NUTM2GQ5VZR2 741 aa16.97■□□□□ 0.31
SETD1A-201ENST00000262519 PLCD4Q9BRC7 762 aa16.97■□□□□ 0.31
SETD1A-201ENST00000262519 MPHOSPH9Q99550 1183 aa16.96■□□□□ 0.31
SETD1A-201ENST00000262519 COG6Q9Y2V7 657 aa16.96■□□□□ 0.31
SETD1A-201ENST00000262519 TIMELESSQ9UNS1 1208 aa16.96■□□□□ 0.31
SETD1A-201ENST00000262519 MINK1Q8N4C8 1332 aaPredicted RBP16.96■□□□□ 0.31
SETD1A-201ENST00000262519 EEA1Q15075 1411 aa16.96■□□□□ 0.3
SETD1A-201ENST00000262519 WRNQ14191 1432 aaPredicted RBP eCLIP16.95■□□□□ 0.31e-7■■■■■ 52.2
SETD1A-201ENST00000262519 WASHC4Q2M389 1173 aa16.95■□□□□ 0.3
SETD1A-201ENST00000262519 CCAR1Q8IX12 1150 aaKnown RBP16.95■□□□□ 0.3
SETD1A-201ENST00000262519 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.95■□□□□ 0.3
SETD1A-201ENST00000262519 ATP2B1P20020 1258 aa16.94■□□□□ 0.3
SETD1A-201ENST00000262519 ATP6V1DQ9Y5K8 247 aa16.94■□□□□ 0.3
SETD1A-201ENST00000262519 ZKSCAN1P17029 563 aaPredicted RBP16.93■□□□□ 0.3
SETD1A-201ENST00000262519 OFD1O75665 1012 aa16.93■□□□□ 0.3
SETD1A-201ENST00000262519 CAGE1Q8TC20 777 aa16.92■□□□□ 0.3
SETD1A-201ENST00000262519 MAP7D2Q96T17 732 aa16.92■□□□□ 0.3
SETD1A-201ENST00000262519 PSME1Q06323 249 aa16.92■□□□□ 0.3
SETD1A-201ENST00000262519 G3BP1Q13283 466 aaKnown RBP eCLIP16.92■□□□□ 0.3
SETD1A-201ENST00000262519 DCAF8L1A6NGE4 600 aa16.91■□□□□ 0.3
SETD1A-201ENST00000262519 IFT57Q9NWB7 429 aa16.91■□□□□ 0.3
SETD1A-201ENST00000262519 CRBNQ96SW2 442 aa16.91■□□□□ 0.3
SETD1A-201ENST00000262519 FKBP5Q13451 457 aaPredicted RBP16.9■□□□□ 0.3
SETD1A-201ENST00000262519 AK7Q96M32 723 aa16.9■□□□□ 0.3
SETD1A-201ENST00000262519 LRRFIP1Q32MZ4 808 aaKnown RBP16.9■□□□□ 0.3
SETD1A-201ENST00000262519 SASS6Q6UVJ0 657 aa16.9■□□□□ 0.3
SETD1A-201ENST00000262519 RUFY2Q8WXA3 655 aa16.9■□□□□ 0.3
SETD1A-201ENST00000262519 PANK3Q9H999 370 aa16.9■□□□□ 0.3
SETD1A-201ENST00000262519 HOOK1Q9UJC3 728 aaKnown RBP16.9■□□□□ 0.3
SETD1A-201ENST00000262519 ATP2B2Q01814 1243 aa16.89■□□□□ 0.29
SETD1A-201ENST00000262519 SETD5Q9C0A6 1442 aa16.89■□□□□ 0.29
SETD1A-201ENST00000262519 BRPF1P55201 1214 aaPredicted RBP16.89■□□□□ 0.29
SETD1A-201ENST00000262519 TEX35Q5T0J7 233 aa16.89■□□□□ 0.29
SETD1A-201ENST00000262519 CHMP4CQ96CF2 233 aa16.89■□□□□ 0.29
SETD1A-201ENST00000262519 EXOC6Q8TAG9 804 aa16.89■□□□□ 0.29
SETD1A-201ENST00000262519 EFCAB2Q5VUJ9 269 aa16.88■□□□□ 0.29
SETD1A-201ENST00000262519 ANKRD62A6NC57 917 aa16.88■□□□□ 0.29
SETD1A-201ENST00000262519 MNS1Q8NEH6 495 aa16.88■□□□□ 0.29
SETD1A-201ENST00000262519 CCDC180Q9P1Z9 1646 aa16.88■□□□□ 0.29
SETD1A-201ENST00000262519 ZKSCAN2Q63HK3 967 aa16.88■□□□□ 0.29
SETD1A-201ENST00000262519 FAM161AQ3B820 660 aa16.87■□□□□ 0.29
SETD1A-201ENST00000262519 SMC3Q9UQE7 1217 aa16.87■□□□□ 0.29
SETD1A-201ENST00000262519 SAFBQ15424 915 aaKnown RBP eCLIP16.87■□□□□ 0.29
SETD1A-201ENST00000262519 RIC3Q7Z5B4 369 aa16.87■□□□□ 0.29
SETD1A-201ENST00000262519 TSHZ2Q9NRE2 1034 aa16.86■□□□□ 0.29
SETD1A-201ENST00000262519 ARHGAP35Q9NRY4 1499 aa16.86■□□□□ 0.29
SETD1A-201ENST00000262519 WWC2Q6AWC2 1192 aa16.86■□□□□ 0.29
SETD1A-201ENST00000262519 CEP164Q9UPV0 1460 aa16.85■□□□□ 0.29
SETD1A-201ENST00000262519 HMOX1P09601 288 aa16.85■□□□□ 0.29
SETD1A-201ENST00000262519 KANK4Q5T7N3 995 aaPredicted RBP16.85■□□□□ 0.29
SETD1A-201ENST00000262519 RALYLQ86SE5 291 aaKnown RBP16.85■□□□□ 0.29
SETD1A-201ENST00000262519 NEFHP12036 1026 aa16.84■□□□□ 0.29
SETD1A-201ENST00000262519 PDE4AP27815 886 aa16.83■□□□□ 0.29
SETD1A-201ENST00000262519 DDX58O95786 925 aaKnown RBP16.83■□□□□ 0.28
SETD1A-201ENST00000262519 CDR1P51861 262 aa16.83■□□□□ 0.28
SETD1A-201ENST00000262519 PPM1FP49593 454 aaPredicted RBP16.83■□□□□ 0.28
SETD1A-201ENST00000262519 CCDC97Q96F63 343 aaPredicted RBP16.83■□□□□ 0.28
SETD1A-201ENST00000262519 FMNL2Q96PY5 1086 aa16.83■□□□□ 0.28
SETD1A-201ENST00000262519 RNF20Q5VTR2 975 aa16.82■□□□□ 0.28
SETD1A-201ENST00000262519 CCDC73Q6ZRK6 1079 aa16.82■□□□□ 0.28
SETD1A-201ENST00000262519 L3MBTL2Q969R5 705 aa16.82■□□□□ 0.28
SETD1A-201ENST00000262519 DNAJC2Q99543 621 aaKnown RBP16.82■□□□□ 0.28
SETD1A-201ENST00000262519 CEBPZQ03701 1054 aaKnown RBP16.82■□□□□ 0.28
SETD1A-201ENST00000262519 RIPK4P57078 832 aa16.82■□□□□ 0.28
SETD1A-201ENST00000262519 CARMIL1Q5VZK9 1371 aa16.82■□□□□ 0.28
SETD1A-201ENST00000262519 OLFM4Q6UX06 510 aa16.81■□□□□ 0.28
SETD1A-201ENST00000262519 ZHX3Q9H4I2 956 aa16.81■□□□□ 0.28
SETD1A-201ENST00000262519 CUX2O14529 1486 aa16.81■□□□□ 0.28
SETD1A-201ENST00000262519 NLRP13Q86W25 1043 aa16.81■□□□□ 0.28
SETD1A-201ENST00000262519 NLRP2Q9NX02 1062 aa16.81■□□□□ 0.28
SETD1A-201ENST00000262519 TSPYL4Q9UJ04 414 aa16.81■□□□□ 0.28
SETD1A-201ENST00000262519 KRT18P05783 430 aaKnown RBP16.81■□□□□ 0.28
SETD1A-201ENST00000262519 RNF214Q8ND24 703 aa16.81■□□□□ 0.28
SETD1A-201ENST00000262519 H0YHG0 523 aa16.8■□□□□ 0.28
SETD1A-201ENST00000262519 TNIKQ9UKE5 1360 aa16.8■□□□□ 0.28
SETD1A-201ENST00000262519 CCDC173Q0VFZ6 552 aa16.8■□□□□ 0.28
SETD1A-201ENST00000262519 SKOR2Q2VWA4 1001 aaPredicted RBP16.8■□□□□ 0.28
SETD1A-201ENST00000262519 GSE1Q14687 1217 aa16.8■□□□□ 0.28
SETD1A-201ENST00000262519 RBM42Q9BTD8 480 aaKnown RBP16.8■□□□□ 0.28
SETD1A-201ENST00000262519 BRMS1Q9HCU9 246 aa16.8■□□□□ 0.28
SETD1A-201ENST00000262519 CGNL1Q0VF96 1302 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms