RNA–Protein interactions for RNA: ENST00000262215.7

ARFGEF1-201, Transcript of ADP ribosylation factor guanine nucleotide exchange factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ARFGEF1, Length 7,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1-201ENST00000262215 CPLX2Q6PUV4 134 aaKnown RBP15.17■□□□□ 0.02
ARFGEF1-201ENST00000262215 HSP90AB3PQ58FF7 597 aa15.17■□□□□ 0.02
ARFGEF1-201ENST00000262215 EXOC6Q8TAG9 804 aa15.17■□□□□ 0.02
ARFGEF1-201ENST00000262215 SASS6Q6UVJ0 657 aa15.16■□□□□ 0.02
ARFGEF1-201ENST00000262215 C9orf78Q9NZ63 289 aaPredicted RBP15.16■□□□□ 0.02
ARFGEF1-201ENST00000262215 GOLGA3Q08378 1498 aa15.16■□□□□ 0.02
ARFGEF1-201ENST00000262215 CRBNQ96SW2 442 aa15.15■□□□□ 0.02
ARFGEF1-201ENST00000262215 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.15■□□□□ 0.02
ARFGEF1-201ENST00000262215 SKOR2Q2VWA4 1001 aaPredicted RBP15.15■□□□□ 0.02
ARFGEF1-201ENST00000262215 RNF214Q8ND24 703 aa15.15■□□□□ 0.02
ARFGEF1-201ENST00000262215 TRAK1Q9UPV9 953 aa15.15■□□□□ 0.02
ARFGEF1-201ENST00000262215 OFD1O75665 1012 aa15.14■□□□□ 0.01
ARFGEF1-201ENST00000262215 EPS15P42566 896 aa15.14■□□□□ 0.01
ARFGEF1-201ENST00000262215 FAM161AQ3B820 660 aa15.14■□□□□ 0.01
ARFGEF1-201ENST00000262215 HSP90B2PQ58FF3 399 aa15.14■□□□□ 0.01
ARFGEF1-201ENST00000262215 MAPK8IP2Q13387 824 aaPredicted RBP15.14■□□□□ 0.01
ARFGEF1-201ENST00000262215 TERF2IPQ9NYB0 399 aa15.14■□□□□ 0.01
ARFGEF1-201ENST00000262215 BRPF3Q9ULD4 1205 aa15.14■□□□□ 0.01
ARFGEF1-201ENST00000262215 IFIT2P09913 472 aaKnown RBP15.14■□□□□ 0.01
ARFGEF1-201ENST00000262215 C1orf141Q5JVX7 400 aa15.14■□□□□ 0.01
ARFGEF1-201ENST00000262215 CCDC191Q8NCU4 936 aa15.14■□□□□ 0.01
ARFGEF1-201ENST00000262215 CHMP4AQ9BY43 222 aa15.13■□□□□ 0.01
ARFGEF1-201ENST00000262215 ZKSCAN1P17029 563 aaPredicted RBP15.13■□□□□ 0.01
ARFGEF1-201ENST00000262215 NOM1Q5C9Z4 860 aaKnown RBP15.13■□□□□ 0.01
ARFGEF1-201ENST00000262215 CDR1P51861 262 aa15.13■□□□□ 0.01
ARFGEF1-201ENST00000262215 ANKRD62A6NC57 917 aa15.12■□□□□ 0.01
ARFGEF1-201ENST00000262215 TRDNQ13061 729 aa15.12■□□□□ 0.01
ARFGEF1-201ENST00000262215 FAM43AQ8N2R8 423 aa15.12■□□□□ 0.01
ARFGEF1-201ENST00000262215 BRPF1P55201 1214 aaPredicted RBP15.12■□□□□ 0.01
ARFGEF1-201ENST00000262215 ATP2B1P20020 1258 aa15.12■□□□□ 0.01
ARFGEF1-201ENST00000262215 STK11IPQ8N1F8 1099 aa15.12■□□□□ 0.01
ARFGEF1-201ENST00000262215 TSPYL1Q9H0U9 437 aa15.11■□□□□ 0.01
ARFGEF1-201ENST00000262215 CCDC27Q2M243 656 aa15.11■□□□□ 0.01
ARFGEF1-201ENST00000262215 EIF4G1Q04637 1599 aaKnown RBP15.11■□□□□ 0.01
ARFGEF1-201ENST00000262215 LMOD3Q0VAK6 560 aa15.11■□□□□ 0.01
ARFGEF1-201ENST00000262215 TMEM132AQ24JP5 1023 aa15.11■□□□□ 0.01
ARFGEF1-201ENST00000262215 HOOK1Q9UJC3 728 aaKnown RBP15.11■□□□□ 0.01
ARFGEF1-201ENST00000262215 ERICH2A1L162 156 aa15.11■□□□□ 0.01
ARFGEF1-201ENST00000262215 ARGLU1Q9NWB6 273 aaPredicted RBP15.1■□□□□ 0.01
ARFGEF1-201ENST00000262215 SMC3Q9UQE7 1217 aa15.1■□□□□ 0.01
ARFGEF1-201ENST00000262215 NEFHP12036 1026 aa15.1■□□□□ 0.01
ARFGEF1-201ENST00000262215 RBM10P98175 930 aaKnown RBP15.1■□□□□ 0.01
ARFGEF1-201ENST00000262215 FMNL2Q96PY5 1086 aa15.1■□□□□ 0.01
ARFGEF1-201ENST00000262215 MPNDQ8N594 471 aa15.1■□□□□ 0.01
ARFGEF1-201ENST00000262215 TEFQ10587 303 aa15.1■□□□□ 0.01
ARFGEF1-201ENST00000262215 PODXL2Q9NZ53 605 aa15.1■□□□□ 0.01
ARFGEF1-201ENST00000262215 RDXP35241 583 aaKnown RBP15.09■□□□□ 0.01
ARFGEF1-201ENST00000262215 IKQ13123 557 aaPredicted RBP15.09■□□□□ 0.01
ARFGEF1-201ENST00000262215 TTC5Q8N0Z6 440 aa15.09■□□□□ 0.01
ARFGEF1-201ENST00000262215 ZNF428Q96B54 188 aa15.09■□□□□ 0.01
ARFGEF1-201ENST00000262215 NEXNQ0ZGT2 675 aa15.08■□□□□ 0
ARFGEF1-201ENST00000262215 RUFY2Q8WXA3 655 aa15.08■□□□□ 0
ARFGEF1-201ENST00000262215 NEUROD6Q96NK8 337 aa15.08■□□□□ 0
ARFGEF1-201ENST00000262215 CENPQQ7L2Z9 268 aaPredicted RBP15.08■□□□□ 0
ARFGEF1-201ENST00000262215 TNIKQ9UKE5 1360 aa15.07■□□□□ 0
ARFGEF1-201ENST00000262215 AXDND1Q5T1B0 1012 aaPredicted RBP15.07■□□□□ 0
ARFGEF1-201ENST00000262215 ACBD3Q9H3P7 528 aa15.07■□□□□ 0
ARFGEF1-201ENST00000262215 CCDC73Q6ZRK6 1079 aa15.07■□□□□ 0
ARFGEF1-201ENST00000262215 WASHC4Q2M389 1173 aa15.07■□□□□ 0
ARFGEF1-201ENST00000262215 ZKSCAN2Q63HK3 967 aa15.07■□□□□ 0
ARFGEF1-201ENST00000262215 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.06■□□□□ 0
ARFGEF1-201ENST00000262215 KIF3BO15066 747 aa15.06■□□□□ 0
ARFGEF1-201ENST00000262215 CCDC173Q0VFZ6 552 aa15.06■□□□□ 0
ARFGEF1-201ENST00000262215 MPHOSPH9Q99550 1183 aa15.06■□□□□ 0
ARFGEF1-201ENST00000262215 FAM177BA6PVY3 158 aa15.06■□□□□ 0
ARFGEF1-201ENST00000262215 NUP155O75694 1391 aa15.06■□□□□ 0
ARFGEF1-201ENST00000262215 AIMP1Q12904 312 aaKnown RBP15.05■□□□□ 0
ARFGEF1-201ENST00000262215 SMC2O95347 1197 aa15.05■□□□□ -0
ARFGEF1-201ENST00000262215 CEBPZQ03701 1054 aaKnown RBP15.05■□□□□ -0
ARFGEF1-201ENST00000262215 DCTN1Q14203 1278 aa15.05■□□□□ -0
ARFGEF1-201ENST00000262215 EID1Q9Y6B2 187 aa15.05■□□□□ -0
ARFGEF1-201ENST00000262215 SAFBQ15424 915 aaKnown RBP eCLIP15.05■□□□□ -0
ARFGEF1-201ENST00000262215 REC8O95072 547 aa15.04■□□□□ -0
ARFGEF1-201ENST00000262215 OLFM4Q6UX06 510 aa15.04■□□□□ -0
ARFGEF1-201ENST00000262215 SDF4Q9BRK5 362 aa15.04■□□□□ -0
ARFGEF1-201ENST00000262215 CGNL1Q0VF96 1302 aa15.04■□□□□ -0
ARFGEF1-201ENST00000262215 G3BP1Q13283 466 aaKnown RBP eCLIP15.04■□□□□ -0
ARFGEF1-201ENST00000262215 PANK3Q9H999 370 aa15.04■□□□□ -0
ARFGEF1-201ENST00000262215 SPC24Q8NBT2 197 aa15.03■□□□□ -0
ARFGEF1-201ENST00000262215 LNPKQ9C0E8 428 aa15.03■□□□□ -0
ARFGEF1-201ENST00000262215 LRRFIP1Q32MZ4 808 aaKnown RBP15.03■□□□□ -0
ARFGEF1-201ENST00000262215 CHMP4CQ96CF2 233 aa15.03■□□□□ -0
ARFGEF1-201ENST00000262215 NLRP13Q86W25 1043 aa15.03■□□□□ -0
ARFGEF1-201ENST00000262215 FKBP5Q13451 457 aaPredicted RBP15.03■□□□□ -0
ARFGEF1-201ENST00000262215 IBSPP21815 317 aaPredicted RBP15.02■□□□□ -0
ARFGEF1-201ENST00000262215 CENPHQ9H3R5 247 aa15.02■□□□□ -0
ARFGEF1-201ENST00000262215 RBM33Q96EV2 1170 aaKnown RBP15.02□□□□□ -0.01
ARFGEF1-201ENST00000262215 RNF20Q5VTR2 975 aa15.02□□□□□ -0.01
ARFGEF1-201ENST00000262215 NFKBIBQ15653 356 aa15.01□□□□□ -0.01
ARFGEF1-201ENST00000262215 TRIM5Q9C035 493 aa15.01□□□□□ -0.01
ARFGEF1-201ENST00000262215 ENOX2Q16206 610 aaKnown RBP15.01□□□□□ -0.01
ARFGEF1-201ENST00000262215 RALYLQ86SE5 291 aaKnown RBP15.01□□□□□ -0.01
ARFGEF1-201ENST00000262215 FAM177A1Q8N128 213 aaPredicted RBP15.01□□□□□ -0.01
ARFGEF1-201ENST00000262215 CHMP5Q9NZZ3 219 aa15.01□□□□□ -0.01
ARFGEF1-201ENST00000262215 SETD5Q9C0A6 1442 aa15.01□□□□□ -0.01
ARFGEF1-201ENST00000262215 TAX1BP1Q86VP1 789 aa15□□□□□ -0.01
ARFGEF1-201ENST00000262215 APAF1O14727 1248 aa15□□□□□ -0.01
ARFGEF1-201ENST00000262215 COG3Q96JB2 828 aa15□□□□□ -0.01
ARFGEF1-201ENST00000262215 RRP1P56182 461 aaKnown RBP15□□□□□ -0.01
ARFGEF1-201ENST00000262215 MEX3CQ5U5Q3 659 aaKnown RBP15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms