RNA–Protein interactions for RNA: ENST00000262150.6

CDH19-201, Transcript of cadherin 19, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH19, Length 6,341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH19-201ENST00000262150 GGNBP2Q9H3C7 697 aa6.97□□□□□ -1.29
CDH19-201ENST00000262150 USP35Q9P2H5 1018 aa6.97□□□□□ -1.29
CDH19-201ENST00000262150 DUOX2Q9NRD8 1548 aa6.97□□□□□ -1.29
CDH19-201ENST00000262150 FAM135AQ9P2D6 1515 aa6.97□□□□□ -1.29
CDH19-201ENST00000262150 ZMYM3Q14202 1370 aa6.97□□□□□ -1.29
CDH19-201ENST00000262150 SAMD9Q5K651 1589 aa6.97□□□□□ -1.29
CDH19-201ENST00000262150 WAPLQ7Z5K2 1190 aa6.97□□□□□ -1.29
CDH19-201ENST00000262150 NEO1Q92859 1461 aa6.97□□□□□ -1.29
CDH19-201ENST00000262150 RTEL1-TNFRSF6BF6WH68 1400 aa6.97□□□□□ -1.29
CDH19-201ENST00000262150 FRAT1Q92837 279 aaPredicted RBP6.97□□□□□ -1.29
CDH19-201ENST00000262150 FKBP8Q14318 412 aa6.96□□□□□ -1.29
CDH19-201ENST00000262150 SYTL4Q96C24 671 aaPredicted RBP6.96□□□□□ -1.29
CDH19-201ENST00000262150 C1orf141Q5JVX7 400 aa6.96□□□□□ -1.3
CDH19-201ENST00000262150 CABP1Q9NZU7 370 aa6.96□□□□□ -1.3
CDH19-201ENST00000262150 STRN4Q9NRL3 753 aa6.96□□□□□ -1.3
CDH19-201ENST00000262150 GTF3C3Q9Y5Q9 886 aa6.96□□□□□ -1.3
CDH19-201ENST00000262150 NCKAP5LQ9HCH0 1330 aa6.96□□□□□ -1.3
CDH19-201ENST00000262150 CALD1Q05682 793 aaKnown RBP6.95□□□□□ -1.3
CDH19-201ENST00000262150 ADGRF5Q8IZF2 1346 aa6.95□□□□□ -1.3
CDH19-201ENST00000262150 UBAP1LF5GYI3 381 aa6.95□□□□□ -1.3
CDH19-201ENST00000262150 CCDC146Q8IYE0 955 aa6.95□□□□□ -1.3
CDH19-201ENST00000262150 ABCA8O94911 1581 aa6.95□□□□□ -1.3
CDH19-201ENST00000262150 IRX6P78412 446 aaPredicted RBP6.95□□□□□ -1.3
CDH19-201ENST00000262150 NBPF8Q3BBV2 869 aa6.95□□□□□ -1.3
CDH19-201ENST00000262150 NLRP13Q86W25 1043 aa6.95□□□□□ -1.3
CDH19-201ENST00000262150 RAPGEF4Q8WZA2 1011 aa6.94□□□□□ -1.3
CDH19-201ENST00000262150 CNTLNQ9NXG0 1405 aa6.94□□□□□ -1.3
CDH19-201ENST00000262150 NOS1P29475 1434 aa6.94□□□□□ -1.3
CDH19-201ENST00000262150 MSH5O43196 834 aa6.94□□□□□ -1.3
CDH19-201ENST00000262150 CCDC136Q96JN2 1154 aa6.93□□□□□ -1.3
CDH19-201ENST00000262150 SLC12A5Q9H2X9 1139 aa6.93□□□□□ -1.3
CDH19-201ENST00000262150 ZFYVE16Q7Z3T8 1539 aa6.93□□□□□ -1.3
CDH19-201ENST00000262150 UHRF1BP1Q6BDS2 1440 aa6.93□□□□□ -1.3
CDH19-201ENST00000262150 DIAPH1O60610 1272 aaKnown RBP6.93□□□□□ -1.3
CDH19-201ENST00000262150 TSPOAP1O95153 1857 aa6.93□□□□□ -1.3
CDH19-201ENST00000262150 NUDT16Q96DE0 195 aaKnown RBP6.93□□□□□ -1.3
CDH19-201ENST00000262150 ZNF692Q9BU19 519 aaPredicted RBP6.93□□□□□ -1.3
CDH19-201ENST00000262150 PRDM11Q9NQV5 511 aa6.93□□□□□ -1.3
CDH19-201ENST00000262150 PTPRKQ15262 1439 aa6.93□□□□□ -1.3
CDH19-201ENST00000262150 TOM1O60784 492 aa6.93□□□□□ -1.3
CDH19-201ENST00000262150 LMOD3Q0VAK6 560 aa6.93□□□□□ -1.3
CDH19-201ENST00000262150 ATP7AQ04656 1500 aa6.93□□□□□ -1.3
CDH19-201ENST00000262150 YEATS2Q9ULM3 1422 aa6.92□□□□□ -1.3
CDH19-201ENST00000262150 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP6.92□□□□□ -1.3
CDH19-201ENST00000262150 TEFQ10587 303 aa6.92□□□□□ -1.3
CDH19-201ENST00000262150 FOXO3O43524 673 aa6.92□□□□□ -1.3
CDH19-201ENST00000262150 RRP7AQ9Y3A4 280 aaKnown RBP6.92□□□□□ -1.3
CDH19-201ENST00000262150 KIF7Q2M1P5 1343 aa6.92□□□□□ -1.3
CDH19-201ENST00000262150 ZCCHC11Q5TAX3 1644 aaKnown RBP6.92□□□□□ -1.3
CDH19-201ENST00000262150 MYBBP1AQ9BQG0 1328 aaKnown RBP6.92□□□□□ -1.3
CDH19-201ENST00000262150 RIMS2Q9UQ26 1411 aa6.92□□□□□ -1.3
CDH19-201ENST00000262150 CCER2I3L3R5 266 aa6.91□□□□□ -1.3
CDH19-201ENST00000262150 OS9Q13438 667 aaPredicted RBP6.91□□□□□ -1.3
CDH19-201ENST00000262150 CADPS2Q86UW7 1296 aa6.91□□□□□ -1.3
CDH19-201ENST00000262150 CCDC61Q9Y6R9 512 aa6.91□□□□□ -1.3
CDH19-201ENST00000262150 MSH6P52701 1360 aa6.91□□□□□ -1.3
CDH19-201ENST00000262150 ADAMTS2O95450 1211 aa6.91□□□□□ -1.3
CDH19-201ENST00000262150 STK31Q9BXU1 1019 aa6.91□□□□□ -1.3
CDH19-201ENST00000262150 PHF8Q9UPP1 1060 aa6.91□□□□□ -1.3
CDH19-201ENST00000262150 CFAP43Q8NDM7 1665 aa6.91□□□□□ -1.3
CDH19-201ENST00000262150 TOM1L2Q6ZVM7 507 aa6.91□□□□□ -1.3
CDH19-201ENST00000262150 TTC5Q8N0Z6 440 aa6.91□□□□□ -1.3
CDH19-201ENST00000262150 ZC3H6P61129 1189 aaKnown RBP6.91□□□□□ -1.3
CDH19-201ENST00000262150 TCOF1Q13428 1488 aaKnown RBP6.91□□□□□ -1.3
CDH19-201ENST00000262150 CHMP4AQ9BY43 222 aa6.9□□□□□ -1.3
CDH19-201ENST00000262150 RIMBP3CA6NJZ7 1639 aa6.9□□□□□ -1.3
CDH19-201ENST00000262150 RIMBP3BA6NNM3 1639 aa6.9□□□□□ -1.3
CDH19-201ENST00000262150 RIMBP3Q9UFD9 1639 aa6.9□□□□□ -1.3
CDH19-201ENST00000262150 ATAD2Q6PL18 1390 aa6.9□□□□□ -1.3
CDH19-201ENST00000262150 SHANK2Q9UPX8 1470 aa6.9□□□□□ -1.31
CDH19-201ENST00000262150 CFAP74Q9C0B2 1584 aa6.9□□□□□ -1.31
CDH19-201ENST00000262150 HMOX1P09601 288 aa6.9□□□□□ -1.31
CDH19-201ENST00000262150 C14orf93Q9H972 538 aaKnown RBP6.9□□□□□ -1.31
CDH19-201ENST00000262150 CLASP1Q7Z460 1538 aa6.89□□□□□ -1.31
CDH19-201ENST00000262150 MS4A1P11836 297 aa6.89□□□□□ -1.31
CDH19-201ENST00000262150 GTF2E1P29083 439 aaPredicted RBP6.89□□□□□ -1.31
CDH19-201ENST00000262150 CCDC7Q96M83 1385 aa6.89□□□□□ -1.31
CDH19-201ENST00000262150 WASLO00401 505 aaPredicted RBP6.89□□□□□ -1.31
CDH19-201ENST00000262150 GOLGA2Q08379 1002 aa6.89□□□□□ -1.31
CDH19-201ENST00000262150 SF3B2Q13435 895 aaKnown RBP6.89□□□□□ -1.31
CDH19-201ENST00000262150 TMX4Q9H1E5 349 aaPredicted RBP6.89□□□□□ -1.31
CDH19-201ENST00000262150 NGLY1Q96IV0 654 aa6.88□□□□□ -1.31
CDH19-201ENST00000262150 CHMP4BQ9H444 224 aaKnown RBP6.88□□□□□ -1.31
CDH19-201ENST00000262150 MAPKBP1O60336 1514 aa6.88□□□□□ -1.31
CDH19-201ENST00000262150 LMTK3Q96Q04 1460 aa6.88□□□□□ -1.31
CDH19-201ENST00000262150 MAGI3Q5TCQ9 1506 aa6.88□□□□□ -1.31
CDH19-201ENST00000262150 KRT28Q7Z3Y7 464 aa6.88□□□□□ -1.31
CDH19-201ENST00000262150 PRKRIP1Q9H875 184 aaPredicted RBP6.87□□□□□ -1.31
CDH19-201ENST00000262150 SMG6Q86US8 1419 aaKnown RBP6.87□□□□□ -1.31
CDH19-201ENST00000262150 MTHFSP49914 203 aa6.87□□□□□ -1.31
CDH19-201ENST00000262150 LRPPRCP42704 1394 aaKnown RBP6.87□□□□□ -1.31
CDH19-201ENST00000262150 MYO5CQ9NQX4 1742 aa6.87□□□□□ -1.31
CDH19-201ENST00000262150 ELL2O00472 640 aaPredicted RBP6.87□□□□□ -1.31
CDH19-201ENST00000262150 UPF2Q9HAU5 1272 aaKnown RBP6.87□□□□□ -1.31
CDH19-201ENST00000262150 TATP17735 454 aaPredicted RBP6.87□□□□□ -1.31
CDH19-201ENST00000262150 NGEFQ8N5V2 710 aa6.87□□□□□ -1.31
CDH19-201ENST00000262150 KDM6BO15054 1643 aa6.87□□□□□ -1.31
CDH19-201ENST00000262150 IPO8O15397 1037 aaKnown RBP6.87□□□□□ -1.31
CDH19-201ENST00000262150 DDX54Q8TDD1 881 aaKnown RBP6.87□□□□□ -1.31
CDH19-201ENST00000262150 TTC37Q6PGP7 1564 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms