RNA–Protein interactions for RNA: ENST00000262018.7

SGCA-201, Transcript of sarcoglycan alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCA, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-201ENST00000262018 KDM5AP29375 1690 aaKnown RBP20.58■□□□□ 0.88
SGCA-201ENST00000262018 AFF2P51816 1311 aa20.55■□□□□ 0.88
SGCA-201ENST00000262018 KANK1Q14678 1352 aa20.55■□□□□ 0.88
SGCA-201ENST00000262018 KIF15Q9NS87 1388 aa20.55■□□□□ 0.88
SGCA-201ENST00000262018 SHPRHQ149N8 1683 aa20.55■□□□□ 0.88
SGCA-201ENST00000262018 VPS8Q8N3P4 1428 aa20.54■□□□□ 0.88
SGCA-201ENST00000262018 RRP7BPQ9NSQ0 103 aa20.53■□□□□ 0.88
SGCA-201ENST00000262018 AHDC1Q5TGY3 1603 aaPredicted RBP20.53■□□□□ 0.88
SGCA-201ENST00000262018 CADPS2Q86UW7 1296 aa20.52■□□□□ 0.87
SGCA-201ENST00000262018 ADGRB3O60242 1522 aa20.51■□□□□ 0.87
SGCA-201ENST00000262018 ERBINQ96RT1 1412 aa20.51■□□□□ 0.87
SGCA-201ENST00000262018 ATF3P18847 181 aa20.51■□□□□ 0.87
SGCA-201ENST00000262018 NUTM2DQ5VT03 806 aaPredicted RBP20.51■□□□□ 0.87
SGCA-201ENST00000262018 RGS12O14924 1447 aa20.5■□□□□ 0.87
SGCA-201ENST00000262018 CHD2O14647 1828 aaKnown RBP20.5■□□□□ 0.87
SGCA-201ENST00000262018 NCOA3Q9Y6Q9 1424 aa20.49■□□□□ 0.87
SGCA-201ENST00000262018 SRCAPQ6ZRS2 3230 aa20.49■□□□□ 0.87
SGCA-201ENST00000262018 PPP1R15AO75807 674 aaPredicted RBP20.49■□□□□ 0.87
SGCA-201ENST00000262018 MYOM3Q5VTT5 1437 aa20.49■□□□□ 0.87
SGCA-201ENST00000262018 C19orf44Q9H6X5 657 aa20.48■□□□□ 0.87
SGCA-201ENST00000262018 QTRT2Q9H974 415 aaKnown RBP20.48■□□□□ 0.87
SGCA-201ENST00000262018 PLEKHG1Q9ULL1 1385 aa20.48■□□□□ 0.87
SGCA-201ENST00000262018 RBM6P78332 1123 aaKnown RBP20.47■□□□□ 0.87
SGCA-201ENST00000262018 BRINP3Q76B58 766 aa20.46■□□□□ 0.87
SGCA-201ENST00000262018 SLC52A1Q9NWF4 448 aa20.46■□□□□ 0.87
SGCA-201ENST00000262018 NOS1P29475 1434 aa20.46■□□□□ 0.87
SGCA-201ENST00000262018 DIP2AQ14689 1571 aa20.45■□□□□ 0.86
SGCA-201ENST00000262018 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.45■□□□□ 0.86
SGCA-201ENST00000262018 C8orf37Q96NL8 207 aa20.44■□□□□ 0.86
SGCA-201ENST00000262018 TBX22Q9Y458 520 aa20.44■□□□□ 0.86
SGCA-201ENST00000262018 LMTK2Q8IWU2 1503 aa20.44■□□□□ 0.86
SGCA-201ENST00000262018 ZFYVE9O95405 1425 aa20.44■□□□□ 0.86
SGCA-201ENST00000262018 HDGFP51858 240 aaKnown RBP20.44■□□□□ 0.86
SGCA-201ENST00000262018 ZRANB1Q9UGI0 708 aa20.44■□□□□ 0.86
SGCA-201ENST00000262018 RIMS2Q9UQ26 1411 aa20.43■□□□□ 0.86
SGCA-201ENST00000262018 FOXD1Q16676 465 aa20.42■□□□□ 0.86
SGCA-201ENST00000262018 ABCC5O15440 1437 aa20.41■□□□□ 0.86
SGCA-201ENST00000262018 ATAD2Q6PL18 1390 aa20.39■□□□□ 0.86
SGCA-201ENST00000262018 SETD5Q9C0A6 1442 aa20.38■□□□□ 0.85
SGCA-201ENST00000262018 KANK4Q5T7N3 995 aaPredicted RBP20.37■□□□□ 0.85
SGCA-201ENST00000262018 LRRC59Q96AG4 307 aaKnown RBP20.37■□□□□ 0.85
SGCA-201ENST00000262018 NGLY1Q96IV0 654 aa20.37■□□□□ 0.85
SGCA-201ENST00000262018 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.36■□□□□ 0.85
SGCA-201ENST00000262018 ASXL1Q8IXJ9 1541 aa20.35■□□□□ 0.85
SGCA-201ENST00000262018 SETBP1Q9Y6X0 1596 aa20.35■□□□□ 0.85
SGCA-201ENST00000262018 MYO5BQ9ULV0 1848 aa20.35■□□□□ 0.85
SGCA-201ENST00000262018 CROCC2H7BZ55 1655 aa20.35■□□□□ 0.85
SGCA-201ENST00000262018 ADAMTS13Q76LX8 1427 aa20.35■□□□□ 0.85
SGCA-201ENST00000262018 CHGAP10645 457 aaKnown RBP20.35■□□□□ 0.85
SGCA-201ENST00000262018 CHIC2Q9UKJ5 165 aa20.35■□□□□ 0.85
SGCA-201ENST00000262018 PIK3R4Q99570 1358 aa20.34■□□□□ 0.85
SGCA-201ENST00000262018 ADAMTS2O95450 1211 aa20.33■□□□□ 0.84
SGCA-201ENST00000262018 TRIM26Q12899 539 aaPredicted RBP20.33■□□□□ 0.84
SGCA-201ENST00000262018 AMOTL2Q9Y2J4 779 aa20.33■□□□□ 0.84
SGCA-201ENST00000262018 GCC2Q8IWJ2 1684 aa20.32■□□□□ 0.84
SGCA-201ENST00000262018 DDX17Q92841 729 aaKnown RBP20.32■□□□□ 0.84
SGCA-201ENST00000262018 PNPLA6Q8IY17 1366 aa20.32■□□□□ 0.84
SGCA-201ENST00000262018 DAPK1P53355 1430 aa20.32■□□□□ 0.84
SGCA-201ENST00000262018 ANKRD30AQ9BXX3 1397 aa20.31■□□□□ 0.84
SGCA-201ENST00000262018 TMEM131LA2VDJ0 1609 aa20.3■□□□□ 0.84
SGCA-201ENST00000262018 DCCP43146 1447 aa20.29■□□□□ 0.84
SGCA-201ENST00000262018 APLP2Q06481 763 aa20.29■□□□□ 0.84
SGCA-201ENST00000262018 NHSL1Q5SYE7 1610 aa20.29■□□□□ 0.84
SGCA-201ENST00000262018 RPRD2Q5VT52 1461 aaKnown RBP20.29■□□□□ 0.84
SGCA-201ENST00000262018 MST1RQ04912 1400 aa20.29■□□□□ 0.84
SGCA-201ENST00000262018 PTPRUQ92729 1446 aa20.28■□□□□ 0.84
SGCA-201ENST00000262018 USP21Q9UK80 565 aa20.27■□□□□ 0.84
SGCA-201ENST00000262018 PTPN23Q9H3S7 1636 aa20.27■□□□□ 0.84
SGCA-201ENST00000262018 PCGF6Q9BYE7 350 aa20.27■□□□□ 0.83
SGCA-201ENST00000262018 TRPM2O94759 1503 aa20.26■□□□□ 0.83
SGCA-201ENST00000262018 TRPC5Q9UL62 973 aaPredicted RBP20.26■□□□□ 0.83
SGCA-201ENST00000262018 CCDC125Q86Z20 511 aa20.23■□□□□ 0.83
SGCA-201ENST00000262018 PPARGC1BQ86YN6 1023 aaKnown RBP20.2■□□□□ 0.82
SGCA-201ENST00000262018 ATRNO75882 1429 aa20.18■□□□□ 0.82
SGCA-201ENST00000262018 FNBP4Q8N3X1 1017 aaPredicted RBP20.18■□□□□ 0.82
SGCA-201ENST00000262018 UNC13BO14795 1591 aa20.16■□□□□ 0.82
SGCA-201ENST00000262018 XRN1Q8IZH2 1706 aaKnown RBP20.16■□□□□ 0.82
SGCA-201ENST00000262018 PTCH1Q13635 1447 aa20.14■□□□□ 0.81
SGCA-201ENST00000262018 ADGRL3Q9HAR2 1447 aa20.14■□□□□ 0.81
SGCA-201ENST00000262018 ANKRD50Q9ULJ7 1429 aa20.14■□□□□ 0.81
SGCA-201ENST00000262018 ADGRL2O95490 1459 aa20.12■□□□□ 0.81
SGCA-201ENST00000262018 C1orf167Q5SNV9 1468 aa20.12■□□□□ 0.81
SGCA-201ENST00000262018 SOS2Q07890 1332 aaPredicted RBP20.11■□□□□ 0.81
SGCA-201ENST00000262018 METP08581 1390 aa20.1■□□□□ 0.81
SGCA-201ENST00000262018 EP400Q96L91 3159 aa20.1■□□□□ 0.81
SGCA-201ENST00000262018 ORAI2Q96SN7 254 aa20.1■□□□□ 0.81
SGCA-201ENST00000262018 DEFB132Q7Z7B7 95 aa20.09■□□□□ 0.81
SGCA-201ENST00000262018 BLMP54132 1417 aaPredicted RBP20.09■□□□□ 0.81
SGCA-201ENST00000262018 NRXN3Q9Y4C0 1643 aa20.08■□□□□ 0.81
SGCA-201ENST00000262018 GJD4Q96KN9 370 aaPredicted RBP20.08■□□□□ 0.8
SGCA-201ENST00000262018 NALCNQ8IZF0 1738 aa20.07■□□□□ 0.8
SGCA-201ENST00000262018 E9PCH4 1651 aa20.07■□□□□ 0.8
SGCA-201ENST00000262018 BCL9LQ86UU0 1499 aa20.07■□□□□ 0.8
SGCA-201ENST00000262018 LAMC1P11047 1609 aa20.05■□□□□ 0.8
SGCA-201ENST00000262018 LRP5O75197 1615 aa20.04■□□□□ 0.8
SGCA-201ENST00000262018 SF3B2Q13435 895 aaKnown RBP20.04■□□□□ 0.8
SGCA-201ENST00000262018 ZNF326Q5BKZ1 582 aaKnown RBP20.04■□□□□ 0.8
SGCA-201ENST00000262018 FAM50AQ14320 339 aaKnown RBP20.03■□□□□ 0.8
SGCA-201ENST00000262018 MYOM2P54296 1465 aa20.02■□□□□ 0.79
SGCA-201ENST00000262018 COL22A1Q8NFW1 1626 aaPredicted RBP20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms