RNA–Protein interactions for RNA: ENST00000261318.4

C12orf49-201, Transcript of chromosome 12 open reading frame 49, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C12orf49, Length 8,404 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf49-201ENST00000261318 NUTM2DQ5VT03 806 aaPredicted RBP18.2■□□□□ 0.5
C12orf49-201ENST00000261318 EVC2Q86UK5 1308 aa18.18■□□□□ 0.5
C12orf49-201ENST00000261318 WASHC2CQ9Y4E1 1318 aa18.18■□□□□ 0.5
C12orf49-201ENST00000261318 C22orf23Q9BZE7 217 aa18.18■□□□□ 0.5
C12orf49-201ENST00000261318 HOMER1Q86YM7 354 aa18.18■□□□□ 0.5
C12orf49-201ENST00000261318 AKAP17AQ02040 695 aaKnown RBP18.18■□□□□ 0.5
C12orf49-201ENST00000261318 CNTLNQ9NXG0 1405 aa18.17■□□□□ 0.5
C12orf49-201ENST00000261318 LRRFIP1Q32MZ4 808 aaKnown RBP18.17■□□□□ 0.5
C12orf49-201ENST00000261318 INTS3Q68E01 1043 aaKnown RBP18.17■□□□□ 0.5
C12orf49-201ENST00000261318 PRDM2Q13029 1718 aa18.17■□□□□ 0.5
C12orf49-201ENST00000261318 TMX4Q9H1E5 349 aaPredicted RBP18.17■□□□□ 0.5
C12orf49-201ENST00000261318 LTV1Q96GA3 475 aaPredicted RBP18.17■□□□□ 0.5
C12orf49-201ENST00000261318 MARCH6O60337 910 aa18.16■□□□□ 0.5
C12orf49-201ENST00000261318 MRE11P49959 708 aa18.16■□□□□ 0.5
C12orf49-201ENST00000261318 NASPP49321 788 aaPredicted RBP18.16■□□□□ 0.5
C12orf49-201ENST00000261318 BICD2Q8TD16 824 aa18.16■□□□□ 0.5
C12orf49-201ENST00000261318 ANO2Q9NQ90 1003 aa18.16■□□□□ 0.5
C12orf49-201ENST00000261318 AAMPQ13685 434 aa18.15■□□□□ 0.5
C12orf49-201ENST00000261318 CCDC7Q96M83 1385 aa18.15■□□□□ 0.5
C12orf49-201ENST00000261318 CPLX2Q6PUV4 134 aaKnown RBP18.15■□□□□ 0.5
C12orf49-201ENST00000261318 MTERF4Q7Z6M4 381 aaKnown RBP18.15■□□□□ 0.5
C12orf49-201ENST00000261318 HOOK1Q9UJC3 728 aaKnown RBP18.15■□□□□ 0.5
C12orf49-201ENST00000261318 IPO7O95373 1038 aaKnown RBP18.14■□□□□ 0.5
C12orf49-201ENST00000261318 SASS6Q6UVJ0 657 aa18.14■□□□□ 0.49
C12orf49-201ENST00000261318 COG3Q96JB2 828 aa18.14■□□□□ 0.49
C12orf49-201ENST00000261318 CCDC9Q9Y3X0 531 aaKnown RBP18.14■□□□□ 0.49
C12orf49-201ENST00000261318 CUX1P39880 1505 aa18.14■□□□□ 0.49
C12orf49-201ENST00000261318 FRAT2O75474 233 aaPredicted RBP18.14■□□□□ 0.49
C12orf49-201ENST00000261318 SYNE3Q6ZMZ3 975 aa18.14■□□□□ 0.49
C12orf49-201ENST00000261318 TRIM29Q14134 588 aa18.13■□□□□ 0.49
C12orf49-201ENST00000261318 RNF20Q5VTR2 975 aa18.13■□□□□ 0.49
C12orf49-201ENST00000261318 ANKRD20A12PQ8NF67 263 aa18.13■□□□□ 0.49
C12orf49-201ENST00000261318 RUSC2Q8N2Y8 1516 aa18.12■□□□□ 0.49
C12orf49-201ENST00000261318 API5Q9BZZ5 524 aaKnown RBP18.12■□□□□ 0.49
C12orf49-201ENST00000261318 MAP7D2Q96T17 732 aa18.12■□□□□ 0.49
C12orf49-201ENST00000261318 IFT57Q9NWB7 429 aa18.12■□□□□ 0.49
C12orf49-201ENST00000261318 CCDC39Q9UFE4 941 aa18.12■□□□□ 0.49
C12orf49-201ENST00000261318 SMC3Q9UQE7 1217 aa18.12■□□□□ 0.49
C12orf49-201ENST00000261318 EID1Q9Y6B2 187 aa18.12■□□□□ 0.49
C12orf49-201ENST00000261318 RUNDC1Q96C34 613 aa18.11■□□□□ 0.49
C12orf49-201ENST00000261318 C9orf78Q9NZ63 289 aaPredicted RBP18.11■□□□□ 0.49
C12orf49-201ENST00000261318 SMARCA4P51532 1647 aa18.11■□□□□ 0.49
C12orf49-201ENST00000261318 VPS53Q5VIR6 699 aa18.11■□□□□ 0.49
C12orf49-201ENST00000261318 ARGLU1Q9NWB6 273 aaPredicted RBP18.11■□□□□ 0.49
C12orf49-201ENST00000261318 RIPK4P57078 832 aa18.1■□□□□ 0.49
C12orf49-201ENST00000261318 VPS37CA5D8V6 355 aaPredicted RBP18.1■□□□□ 0.49
C12orf49-201ENST00000261318 LNPKQ9C0E8 428 aa18.1■□□□□ 0.49
C12orf49-201ENST00000261318 IFIT2P09913 472 aaKnown RBP18.09■□□□□ 0.49
C12orf49-201ENST00000261318 NEXNQ0ZGT2 675 aa18.09■□□□□ 0.49
C12orf49-201ENST00000261318 C1orf141Q5JVX7 400 aa18.09■□□□□ 0.49
C12orf49-201ENST00000261318 KIF7Q2M1P5 1343 aa18.09■□□□□ 0.49
C12orf49-201ENST00000261318 CPLX1O14810 134 aa18.08■□□□□ 0.49
C12orf49-201ENST00000261318 R3HCC1Q9Y3T6 440 aaKnown RBP18.08■□□□□ 0.49
C12orf49-201ENST00000261318 PCMTD1Q96MG8 357 aaPredicted RBP18.08■□□□□ 0.49
C12orf49-201ENST00000261318 DIAPH1O60610 1272 aaKnown RBP18.08■□□□□ 0.48
C12orf49-201ENST00000261318 NUTM2FA1L443 756 aa18.07■□□□□ 0.48
C12orf49-201ENST00000261318 TRAK2O60296 914 aa18.07■□□□□ 0.48
C12orf49-201ENST00000261318 NOM1Q5C9Z4 860 aaKnown RBP18.07■□□□□ 0.48
C12orf49-201ENST00000261318 BRD4O60885 1362 aaPredicted RBP18.07■□□□□ 0.48
C12orf49-201ENST00000261318 PRM3Q9NNZ6 103 aa18.06■□□□□ 0.48
C12orf49-201ENST00000261318 G3V3G9 751 aa18.06■□□□□ 0.48
C12orf49-201ENST00000261318 TEFQ10587 303 aa18.06■□□□□ 0.48
C12orf49-201ENST00000261318 DCAF8Q5TAQ9 597 aa18.06■□□□□ 0.48
C12orf49-201ENST00000261318 MNS1Q8NEH6 495 aa18.06■□□□□ 0.48
C12orf49-201ENST00000261318 VGFO15240 615 aaPredicted RBP18.05■□□□□ 0.48
C12orf49-201ENST00000261318 PANK1Q8TE04 598 aa18.05■□□□□ 0.48
C12orf49-201ENST00000261318 ACBD3Q9H3P7 528 aa18.05■□□□□ 0.48
C12orf49-201ENST00000261318 CCDC73Q6ZRK6 1079 aa18.04■□□□□ 0.48
C12orf49-201ENST00000261318 CCDC47Q96A33 483 aaKnown RBP18.04■□□□□ 0.48
C12orf49-201ENST00000261318 NAT10Q9H0A0 1025 aaKnown RBP18.04■□□□□ 0.48
C12orf49-201ENST00000261318 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.04■□□□□ 0.48
C12orf49-201ENST00000261318 RUFY1Q96T51 708 aa18.03■□□□□ 0.48
C12orf49-201ENST00000261318 CDC45O75419 566 aa18.03■□□□□ 0.48
C12orf49-201ENST00000261318 GTF2E1P29083 439 aaPredicted RBP18.03■□□□□ 0.48
C12orf49-201ENST00000261318 AK7Q96M32 723 aa18.03■□□□□ 0.48
C12orf49-201ENST00000261318 PATL2C9JE40 543 aaKnown RBP18.03■□□□□ 0.48
C12orf49-201ENST00000261318 TRDNQ13061 729 aa18.03■□□□□ 0.48
C12orf49-201ENST00000261318 EIF2S2P20042 333 aaKnown RBP18.03■□□□□ 0.48
C12orf49-201ENST00000261318 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.02■□□□□ 0.48
C12orf49-201ENST00000261318 FBXW7Q969H0 707 aa18.02■□□□□ 0.48
C12orf49-201ENST00000261318 MIA2Q96PC5 1412 aa18.02■□□□□ 0.48
C12orf49-201ENST00000261318 LETM1O95202 739 aaPredicted RBP18.02■□□□□ 0.48
C12orf49-201ENST00000261318 ERC2O15083 957 aa18.02■□□□□ 0.47
C12orf49-201ENST00000261318 HSP90B2PQ58FF3 399 aa18.02■□□□□ 0.47
C12orf49-201ENST00000261318 APPP05067 770 aa18.01■□□□□ 0.47
C12orf49-201ENST00000261318 FKBP5Q13451 457 aaPredicted RBP18.01■□□□□ 0.47
C12orf49-201ENST00000261318 FGD6Q6ZV73 1430 aa18.01■□□□□ 0.47
C12orf49-201ENST00000261318 CAVIN1Q6NZI2 390 aaKnown RBP18.01■□□□□ 0.47
C12orf49-201ENST00000261318 BRPF3Q9ULD4 1205 aa18.01■□□□□ 0.47
C12orf49-201ENST00000261318 MYOM3Q5VTT5 1437 aa18.01■□□□□ 0.47
C12orf49-201ENST00000261318 G3BP1Q13283 466 aaKnown RBP eCLIP18■□□□□ 0.47
C12orf49-201ENST00000261318 TRHP20396 242 aaPredicted RBP18■□□□□ 0.47
C12orf49-201ENST00000261318 NECTIN2Q92692 538 aa18■□□□□ 0.47
C12orf49-201ENST00000261318 GNAI1P63096 354 aa18■□□□□ 0.47
C12orf49-201ENST00000261318 MBD3O95983 291 aa18■□□□□ 0.47
C12orf49-201ENST00000261318 CCDC173Q0VFZ6 552 aa18■□□□□ 0.47
C12orf49-201ENST00000261318 MINK1Q8N4C8 1332 aaPredicted RBP17.99■□□□□ 0.47
C12orf49-201ENST00000261318 WASHC2AQ641Q2 1341 aa17.99■□□□□ 0.47
C12orf49-201ENST00000261318 RNF214Q8ND24 703 aa17.99■□□□□ 0.47
C12orf49-201ENST00000261318 NINLQ9Y2I6 1382 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms