RNA–Protein interactions for RNA: ENST00000260653.4

SIX3-201, Transcript of SIX homeobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX3, Length 2,523 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3-201ENST00000260653 FBXO31Q5XUX0 539 aaPredicted RBP31.12■■■□□ 2.57
SIX3-201ENST00000260653 PPLO60437 1756 aa31.12■■■□□ 2.57
SIX3-201ENST00000260653 IDI1Q13907 227 aa31.1■■■□□ 2.57
SIX3-201ENST00000260653 KIAA1210Q9ULL0 1709 aa31.1■■■□□ 2.57
SIX3-201ENST00000260653 ERVK-7P63135 1459 aa31.1■■■□□ 2.57
SIX3-201ENST00000260653 NRXN1Q9ULB1 1477 aa31.1■■■□□ 2.57
SIX3-201ENST00000260653 POLR3GLQ9BT43 218 aa31.09■■■□□ 2.57
SIX3-201ENST00000260653 ARID4BQ4LE39 1312 aaPredicted RBP31.08■■■□□ 2.57
SIX3-201ENST00000260653 SLC52A1Q9NWF4 448 aa31.08■■■□□ 2.57
SIX3-201ENST00000260653 IQGAP1P46940 1657 aa31.07■■■□□ 2.56
SIX3-201ENST00000260653 CFAP70Q5T0N1 1121 aa31.04■■■□□ 2.56
SIX3-201ENST00000260653 RPGRIP1LQ68CZ1 1315 aa31.04■■■□□ 2.56
SIX3-201ENST00000260653 MYO5BQ9ULV0 1848 aa31.02■■■□□ 2.56
SIX3-201ENST00000260653 TESK2Q96S53 571 aa31.01■■■□□ 2.56
SIX3-201ENST00000260653 SCAF11Q99590 1463 aaKnown RBP31.01■■■□□ 2.56
SIX3-201ENST00000260653 NEXMIFQ5QGS0 1516 aa31.01■■■□□ 2.55
SIX3-201ENST00000260653 TMEM131LA2VDJ0 1609 aa31■■■□□ 2.55
SIX3-201ENST00000260653 PIK3C2GO75747 1445 aa31■■■□□ 2.55
SIX3-201ENST00000260653 SPATA31D1Q6ZQQ2 1576 aa30.99■■■□□ 2.55
SIX3-201ENST00000260653 ESF1Q9H501 851 aaKnown RBP30.98■■■□□ 2.55
SIX3-201ENST00000260653 NUTM2DQ5VT03 806 aaPredicted RBP30.96■■■□□ 2.55
SIX3-201ENST00000260653 DISP3Q9P2K9 1392 aa30.95■■■□□ 2.55
SIX3-201ENST00000260653 CCER2I3L3R5 266 aa30.95■■■□□ 2.54
SIX3-201ENST00000260653 CENPBP07199 599 aaPredicted RBP30.95■■■□□ 2.54
SIX3-201ENST00000260653 ZMYM3Q14202 1370 aa30.95■■■□□ 2.54
SIX3-201ENST00000260653 SETBP1Q9Y6X0 1596 aa30.9■■■□□ 2.54
SIX3-201ENST00000260653 VGFO15240 615 aaPredicted RBP30.9■■■□□ 2.54
SIX3-201ENST00000260653 C14orf93Q9H972 538 aaKnown RBP30.89■■■□□ 2.54
SIX3-201ENST00000260653 EIF3AQ14152 1382 aaKnown RBP30.88■■■□□ 2.53
SIX3-201ENST00000260653 TMF1P82094 1093 aa30.87■■■□□ 2.53
SIX3-201ENST00000260653 PRKRIP1Q9H875 184 aaPredicted RBP30.86■■■□□ 2.53
SIX3-201ENST00000260653 ADGRB1O14514 1584 aa30.85■■■□□ 2.53
SIX3-201ENST00000260653 ZFYVE9O95405 1425 aa30.85■■■□□ 2.53
SIX3-201ENST00000260653 STAG3Q9UJ98 1225 aa30.85■■■□□ 2.53
SIX3-201ENST00000260653 A2ML1A8K2U0 1454 aa30.82■■■□□ 2.52
SIX3-201ENST00000260653 TMEM132EQ6IEE7 984 aa30.81■■■□□ 2.52
SIX3-201ENST00000260653 SENP3Q9H4L4 574 aaPredicted RBP30.78■■■□□ 2.52
SIX3-201ENST00000260653 MYO3AQ8NEV4 1616 aa30.77■■■□□ 2.52
SIX3-201ENST00000260653 TNRQ92752 1358 aa30.76■■■□□ 2.51
SIX3-201ENST00000260653 TRAK1Q9UPV9 953 aa30.75■■■□□ 2.51
SIX3-201ENST00000260653 CNGB1Q14028 1251 aaPredicted RBP30.74■■■□□ 2.51
SIX3-201ENST00000260653 FER1L4A9Z1Z3 1794 aa30.72■■■□□ 2.51
SIX3-201ENST00000260653 ASXL1Q8IXJ9 1541 aa30.7■■■□□ 2.51
SIX3-201ENST00000260653 RIMS2Q9UQ26 1411 aa30.7■■■□□ 2.51
SIX3-201ENST00000260653 CEBPAP49715 358 aaPredicted RBP30.7■■■□□ 2.5
SIX3-201ENST00000260653 CENPJQ9HC77 1338 aaPredicted RBP30.69■■■□□ 2.5
SIX3-201ENST00000260653 CCDC184Q52MB2 194 aa30.69■■■□□ 2.5
SIX3-201ENST00000260653 CDCA8Q53HL2 280 aa30.68■■■□□ 2.5
SIX3-201ENST00000260653 SBNO2Q9Y2G9 1366 aa30.67■■■□□ 2.5
SIX3-201ENST00000260653 C3P01024 1663 aa30.67■■■□□ 2.5
SIX3-201ENST00000260653 QRICH2Q9H0J4 1663 aa30.66■■■□□ 2.5
SIX3-201ENST00000260653 KDM5AP29375 1690 aaKnown RBP30.65■■■□□ 2.5
SIX3-201ENST00000260653 ARHGEF28Q8N1W1 1705 aaKnown RBP30.65■■■□□ 2.5
SIX3-201ENST00000260653 PANK3Q9H999 370 aa30.64■■■□□ 2.5
SIX3-201ENST00000260653 ALKQ9UM73 1620 aa30.64■■■□□ 2.5
SIX3-201ENST00000260653 PER1O15534 1290 aaPredicted RBP30.64■■■□□ 2.49
SIX3-201ENST00000260653 SLC24A1O60721 1099 aa30.63■■■□□ 2.49
SIX3-201ENST00000260653 UBR1Q8IWV7 1749 aa30.62■■■□□ 2.49
SIX3-201ENST00000260653 MYOM1P52179 1685 aa30.62■■■□□ 2.49
SIX3-201ENST00000260653 PLPPR3Q6T4P5 718 aa30.59■■■□□ 2.49
SIX3-201ENST00000260653 MRS2Q9HD23 443 aa30.59■■■□□ 2.49
SIX3-201ENST00000260653 STK26Q9P289 416 aa30.58■■■□□ 2.49
SIX3-201ENST00000260653 NLRP1Q9C000 1473 aa30.57■■■□□ 2.48
SIX3-201ENST00000260653 PTPRMP28827 1452 aa30.55■■■□□ 2.48
SIX3-201ENST00000260653 YTHDC2Q9H6S0 1430 aaKnown RBP30.55■■■□□ 2.48
SIX3-201ENST00000260653 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.55■■■□□ 2.48
SIX3-201ENST00000260653 SETD1AO15047 1707 aaKnown RBP30.54■■■□□ 2.48
SIX3-201ENST00000260653 NRXN3Q9Y4C0 1643 aa30.53■■■□□ 2.48
SIX3-201ENST00000260653 TMEM2Q9UHN6 1383 aa30.53■■■□□ 2.48
SIX3-201ENST00000260653 KTN1Q86UP2 1357 aaKnown RBP30.52■■■□□ 2.48
SIX3-201ENST00000260653 RALBP1Q15311 655 aa30.5■■■□□ 2.47
SIX3-201ENST00000260653 SAFB2Q14151 953 aaKnown RBP eCLIP30.49■■■□□ 2.47
SIX3-201ENST00000260653 PARD3Q8TEW0 1356 aa30.49■■■□□ 2.47
SIX3-201ENST00000260653 CC2D1BQ5T0F9 858 aaKnown RBP30.47■■■□□ 2.47
SIX3-201ENST00000260653 RIMS1Q86UR5 1692 aaKnown RBP30.47■■■□□ 2.47
SIX3-201ENST00000260653 TULP4Q9NRJ4 1543 aa30.47■■■□□ 2.47
SIX3-201ENST00000260653 HDGFP51858 240 aaKnown RBP30.47■■■□□ 2.47
SIX3-201ENST00000260653 MYBBP1AQ9BQG0 1328 aaKnown RBP30.46■■■□□ 2.47
SIX3-201ENST00000260653 FAM9BQ8IZU0 186 aa30.45■■■□□ 2.47
SIX3-201ENST00000260653 PRAM1Q96QH2 718 aa30.44■■■□□ 2.46
SIX3-201ENST00000260653 SCAF1Q9H7N4 1312 aaKnown RBP30.44■■■□□ 2.46
SIX3-201ENST00000260653 KNSTRNQ9Y448 316 aa30.44■■■□□ 2.46
SIX3-201ENST00000260653 EVC2Q86UK5 1308 aa30.42■■■□□ 2.46
SIX3-201ENST00000260653 METP08581 1390 aa30.41■■■□□ 2.46
SIX3-201ENST00000260653 LRPPRCP42704 1394 aaKnown RBP30.41■■■□□ 2.46
SIX3-201ENST00000260653 LTKP29376 864 aa30.4■■■□□ 2.46
SIX3-201ENST00000260653 POGKQ9P215 609 aa30.4■■■□□ 2.46
SIX3-201ENST00000260653 ADAMTSL3P82987 1691 aa30.4■■■□□ 2.46
SIX3-201ENST00000260653 AMER1Q5JTC6 1135 aaPredicted RBP30.39■■■□□ 2.46
SIX3-201ENST00000260653 HNRNPUQ00839 825 aaKnown RBP eCLIP30.38■■■□□ 2.45
SIX3-201ENST00000260653 BCANQ96GW7 911 aa30.38■■■□□ 2.45
SIX3-201ENST00000260653 DLC1Q96QB1 1528 aa30.38■■■□□ 2.45
SIX3-201ENST00000260653 BRD4O60885 1362 aaPredicted RBP30.37■■■□□ 2.45
SIX3-201ENST00000260653 TMC1Q8TDI8 760 aa30.37■■■□□ 2.45
SIX3-201ENST00000260653 MINK1Q8N4C8 1332 aaPredicted RBP30.37■■■□□ 2.45
SIX3-201ENST00000260653 SLIT1O75093 1534 aa30.36■■■□□ 2.45
SIX3-201ENST00000260653 ABCC11Q96J66 1382 aa30.35■■■□□ 2.45
SIX3-201ENST00000260653 ARHGAP23Q9P227 1491 aa30.35■■■□□ 2.45
SIX3-201ENST00000260653 TXNDC2Q86VQ3 553 aa30.35■■■□□ 2.45
SIX3-201ENST00000260653 CABP2Q9NPB3 220 aa30.35■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms