RNA–Protein interactions for RNA: ENST00000258052.7

SMPD2-201, Transcript of sphingomyelin phosphodiesterase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD2, Length 1,645 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD2-201ENST00000258052 LAMC1P11047 1609 aa29.84■■■□□ 2.37
SMPD2-201ENST00000258052 STAG3Q9UJ98 1225 aa29.84■■■□□ 2.37
SMPD2-201ENST00000258052 GPRASP1Q5JY77 1395 aa29.84■■■□□ 2.37
SMPD2-201ENST00000258052 TNRQ92752 1358 aa29.84■■■□□ 2.37
SMPD2-201ENST00000258052 NEXMIFQ5QGS0 1516 aa29.83■■■□□ 2.37
SMPD2-201ENST00000258052 NRXN1Q9ULB1 1477 aa29.82■■■□□ 2.36
SMPD2-201ENST00000258052 KIAA1210Q9ULL0 1709 aa29.81■■■□□ 2.36
SMPD2-201ENST00000258052 CEBPAP49715 358 aaPredicted RBP29.81■■■□□ 2.36
SMPD2-201ENST00000258052 PLPPR3Q6T4P5 718 aa29.77■■■□□ 2.36
SMPD2-201ENST00000258052 RIMS1Q86UR5 1692 aaKnown RBP29.77■■■□□ 2.36
SMPD2-201ENST00000258052 NUTM2DQ5VT03 806 aaPredicted RBP29.76■■■□□ 2.35
SMPD2-201ENST00000258052 A2ML1A8K2U0 1454 aa29.75■■■□□ 2.35
SMPD2-201ENST00000258052 VGFO15240 615 aaPredicted RBP29.75■■■□□ 2.35
SMPD2-201ENST00000258052 ADAMTSL3P82987 1691 aa29.74■■■□□ 2.35
SMPD2-201ENST00000258052 PIK3C2GO75747 1445 aa29.74■■■□□ 2.35
SMPD2-201ENST00000258052 CFAP70Q5T0N1 1121 aa29.74■■■□□ 2.35
SMPD2-201ENST00000258052 ST20-MTHFSA0A0A6YYL1 179 aa29.71■■■□□ 2.35
SMPD2-201ENST00000258052 ZFYVE9O95405 1425 aa29.7■■■□□ 2.35
SMPD2-201ENST00000258052 DDX10Q13206 875 aaKnown RBP29.7■■■□□ 2.34
SMPD2-201ENST00000258052 IQGAP1P46940 1657 aa29.7■■■□□ 2.34
SMPD2-201ENST00000258052 POLR1AO95602 1720 aaPredicted RBP29.69■■■□□ 2.34
SMPD2-201ENST00000258052 WASHC2AQ641Q2 1341 aa29.69■■■□□ 2.34
SMPD2-201ENST00000258052 KDM5AP29375 1690 aaKnown RBP29.68■■■□□ 2.34
SMPD2-201ENST00000258052 NLRP1Q9C000 1473 aa29.67■■■□□ 2.34
SMPD2-201ENST00000258052 UBR1Q8IWV7 1749 aa29.67■■■□□ 2.34
SMPD2-201ENST00000258052 C11orf95C9JLR9 678 aaPredicted RBP29.67■■■□□ 2.34
SMPD2-201ENST00000258052 RIMS2Q9UQ26 1411 aa29.65■■■□□ 2.34
SMPD2-201ENST00000258052 SCAF11Q99590 1463 aaKnown RBP29.65■■■□□ 2.34
SMPD2-201ENST00000258052 C14orf93Q9H972 538 aaKnown RBP29.65■■■□□ 2.34
SMPD2-201ENST00000258052 SETBP1Q9Y6X0 1596 aa29.64■■■□□ 2.34
SMPD2-201ENST00000258052 CCDC7Q96M83 1385 aa29.64■■■□□ 2.34
SMPD2-201ENST00000258052 KIF7Q2M1P5 1343 aa29.6■■■□□ 2.33
SMPD2-201ENST00000258052 SENP3Q9H4L4 574 aaPredicted RBP29.59■■■□□ 2.33
SMPD2-201ENST00000258052 MYO3AQ8NEV4 1616 aa29.59■■■□□ 2.33
SMPD2-201ENST00000258052 ADGRB1O14514 1584 aa29.57■■■□□ 2.32
SMPD2-201ENST00000258052 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.56■■■□□ 2.32
SMPD2-201ENST00000258052 EIF3AQ14152 1382 aaKnown RBP29.56■■■□□ 2.32
SMPD2-201ENST00000258052 TMEM2Q9UHN6 1383 aa29.54■■■□□ 2.32
SMPD2-201ENST00000258052 HDGFP51858 240 aaKnown RBP29.53■■■□□ 2.32
SMPD2-201ENST00000258052 TMEM132EQ6IEE7 984 aa29.53■■■□□ 2.32
SMPD2-201ENST00000258052 MIER1Q8N108 512 aa29.53■■■□□ 2.32
SMPD2-201ENST00000258052 TESK2Q96S53 571 aa29.52■■■□□ 2.32
SMPD2-201ENST00000258052 POLR3GLQ9BT43 218 aa29.52■■■□□ 2.32
SMPD2-201ENST00000258052 ALKQ9UM73 1620 aa29.51■■■□□ 2.31
SMPD2-201ENST00000258052 ASXL1Q8IXJ9 1541 aa29.47■■■□□ 2.31
SMPD2-201ENST00000258052 CEP170BQ9Y4F5 1589 aaPredicted RBP29.47■■■□□ 2.31
SMPD2-201ENST00000258052 TRAK1Q9UPV9 953 aa29.47■■■□□ 2.31
SMPD2-201ENST00000258052 PTPRMP28827 1452 aa29.45■■■□□ 2.3
SMPD2-201ENST00000258052 TMF1P82094 1093 aa29.45■■■□□ 2.3
SMPD2-201ENST00000258052 NRXN3Q9Y4C0 1643 aa29.44■■■□□ 2.3
SMPD2-201ENST00000258052 THEMISQ8N1K5 641 aaPredicted RBP29.44■■■□□ 2.3
SMPD2-201ENST00000258052 DISP3Q9P2K9 1392 aa29.44■■■□□ 2.3
SMPD2-201ENST00000258052 SLIT1O75093 1534 aa29.43■■■□□ 2.3
SMPD2-201ENST00000258052 SETD1BQ9UPS6 1966 aaKnown RBP29.42■■■□□ 2.3
SMPD2-201ENST00000258052 SETD1AO15047 1707 aaKnown RBP29.42■■■□□ 2.3
SMPD2-201ENST00000258052 ARHGAP23Q9P227 1491 aa29.41■■■□□ 2.3
SMPD2-201ENST00000258052 ARHGEF28Q8N1W1 1705 aaKnown RBP29.41■■■□□ 2.3
SMPD2-201ENST00000258052 ZNF142P52746 1687 aaPredicted RBP29.41■■■□□ 2.3
SMPD2-201ENST00000258052 CENPJQ9HC77 1338 aaPredicted RBP29.4■■■□□ 2.3
SMPD2-201ENST00000258052 TXNDC2Q86VQ3 553 aa29.4■■■□□ 2.3
SMPD2-201ENST00000258052 BCANQ96GW7 911 aa29.4■■■□□ 2.3
SMPD2-201ENST00000258052 EID1Q9Y6B2 187 aa29.4■■■□□ 2.3
SMPD2-201ENST00000258052 LTKP29376 864 aa29.39■■■□□ 2.3
SMPD2-201ENST00000258052 QRICH2Q9H0J4 1663 aa29.38■■■□□ 2.29
SMPD2-201ENST00000258052 STK26Q9P289 416 aa29.38■■■□□ 2.29
SMPD2-201ENST00000258052 YTHDC2Q9H6S0 1430 aaKnown RBP29.37■■■□□ 2.29
SMPD2-201ENST00000258052 PLEKHG1Q9ULL1 1385 aa29.36■■■□□ 2.29
SMPD2-201ENST00000258052 SLC24A1O60721 1099 aa29.34■■■□□ 2.29
SMPD2-201ENST00000258052 SBNO2Q9Y2G9 1366 aa29.33■■■□□ 2.29
SMPD2-201ENST00000258052 ANP32CO43423 234 aa29.32■■■□□ 2.28
SMPD2-201ENST00000258052 CDCA8Q53HL2 280 aa29.31■■■□□ 2.28
SMPD2-201ENST00000258052 METP08581 1390 aa29.29■■■□□ 2.28
SMPD2-201ENST00000258052 LRPPRCP42704 1394 aaKnown RBP29.29■■■□□ 2.28
SMPD2-201ENST00000258052 ADAMTS13Q76LX8 1427 aa29.29■■■□□ 2.28
SMPD2-201ENST00000258052 DLC1Q96QB1 1528 aa29.25■■■□□ 2.27
SMPD2-201ENST00000258052 SAFB2Q14151 953 aaKnown RBP eCLIP29.24■■■□□ 2.27
SMPD2-201ENST00000258052 PRAM1Q96QH2 718 aa29.23■■■□□ 2.27
SMPD2-201ENST00000258052 POGKQ9P215 609 aa29.23■■■□□ 2.27
SMPD2-201ENST00000258052 ABCC11Q96J66 1382 aa29.23■■■□□ 2.27
SMPD2-201ENST00000258052 MED14O60244 1454 aa29.22■■■□□ 2.27
SMPD2-201ENST00000258052 KNDC1Q76NI1 1749 aa29.22■■■□□ 2.27
SMPD2-201ENST00000258052 SLC26A8Q96RN1 970 aa29.21■■■□□ 2.27
SMPD2-201ENST00000258052 ANKLE2Q86XL3 938 aa29.2■■■□□ 2.26
SMPD2-201ENST00000258052 DIP2AQ14689 1571 aa29.19■■■□□ 2.26
SMPD2-201ENST00000258052 MYOM1P52179 1685 aa29.18■■■□□ 2.26
SMPD2-201ENST00000258052 KDM4FA0A1W2PPD8 638 aa29.17■■■□□ 2.26
SMPD2-201ENST00000258052 EVC2Q86UK5 1308 aa29.17■■■□□ 2.26
SMPD2-201ENST00000258052 TULP4Q9NRJ4 1543 aa29.17■■■□□ 2.26
SMPD2-201ENST00000258052 TBX22Q9Y458 520 aa29.16■■■□□ 2.26
SMPD2-201ENST00000258052 MINK1Q8N4C8 1332 aaPredicted RBP29.15■■■□□ 2.26
SMPD2-201ENST00000258052 TECPR2O15040 1411 aa29.15■■■□□ 2.26
SMPD2-201ENST00000258052 CPS1P31327 1500 aa29.15■■■□□ 2.26
SMPD2-201ENST00000258052 WAPLQ7Z5K2 1190 aa29.14■■■□□ 2.26
SMPD2-201ENST00000258052 PANK3Q9H999 370 aa29.14■■■□□ 2.26
SMPD2-201ENST00000258052 PLEKHH1Q9ULM0 1364 aa29.13■■■□□ 2.25
SMPD2-201ENST00000258052 FAM135BQ49AJ0 1406 aa29.11■■■□□ 2.25
SMPD2-201ENST00000258052 SIRT1Q96EB6 747 aa29.1■■■□□ 2.25
SMPD2-201ENST00000258052 PRKRIP1Q9H875 184 aaPredicted RBP29.1■■■□□ 2.25
SMPD2-201ENST00000258052 PTPRUQ92729 1446 aa29.1■■■□□ 2.25
SMPD2-201ENST00000258052 CNGB1Q14028 1251 aaPredicted RBP29.09■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms