RNA–Protein interactions for RNA: ENST00000258052.7

SMPD2-201, Transcript of sphingomyelin phosphodiesterase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD2, Length 1,645 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD2-201ENST00000258052 LAMC1P11047 1609 aa29.84■■■□□ 2.37
SMPD2-201ENST00000258052 STAG3Q9UJ98 1225 aa29.84■■■□□ 2.37
SMPD2-201ENST00000258052 GPRASP1Q5JY77 1395 aa29.84■■■□□ 2.37
SMPD2-201ENST00000258052 TNRQ92752 1358 aa29.84■■■□□ 2.37
SMPD2-201ENST00000258052 NEXMIFQ5QGS0 1516 aa29.83■■■□□ 2.37
SMPD2-201ENST00000258052 NRXN1Q9ULB1 1477 aa29.82■■■□□ 2.36
SMPD2-201ENST00000258052 KIAA1210Q9ULL0 1709 aa29.81■■■□□ 2.36
SMPD2-201ENST00000258052 CEBPAP49715 358 aaPredicted RBP29.81■■■□□ 2.36
SMPD2-201ENST00000258052 PLPPR3Q6T4P5 718 aa29.77■■■□□ 2.36
SMPD2-201ENST00000258052 RIMS1Q86UR5 1692 aaKnown RBP29.77■■■□□ 2.36
SMPD2-201ENST00000258052 NUTM2DQ5VT03 806 aaPredicted RBP29.76■■■□□ 2.35
SMPD2-201ENST00000258052 A2ML1A8K2U0 1454 aa29.75■■■□□ 2.35
SMPD2-201ENST00000258052 VGFO15240 615 aaPredicted RBP29.75■■■□□ 2.35
SMPD2-201ENST00000258052 ADAMTSL3P82987 1691 aa29.74■■■□□ 2.35
SMPD2-201ENST00000258052 PIK3C2GO75747 1445 aa29.74■■■□□ 2.35
SMPD2-201ENST00000258052 CFAP70Q5T0N1 1121 aa29.74■■■□□ 2.35
SMPD2-201ENST00000258052 ST20-MTHFSA0A0A6YYL1 179 aa29.71■■■□□ 2.35
SMPD2-201ENST00000258052 ZFYVE9O95405 1425 aa29.7■■■□□ 2.35
SMPD2-201ENST00000258052 DDX10Q13206 875 aaKnown RBP29.7■■■□□ 2.34
SMPD2-201ENST00000258052 IQGAP1P46940 1657 aa29.7■■■□□ 2.34
SMPD2-201ENST00000258052 POLR1AO95602 1720 aaPredicted RBP29.69■■■□□ 2.34
SMPD2-201ENST00000258052 WASHC2AQ641Q2 1341 aa29.69■■■□□ 2.34
SMPD2-201ENST00000258052 KDM5AP29375 1690 aaKnown RBP29.68■■■□□ 2.34
SMPD2-201ENST00000258052 NLRP1Q9C000 1473 aa29.67■■■□□ 2.34
SMPD2-201ENST00000258052 UBR1Q8IWV7 1749 aa29.67■■■□□ 2.34
SMPD2-201ENST00000258052 C11orf95C9JLR9 678 aaPredicted RBP29.67■■■□□ 2.34
SMPD2-201ENST00000258052 RIMS2Q9UQ26 1411 aa29.65■■■□□ 2.34
SMPD2-201ENST00000258052 SCAF11Q99590 1463 aaKnown RBP29.65■■■□□ 2.34
SMPD2-201ENST00000258052 C14orf93Q9H972 538 aaKnown RBP29.65■■■□□ 2.34
SMPD2-201ENST00000258052 SETBP1Q9Y6X0 1596 aa29.64■■■□□ 2.34
SMPD2-201ENST00000258052 CCDC7Q96M83 1385 aa29.64■■■□□ 2.34
SMPD2-201ENST00000258052 KIF7Q2M1P5 1343 aa29.6■■■□□ 2.33
SMPD2-201ENST00000258052 SENP3Q9H4L4 574 aaPredicted RBP29.59■■■□□ 2.33
SMPD2-201ENST00000258052 MYO3AQ8NEV4 1616 aa29.59■■■□□ 2.33
SMPD2-201ENST00000258052 ADGRB1O14514 1584 aa29.57■■■□□ 2.32
SMPD2-201ENST00000258052 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.56■■■□□ 2.32
SMPD2-201ENST00000258052 EIF3AQ14152 1382 aaKnown RBP29.56■■■□□ 2.32
SMPD2-201ENST00000258052 TMEM2Q9UHN6 1383 aa29.54■■■□□ 2.32
SMPD2-201ENST00000258052 HDGFP51858 240 aaKnown RBP29.53■■■□□ 2.32
SMPD2-201ENST00000258052 TMEM132EQ6IEE7 984 aa29.53■■■□□ 2.32
SMPD2-201ENST00000258052 MIER1Q8N108 512 aa29.53■■■□□ 2.32
SMPD2-201ENST00000258052 TESK2Q96S53 571 aa29.52■■■□□ 2.32
SMPD2-201ENST00000258052 POLR3GLQ9BT43 218 aa29.52■■■□□ 2.32
SMPD2-201ENST00000258052 ALKQ9UM73 1620 aa29.51■■■□□ 2.31
SMPD2-201ENST00000258052 ASXL1Q8IXJ9 1541 aa29.47■■■□□ 2.31
SMPD2-201ENST00000258052 CEP170BQ9Y4F5 1589 aaPredicted RBP29.47■■■□□ 2.31
SMPD2-201ENST00000258052 TRAK1Q9UPV9 953 aa29.47■■■□□ 2.31
SMPD2-201ENST00000258052 PTPRMP28827 1452 aa29.45■■■□□ 2.3
SMPD2-201ENST00000258052 TMF1P82094 1093 aa29.45■■■□□ 2.3
SMPD2-201ENST00000258052 NRXN3Q9Y4C0 1643 aa29.44■■■□□ 2.3
SMPD2-201ENST00000258052 THEMISQ8N1K5 641 aaPredicted RBP29.44■■■□□ 2.3
SMPD2-201ENST00000258052 DISP3Q9P2K9 1392 aa29.44■■■□□ 2.3
SMPD2-201ENST00000258052 SLIT1O75093 1534 aa29.43■■■□□ 2.3
SMPD2-201ENST00000258052 SETD1BQ9UPS6 1966 aaKnown RBP29.42■■■□□ 2.3
SMPD2-201ENST00000258052 SETD1AO15047 1707 aaKnown RBP29.42■■■□□ 2.3
SMPD2-201ENST00000258052 ARHGAP23Q9P227 1491 aa29.41■■■□□ 2.3
SMPD2-201ENST00000258052 ARHGEF28Q8N1W1 1705 aaKnown RBP29.41■■■□□ 2.3
SMPD2-201ENST00000258052 ZNF142P52746 1687 aaPredicted RBP29.41■■■□□ 2.3
SMPD2-201ENST00000258052 CENPJQ9HC77 1338 aaPredicted RBP29.4■■■□□ 2.3
SMPD2-201ENST00000258052 TXNDC2Q86VQ3 553 aa29.4■■■□□ 2.3
SMPD2-201ENST00000258052 BCANQ96GW7 911 aa29.4■■■□□ 2.3
SMPD2-201ENST00000258052 EID1Q9Y6B2 187 aa29.4■■■□□ 2.3
SMPD2-201ENST00000258052 LTKP29376 864 aa29.39■■■□□ 2.3
SMPD2-201ENST00000258052 QRICH2Q9H0J4 1663 aa29.38■■■□□ 2.29
SMPD2-201ENST00000258052 STK26Q9P289 416 aa29.38■■■□□ 2.29
SMPD2-201ENST00000258052 YTHDC2Q9H6S0 1430 aaKnown RBP29.37■■■□□ 2.29
SMPD2-201ENST00000258052 PLEKHG1Q9ULL1 1385 aa29.36■■■□□ 2.29
SMPD2-201ENST00000258052 SLC24A1O60721 1099 aa29.34■■■□□ 2.29
SMPD2-201ENST00000258052 SBNO2Q9Y2G9 1366 aa29.33■■■□□ 2.29
SMPD2-201ENST00000258052 ANP32CO43423 234 aa29.32■■■□□ 2.28
SMPD2-201ENST00000258052 CDCA8Q53HL2 280 aa29.31■■■□□ 2.28
SMPD2-201ENST00000258052 METP08581 1390 aa29.29■■■□□ 2.28
SMPD2-201ENST00000258052 LRPPRCP42704 1394 aaKnown RBP29.29■■■□□ 2.28
SMPD2-201ENST00000258052 ADAMTS13Q76LX8 1427 aa29.29■■■□□ 2.28
SMPD2-201ENST00000258052 DLC1Q96QB1 1528 aa29.25■■■□□ 2.27
SMPD2-201ENST00000258052 SAFB2Q14151 953 aaKnown RBP eCLIP29.24■■■□□ 2.27
SMPD2-201ENST00000258052 PRAM1Q96QH2 718 aa29.23■■■□□ 2.27
SMPD2-201ENST00000258052 POGKQ9P215 609 aa29.23■■■□□ 2.27
SMPD2-201ENST00000258052 ABCC11Q96J66 1382 aa29.23■■■□□ 2.27
SMPD2-201ENST00000258052 MED14O60244 1454 aa29.22■■■□□ 2.27
SMPD2-201ENST00000258052 KNDC1Q76NI1 1749 aa29.22■■■□□ 2.27
SMPD2-201ENST00000258052 SLC26A8Q96RN1 970 aa29.21■■■□□ 2.27
SMPD2-201ENST00000258052 ANKLE2Q86XL3 938 aa29.2■■■□□ 2.26
SMPD2-201ENST00000258052 DIP2AQ14689 1571 aa29.19■■■□□ 2.26
SMPD2-201ENST00000258052 MYOM1P52179 1685 aa29.18■■■□□ 2.26
SMPD2-201ENST00000258052 KDM4FA0A1W2PPD8 638 aa29.17■■■□□ 2.26
SMPD2-201ENST00000258052 EVC2Q86UK5 1308 aa29.17■■■□□ 2.26
SMPD2-201ENST00000258052 TULP4Q9NRJ4 1543 aa29.17■■■□□ 2.26
SMPD2-201ENST00000258052 TBX22Q9Y458 520 aa29.16■■■□□ 2.26
SMPD2-201ENST00000258052 MINK1Q8N4C8 1332 aaPredicted RBP29.15■■■□□ 2.26
SMPD2-201ENST00000258052 TECPR2O15040 1411 aa29.15■■■□□ 2.26
SMPD2-201ENST00000258052 CPS1P31327 1500 aa29.15■■■□□ 2.26
SMPD2-201ENST00000258052 WAPLQ7Z5K2 1190 aa29.14■■■□□ 2.26
SMPD2-201ENST00000258052 PANK3Q9H999 370 aa29.14■■■□□ 2.26
SMPD2-201ENST00000258052 PLEKHH1Q9ULM0 1364 aa29.13■■■□□ 2.25
SMPD2-201ENST00000258052 FAM135BQ49AJ0 1406 aa29.11■■■□□ 2.25
SMPD2-201ENST00000258052 SIRT1Q96EB6 747 aa29.1■■■□□ 2.25
SMPD2-201ENST00000258052 PRKRIP1Q9H875 184 aaPredicted RBP29.1■■■□□ 2.25
SMPD2-201ENST00000258052 PTPRUQ92729 1446 aa29.1■■■□□ 2.25
SMPD2-201ENST00000258052 CNGB1Q14028 1251 aaPredicted RBP29.09■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms