RNA–Protein interactions for RNA: ENST00000257189.4

DSG3-201, Transcript of desmoglein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DSG3, Length 5,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DSG3-201ENST00000257189 SMARCA4P51532 1647 aa10.02□□□□□ -0.81
DSG3-201ENST00000257189 TAOK2Q9UL54 1235 aa10.02□□□□□ -0.81
DSG3-201ENST00000257189 FMN1Q68DA7 1419 aa10.02□□□□□ -0.81
DSG3-201ENST00000257189 CAVIN1Q6NZI2 390 aaKnown RBP10.02□□□□□ -0.81
DSG3-201ENST00000257189 RRP9O43818 475 aaKnown RBP10.01□□□□□ -0.81
DSG3-201ENST00000257189 STK11IPQ8N1F8 1099 aa10.01□□□□□ -0.81
DSG3-201ENST00000257189 LEKR1Q6ZMV7 388 aa10.01□□□□□ -0.81
DSG3-201ENST00000257189 RASSF8Q8NHQ8 419 aa10.01□□□□□ -0.81
DSG3-201ENST00000257189 LMTK3Q96Q04 1460 aa10.01□□□□□ -0.81
DSG3-201ENST00000257189 NEXNQ0ZGT2 675 aa10.01□□□□□ -0.81
DSG3-201ENST00000257189 SYTL4Q96C24 671 aaPredicted RBP10.01□□□□□ -0.81
DSG3-201ENST00000257189 MYO6Q9UM54 1294 aa10.01□□□□□ -0.81
DSG3-201ENST00000257189 ITPRIPQ8IWB1 547 aa10□□□□□ -0.81
DSG3-201ENST00000257189 CCDC47Q96A33 483 aaKnown RBP10□□□□□ -0.81
DSG3-201ENST00000257189 ZRANB1Q9UGI0 708 aa10□□□□□ -0.81
DSG3-201ENST00000257189 HOMER1Q86YM7 354 aa10□□□□□ -0.81
DSG3-201ENST00000257189 CCDC88BA6NC98 1476 aa10□□□□□ -0.81
DSG3-201ENST00000257189 NUCB2P80303 420 aa10□□□□□ -0.81
DSG3-201ENST00000257189 CC2D1BQ5T0F9 858 aaKnown RBP10□□□□□ -0.81
DSG3-201ENST00000257189 RTF1Q92541 710 aaKnown RBP10□□□□□ -0.81
DSG3-201ENST00000257189 PRM3Q9NNZ6 103 aa10□□□□□ -0.81
DSG3-201ENST00000257189 ROCK2O75116 1388 aaKnown RBP10□□□□□ -0.81
DSG3-201ENST00000257189 PATL2C9JE40 543 aaKnown RBP9.99□□□□□ -0.81
DSG3-201ENST00000257189 CAPN15O75808 1086 aa9.99□□□□□ -0.81
DSG3-201ENST00000257189 PDE4AP27815 886 aa9.99□□□□□ -0.81
DSG3-201ENST00000257189 MORC1Q86VD1 984 aa9.99□□□□□ -0.81
DSG3-201ENST00000257189 GOLGA6L7A0A1B0GV03 622 aa9.99□□□□□ -0.81
DSG3-201ENST00000257189 LETM1O95202 739 aaPredicted RBP9.99□□□□□ -0.81
DSG3-201ENST00000257189 INCENPQ9NQS7 918 aa9.99□□□□□ -0.81
DSG3-201ENST00000257189 ZNF592Q92610 1267 aa9.99□□□□□ -0.81
DSG3-201ENST00000257189 AKNAQ7Z591 1439 aa9.99□□□□□ -0.81
DSG3-201ENST00000257189 NUTM2FA1L443 756 aa9.98□□□□□ -0.81
DSG3-201ENST00000257189 SNAPC4Q5SXM2 1469 aa9.98□□□□□ -0.81
DSG3-201ENST00000257189 H3BQV1 296 aa9.98□□□□□ -0.81
DSG3-201ENST00000257189 IFFO2Q5TF58 517 aa9.98□□□□□ -0.81
DSG3-201ENST00000257189 CWC22Q9HCG8 908 aaKnown RBP9.98□□□□□ -0.81
DSG3-201ENST00000257189 VGFO15240 615 aaPredicted RBP9.98□□□□□ -0.81
DSG3-201ENST00000257189 CAGE1Q8TC20 777 aa9.98□□□□□ -0.81
DSG3-201ENST00000257189 TOP2AP11388 1531 aaKnown RBP9.97□□□□□ -0.81
DSG3-201ENST00000257189 CCDC18Q5T9S5 1454 aa9.97□□□□□ -0.81
DSG3-201ENST00000257189 AAMPQ13685 434 aa9.97□□□□□ -0.81
DSG3-201ENST00000257189 ANKRD30AQ9BXX3 1397 aa9.97□□□□□ -0.81
DSG3-201ENST00000257189 SYNJ2O15056 1496 aa9.97□□□□□ -0.81
DSG3-201ENST00000257189 PDCL2Q8N4E4 241 aa9.96□□□□□ -0.81
DSG3-201ENST00000257189 BEGAINQ9BUH8 593 aa9.96□□□□□ -0.81
DSG3-201ENST00000257189 CCDC173Q0VFZ6 552 aa9.96□□□□□ -0.81
DSG3-201ENST00000257189 DEF6Q9H4E7 631 aa9.96□□□□□ -0.81
DSG3-201ENST00000257189 LMOD3Q0VAK6 560 aa9.96□□□□□ -0.82
DSG3-201ENST00000257189 GPRASP1Q5JY77 1395 aa9.96□□□□□ -0.82
DSG3-201ENST00000257189 CPLX2Q6PUV4 134 aaKnown RBP9.96□□□□□ -0.82
DSG3-201ENST00000257189 NGEFQ8N5V2 710 aa9.96□□□□□ -0.82
DSG3-201ENST00000257189 FAM184AQ8NB25 1140 aa9.96□□□□□ -0.82
DSG3-201ENST00000257189 REC8O95072 547 aa9.95□□□□□ -0.82
DSG3-201ENST00000257189 CENPJQ9HC77 1338 aaPredicted RBP9.95□□□□□ -0.82
DSG3-201ENST00000257189 STK31Q9BXU1 1019 aa9.95□□□□□ -0.82
DSG3-201ENST00000257189 CD109Q6YHK3 1445 aa9.95□□□□□ -0.82
DSG3-201ENST00000257189 RAPGEF2Q9Y4G8 1499 aa9.95□□□□□ -0.82
DSG3-201ENST00000257189 LRRFIP1Q32MZ4 808 aaKnown RBP9.95□□□□□ -0.82
DSG3-201ENST00000257189 CGNL1Q0VF96 1302 aa9.95□□□□□ -0.82
DSG3-201ENST00000257189 FGD5Q6ZNL6 1462 aa9.95□□□□□ -0.82
DSG3-201ENST00000257189 TRIM6-TRIM34B2RNG4 842 aa9.94□□□□□ -0.82
DSG3-201ENST00000257189 WDHD1O75717 1129 aaPredicted RBP9.94□□□□□ -0.82
DSG3-201ENST00000257189 AMPHP49418 695 aa9.94□□□□□ -0.82
DSG3-201ENST00000257189 NAT10Q9H0A0 1025 aaKnown RBP9.94□□□□□ -0.82
DSG3-201ENST00000257189 KIAA0754O94854 1291 aa9.94□□□□□ -0.82
DSG3-201ENST00000257189 NEFHP12036 1026 aa9.94□□□□□ -0.82
DSG3-201ENST00000257189 HMGXB3Q12766 1538 aa9.94□□□□□ -0.82
DSG3-201ENST00000257189 IFT57Q9NWB7 429 aa9.94□□□□□ -0.82
DSG3-201ENST00000257189 RAD54L2Q9Y4B4 1467 aa9.93□□□□□ -0.82
DSG3-201ENST00000257189 SASS6Q6UVJ0 657 aa9.93□□□□□ -0.82
DSG3-201ENST00000257189 R3HCC1Q9Y3T6 440 aaKnown RBP9.93□□□□□ -0.82
DSG3-201ENST00000257189 PES1O00541 588 aaKnown RBP9.93□□□□□ -0.82
DSG3-201ENST00000257189 RUFY2Q8WXA3 655 aa9.93□□□□□ -0.82
DSG3-201ENST00000257189 SMC4Q9NTJ3 1288 aa9.92□□□□□ -0.82
DSG3-201ENST00000257189 PLB1Q6P1J6 1458 aa9.92□□□□□ -0.82
DSG3-201ENST00000257189 EIF3JO75822 258 aaKnown RBP9.92□□□□□ -0.82
DSG3-201ENST00000257189 ADAMTS2O95450 1211 aa9.92□□□□□ -0.82
DSG3-201ENST00000257189 CREBRFQ8IUR6 639 aa9.92□□□□□ -0.82
DSG3-201ENST00000257189 RAPGEF3O95398 923 aa9.92□□□□□ -0.82
DSG3-201ENST00000257189 MBD3O95983 291 aa9.92□□□□□ -0.82
DSG3-201ENST00000257189 HSPA5P11021 654 aaKnown RBP9.92□□□□□ -0.82
DSG3-201ENST00000257189 ESCO1Q5FWF5 840 aa9.92□□□□□ -0.82
DSG3-201ENST00000257189 RNF20Q5VTR2 975 aa9.92□□□□□ -0.82
DSG3-201ENST00000257189 NASPP49321 788 aaPredicted RBP9.92□□□□□ -0.82
DSG3-201ENST00000257189 NCBP3Q53F19 620 aaKnown RBP9.92□□□□□ -0.82
DSG3-201ENST00000257189 NLRP13Q86W25 1043 aa9.92□□□□□ -0.82
DSG3-201ENST00000257189 TAF7LQ5H9L4 462 aa9.91□□□□□ -0.82
DSG3-201ENST00000257189 PRKCSHP14314 528 aaPredicted RBP9.91□□□□□ -0.82
DSG3-201ENST00000257189 GRM1Q13255 1194 aa9.91□□□□□ -0.82
DSG3-201ENST00000257189 GORABQ5T7V8 394 aa9.91□□□□□ -0.82
DSG3-201ENST00000257189 EIF3AQ14152 1382 aaKnown RBP9.91□□□□□ -0.82
DSG3-201ENST00000257189 POLD1P28340 1107 aa9.91□□□□□ -0.82
DSG3-201ENST00000257189 SETD5Q9C0A6 1442 aa9.9□□□□□ -0.82
DSG3-201ENST00000257189 STRN4Q9NRL3 753 aa9.9□□□□□ -0.82
DSG3-201ENST00000257189 MARCH6O60337 910 aa9.9□□□□□ -0.82
DSG3-201ENST00000257189 ERLIN1O75477 346 aa9.9□□□□□ -0.82
DSG3-201ENST00000257189 AKAP17AQ02040 695 aaKnown RBP9.9□□□□□ -0.82
DSG3-201ENST00000257189 KIF7Q2M1P5 1343 aa9.9□□□□□ -0.82
DSG3-201ENST00000257189 HSPA2P54652 639 aa9.9□□□□□ -0.83
DSG3-201ENST00000257189 HSP90AB3PQ58FF7 597 aa9.9□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 315.3 ms