RNA–Protein interactions for RNA: ENST00000255390.9

SCO1-201, Transcript of SCO1, cytochrome c oxidase assembly protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCO1, Length 9,612 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCO1-201ENST00000255390 CAGE1Q8TC20 777 aa13.83□□□□□ -0.2
SCO1-201ENST00000255390 ANO2Q9NQ90 1003 aa13.83□□□□□ -0.2
SCO1-201ENST00000255390 CCDC27Q2M243 656 aa13.83□□□□□ -0.2
SCO1-201ENST00000255390 SLC4A3P48751 1232 aa13.82□□□□□ -0.2
SCO1-201ENST00000255390 SYCP1Q15431 976 aa13.82□□□□□ -0.2
SCO1-201ENST00000255390 ZKSCAN1P17029 563 aaPredicted RBP13.82□□□□□ -0.2
SCO1-201ENST00000255390 NUTM2DQ5VT03 806 aaPredicted RBP13.82□□□□□ -0.2
SCO1-201ENST00000255390 KIF27Q86VH2 1401 aa13.82□□□□□ -0.2
SCO1-201ENST00000255390 CCDC146Q8IYE0 955 aa13.82□□□□□ -0.2
SCO1-201ENST00000255390 BICD2Q8TD16 824 aa13.81□□□□□ -0.2
SCO1-201ENST00000255390 RSPH6AQ9H0K4 717 aa13.81□□□□□ -0.2
SCO1-201ENST00000255390 CENPJQ9HC77 1338 aaPredicted RBP13.81□□□□□ -0.2
SCO1-201ENST00000255390 HSP90B2PQ58FF3 399 aa13.81□□□□□ -0.2
SCO1-201ENST00000255390 H0YHG0 523 aa13.81□□□□□ -0.2
SCO1-201ENST00000255390 MTMR7Q9Y216 660 aa13.8□□□□□ -0.2
SCO1-201ENST00000255390 IFIT2P09913 472 aaKnown RBP13.8□□□□□ -0.2
SCO1-201ENST00000255390 SKIDA1Q1XH10 827 aa13.8□□□□□ -0.2
SCO1-201ENST00000255390 FOSBP53539 338 aa13.8□□□□□ -0.2
SCO1-201ENST00000255390 ANKRD45Q5TZF3 282 aa13.8□□□□□ -0.2
SCO1-201ENST00000255390 EIF2S2P20042 333 aaKnown RBP13.8□□□□□ -0.2
SCO1-201ENST00000255390 SEPT7Q16181 437 aaKnown RBP13.8□□□□□ -0.2
SCO1-201ENST00000255390 ANKRD62A6NC57 917 aa13.8□□□□□ -0.2
SCO1-201ENST00000255390 DDX49Q9Y6V7 483 aaKnown RBP13.79□□□□□ -0.2
SCO1-201ENST00000255390 PLCD4Q9BRC7 762 aa13.79□□□□□ -0.2
SCO1-201ENST00000255390 RNF20Q5VTR2 975 aa13.79□□□□□ -0.2
SCO1-201ENST00000255390 RALBP1Q15311 655 aa13.78□□□□□ -0.2
SCO1-201ENST00000255390 ARGLU1Q9NWB6 273 aaPredicted RBP13.78□□□□□ -0.2
SCO1-201ENST00000255390 ANKRD18AQ8IVF6 992 aa13.78□□□□□ -0.2
SCO1-201ENST00000255390 DDX58O95786 925 aaKnown RBP13.77□□□□□ -0.2
SCO1-201ENST00000255390 XBP1P17861 261 aa13.77□□□□□ -0.2
SCO1-201ENST00000255390 SF3B2Q13435 895 aaKnown RBP13.77□□□□□ -0.2
SCO1-201ENST00000255390 RBM19Q9Y4C8 960 aaKnown RBP13.77□□□□□ -0.2
SCO1-201ENST00000255390 CDK5RAP3Q96JB5 506 aa13.77□□□□□ -0.21
SCO1-201ENST00000255390 SASS6Q6UVJ0 657 aa13.77□□□□□ -0.21
SCO1-201ENST00000255390 CEP162Q5TB80 1403 aa13.77□□□□□ -0.21
SCO1-201ENST00000255390 OLFM4Q6UX06 510 aa13.77□□□□□ -0.21
SCO1-201ENST00000255390 SKOR2Q2VWA4 1001 aaPredicted RBP13.76□□□□□ -0.21
SCO1-201ENST00000255390 FHAD1B1AJZ9 1412 aa13.76□□□□□ -0.21
SCO1-201ENST00000255390 CWC15Q9P013 229 aaKnown RBP13.76□□□□□ -0.21
SCO1-201ENST00000255390 TTLL5Q6EMB2 1281 aa13.75□□□□□ -0.21
SCO1-201ENST00000255390 RALYLQ86SE5 291 aaKnown RBP13.75□□□□□ -0.21
SCO1-201ENST00000255390 WASHC2CQ9Y4E1 1318 aa13.75□□□□□ -0.21
SCO1-201ENST00000255390 PSME1Q06323 249 aa13.75□□□□□ -0.21
SCO1-201ENST00000255390 PKD2Q13563 968 aa13.75□□□□□ -0.21
SCO1-201ENST00000255390 PDILTQ8N807 584 aa13.75□□□□□ -0.21
SCO1-201ENST00000255390 MNS1Q8NEH6 495 aa13.75□□□□□ -0.21
SCO1-201ENST00000255390 COG3Q96JB2 828 aa13.75□□□□□ -0.21
SCO1-201ENST00000255390 NECTIN2Q92692 538 aa13.75□□□□□ -0.21
SCO1-201ENST00000255390 G3BP1Q13283 466 aaKnown RBP eCLIP13.74□□□□□ -0.21
SCO1-201ENST00000255390 CGNL1Q0VF96 1302 aa13.74□□□□□ -0.21
SCO1-201ENST00000255390 NEBLO76041 1014 aa13.74□□□□□ -0.21
SCO1-201ENST00000255390 HSP90AB4PQ58FF6 505 aa13.74□□□□□ -0.21
SCO1-201ENST00000255390 FOXD1Q16676 465 aa13.74□□□□□ -0.21
SCO1-201ENST00000255390 BAZ1BQ9UIG0 1483 aaKnown RBP13.74□□□□□ -0.21
SCO1-201ENST00000255390 ENOX2Q16206 610 aaKnown RBP13.73□□□□□ -0.21
SCO1-201ENST00000255390 REC8O95072 547 aa13.73□□□□□ -0.21
SCO1-201ENST00000255390 KRT18P05783 430 aaKnown RBP13.73□□□□□ -0.21
SCO1-201ENST00000255390 NAT10Q9H0A0 1025 aaKnown RBP13.73□□□□□ -0.21
SCO1-201ENST00000255390 ERLIN2O94905 339 aa13.73□□□□□ -0.21
SCO1-201ENST00000255390 RB1CC1Q8TDY2 1594 aa13.72□□□□□ -0.21
SCO1-201ENST00000255390 PLIN1O60240 522 aa13.72□□□□□ -0.21
SCO1-201ENST00000255390 SPDYE4A6NLX3 237 aa13.71□□□□□ -0.21
SCO1-201ENST00000255390 MAGEC2Q9UBF1 373 aaPredicted RBP13.71□□□□□ -0.21
SCO1-201ENST00000255390 ARHGAP35Q9NRY4 1499 aa13.71□□□□□ -0.21
SCO1-201ENST00000255390 EZRP15311 586 aaKnown RBP13.71□□□□□ -0.21
SCO1-201ENST00000255390 CHMP5Q9NZZ3 219 aa13.71□□□□□ -0.21
SCO1-201ENST00000255390 SLC3A2P08195 630 aaKnown RBP13.71□□□□□ -0.21
SCO1-201ENST00000255390 CCDC73Q6ZRK6 1079 aa13.71□□□□□ -0.21
SCO1-201ENST00000255390 VPS37CA5D8V6 355 aaPredicted RBP13.71□□□□□ -0.22
SCO1-201ENST00000255390 ELL2O00472 640 aaPredicted RBP13.71□□□□□ -0.22
SCO1-201ENST00000255390 ATP2B2Q01814 1243 aa13.71□□□□□ -0.22
SCO1-201ENST00000255390 PDCL3Q9H2J4 239 aa13.71□□□□□ -0.22
SCO1-201ENST00000255390 IFT57Q9NWB7 429 aa13.71□□□□□ -0.22
SCO1-201ENST00000255390 DESP17661 470 aa13.7□□□□□ -0.22
SCO1-201ENST00000255390 STK11IPQ8N1F8 1099 aa13.7□□□□□ -0.22
SCO1-201ENST00000255390 IPO9Q96P70 1041 aaKnown RBP13.7□□□□□ -0.22
SCO1-201ENST00000255390 TRIM21P19474 475 aaKnown RBP13.7□□□□□ -0.22
SCO1-201ENST00000255390 IBSPP21815 317 aaPredicted RBP13.7□□□□□ -0.22
SCO1-201ENST00000255390 BCL11BQ9C0K0 894 aaPredicted RBP13.7□□□□□ -0.22
SCO1-201ENST00000255390 WASHC4Q2M389 1173 aa13.7□□□□□ -0.22
SCO1-201ENST00000255390 ERCC4Q92889 916 aaPredicted RBP13.7□□□□□ -0.22
SCO1-201ENST00000255390 FAM13BQ9NYF5 915 aa13.7□□□□□ -0.22
SCO1-201ENST00000255390 RRP7AQ9Y3A4 280 aaKnown RBP13.7□□□□□ -0.22
SCO1-201ENST00000255390 KIF3BO15066 747 aa13.69□□□□□ -0.22
SCO1-201ENST00000255390 MATR3P43243 847 aaKnown RBP eCLIP13.69□□□□□ -0.22
SCO1-201ENST00000255390 HSPA5P11021 654 aaKnown RBP13.69□□□□□ -0.22
SCO1-201ENST00000255390 CARMIL2Q6F5E8 1435 aa13.69□□□□□ -0.22
SCO1-201ENST00000255390 TXLNAP40222 546 aa13.69□□□□□ -0.22
SCO1-201ENST00000255390 SART3Q15020 963 aaKnown RBP13.69□□□□□ -0.22
SCO1-201ENST00000255390 HSP90AB3PQ58FF7 597 aa13.69□□□□□ -0.22
SCO1-201ENST00000255390 EEA1Q15075 1411 aa13.69□□□□□ -0.22
SCO1-201ENST00000255390 GBP2P32456 591 aaPredicted RBP13.69□□□□□ -0.22
SCO1-201ENST00000255390 NEUROD6Q96NK8 337 aa13.68□□□□□ -0.22
SCO1-201ENST00000255390 KDM4AO75164 1064 aa13.68□□□□□ -0.22
SCO1-201ENST00000255390 NUP155O75694 1391 aa13.68□□□□□ -0.22
SCO1-201ENST00000255390 ROCK1Q13464 1354 aa13.68□□□□□ -0.22
SCO1-201ENST00000255390 GOLGA6L10A6NI86 522 aa13.67□□□□□ -0.22
SCO1-201ENST00000255390 MPHOSPH10O00566 681 aaKnown RBP13.67□□□□□ -0.22
SCO1-201ENST00000255390 HMGN5P82970 282 aaKnown RBP13.67□□□□□ -0.22
SCO1-201ENST00000255390 SMC3Q9UQE7 1217 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms