RNA–Protein interactions for RNA: ENST00000254605.10

RRP8-201, Transcript of ribosomal RNA processing 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RRP8, Length 6,560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP8-201ENST00000254605 ATP2B2Q01814 1243 aa10.69□□□□□ -0.7
RRP8-201ENST00000254605 SF3B2Q13435 895 aaKnown RBP10.69□□□□□ -0.7
RRP8-201ENST00000254605 ANO2Q9NQ90 1003 aa10.69□□□□□ -0.7
RRP8-201ENST00000254605 MYCNP04198 464 aaPredicted RBP10.68□□□□□ -0.7
RRP8-201ENST00000254605 TOP2AP11388 1531 aaKnown RBP10.68□□□□□ -0.7
RRP8-201ENST00000254605 COG3Q96JB2 828 aa10.68□□□□□ -0.7
RRP8-201ENST00000254605 SYAP1Q96A49 352 aaPredicted RBP10.68□□□□□ -0.7
RRP8-201ENST00000254605 NEUROD6Q96NK8 337 aa10.68□□□□□ -0.7
RRP8-201ENST00000254605 TPM2P07951 284 aa10.68□□□□□ -0.7
RRP8-201ENST00000254605 PPM1FP49593 454 aaPredicted RBP10.68□□□□□ -0.7
RRP8-201ENST00000254605 JPH4Q96JJ6 628 aa10.68□□□□□ -0.7
RRP8-201ENST00000254605 FAM69CQ0P6D2 419 aa10.67□□□□□ -0.7
RRP8-201ENST00000254605 PAXIP1Q6ZW49 1069 aaPredicted RBP10.67□□□□□ -0.7
RRP8-201ENST00000254605 RBM42Q9BTD8 480 aaKnown RBP10.67□□□□□ -0.7
RRP8-201ENST00000254605 ATF3P18847 181 aa10.67□□□□□ -0.7
RRP8-201ENST00000254605 TRIM29Q14134 588 aa10.67□□□□□ -0.7
RRP8-201ENST00000254605 CT47A1Q5JQC4 288 aaPredicted RBP10.67□□□□□ -0.7
RRP8-201ENST00000254605 NEXNQ0ZGT2 675 aa10.66□□□□□ -0.7
RRP8-201ENST00000254605 NLRP2Q9NX02 1062 aa10.66□□□□□ -0.7
RRP8-201ENST00000254605 R3HCC1Q9Y3T6 440 aaKnown RBP10.66□□□□□ -0.7
RRP8-201ENST00000254605 ANKRD30AQ9BXX3 1397 aa10.66□□□□□ -0.7
RRP8-201ENST00000254605 ODF2Q5BJF6 829 aa10.65□□□□□ -0.7
RRP8-201ENST00000254605 DIAPH3Q9NSV4 1193 aa10.65□□□□□ -0.7
RRP8-201ENST00000254605 TTLL5Q6EMB2 1281 aa10.65□□□□□ -0.7
RRP8-201ENST00000254605 DHX37Q8IY37 1157 aaKnown RBP10.65□□□□□ -0.7
RRP8-201ENST00000254605 HMOX1P09601 288 aa10.65□□□□□ -0.71
RRP8-201ENST00000254605 CENPJQ9HC77 1338 aaPredicted RBP10.65□□□□□ -0.71
RRP8-201ENST00000254605 SETD5Q9C0A6 1442 aa10.64□□□□□ -0.71
RRP8-201ENST00000254605 OSCARQ8IYS5 282 aa10.64□□□□□ -0.71
RRP8-201ENST00000254605 PMFBP1Q8TBY8 1022 aa10.64□□□□□ -0.71
RRP8-201ENST00000254605 WASHC4Q2M389 1173 aa10.64□□□□□ -0.71
RRP8-201ENST00000254605 RBM5P52756 815 aaKnown RBP eCLIP10.64□□□□□ -0.71
RRP8-201ENST00000254605 CPLX1O14810 134 aa10.64□□□□□ -0.71
RRP8-201ENST00000254605 IFIT2P09913 472 aaKnown RBP10.64□□□□□ -0.71
RRP8-201ENST00000254605 GOLGA6L19H0YKK7 550 aa10.63□□□□□ -0.71
RRP8-201ENST00000254605 BECN2A8MW95 431 aa10.63□□□□□ -0.71
RRP8-201ENST00000254605 ERICH2A1L162 156 aa10.63□□□□□ -0.71
RRP8-201ENST00000254605 CFAP44Q96MT7 982 aa10.63□□□□□ -0.71
RRP8-201ENST00000254605 EIF3AQ14152 1382 aaKnown RBP10.63□□□□□ -0.71
RRP8-201ENST00000254605 ST18O60284 1047 aa10.62□□□□□ -0.71
RRP8-201ENST00000254605 SMARCA4P51532 1647 aa10.62□□□□□ -0.71
RRP8-201ENST00000254605 ATP2B1P20020 1258 aa10.62□□□□□ -0.71
RRP8-201ENST00000254605 GOLGA6L3A6NEY3 463 aa10.62□□□□□ -0.71
RRP8-201ENST00000254605 CSPP1Q1MSJ5 1256 aa10.62□□□□□ -0.71
RRP8-201ENST00000254605 RIC3Q7Z5B4 369 aa10.62□□□□□ -0.71
RRP8-201ENST00000254605 FHOD3Q2V2M9 1422 aa10.62□□□□□ -0.71
RRP8-201ENST00000254605 RRP12Q5JTH9 1297 aaKnown RBP10.61□□□□□ -0.71
RRP8-201ENST00000254605 PTMSP20962 102 aa10.61□□□□□ -0.71
RRP8-201ENST00000254605 FKBP5Q13451 457 aaPredicted RBP10.61□□□□□ -0.71
RRP8-201ENST00000254605 HSP90AB2PQ58FF8 381 aa10.61□□□□□ -0.71
RRP8-201ENST00000254605 SPINK5Q9NQ38 1064 aaPredicted RBP10.61□□□□□ -0.71
RRP8-201ENST00000254605 LMOD3Q0VAK6 560 aa10.6□□□□□ -0.71
RRP8-201ENST00000254605 EPS15P42566 896 aa10.6□□□□□ -0.71
RRP8-201ENST00000254605 TRDNQ13061 729 aa10.6□□□□□ -0.71
RRP8-201ENST00000254605 TPM1P09493 284 aa10.6□□□□□ -0.71
RRP8-201ENST00000254605 BICDL1Q6ZP65 573 aa10.6□□□□□ -0.71
RRP8-201ENST00000254605 HDAC5Q9UQL6 1122 aa10.6□□□□□ -0.71
RRP8-201ENST00000254605 ATAD2BQ9ULI0 1458 aa10.59□□□□□ -0.71
RRP8-201ENST00000254605 L3MBTL2Q969R5 705 aa10.59□□□□□ -0.71
RRP8-201ENST00000254605 VPS37CA5D8V6 355 aaPredicted RBP10.59□□□□□ -0.71
RRP8-201ENST00000254605 ECM2O94769 699 aaPredicted RBP10.59□□□□□ -0.71
RRP8-201ENST00000254605 GRM1Q13255 1194 aa10.59□□□□□ -0.71
RRP8-201ENST00000254605 DDX54Q8TDD1 881 aaKnown RBP10.59□□□□□ -0.71
RRP8-201ENST00000254605 PANK3Q9H999 370 aa10.59□□□□□ -0.71
RRP8-201ENST00000254605 BICD2Q8TD16 824 aa10.59□□□□□ -0.71
RRP8-201ENST00000254605 RAPGEF4Q8WZA2 1011 aa10.58□□□□□ -0.72
RRP8-201ENST00000254605 G3BP1Q13283 466 aaKnown RBP eCLIP10.58□□□□□ -0.72
RRP8-201ENST00000254605 RBM19Q9Y4C8 960 aaKnown RBP10.58□□□□□ -0.72
RRP8-201ENST00000254605 ZNF219Q9P2Y4 722 aaPredicted RBP10.58□□□□□ -0.72
RRP8-201ENST00000254605 KIF3AQ9Y496 699 aa10.58□□□□□ -0.72
RRP8-201ENST00000254605 WWC2Q6AWC2 1192 aa10.58□□□□□ -0.72
RRP8-201ENST00000254605 COG6Q9Y2V7 657 aa10.58□□□□□ -0.72
RRP8-201ENST00000254605 FAM161AQ3B820 660 aa10.57□□□□□ -0.72
RRP8-201ENST00000254605 ESCO1Q5FWF5 840 aa10.57□□□□□ -0.72
RRP8-201ENST00000254605 PLCD3Q8N3E9 789 aa10.57□□□□□ -0.72
RRP8-201ENST00000254605 DNAJC2Q99543 621 aaKnown RBP10.57□□□□□ -0.72
RRP8-201ENST00000254605 RAB3GAP2Q9H2M9 1393 aa10.57□□□□□ -0.72
RRP8-201ENST00000254605 CCDC97Q96F63 343 aaPredicted RBP10.57□□□□□ -0.72
RRP8-201ENST00000254605 TSPYL4Q9UJ04 414 aa10.57□□□□□ -0.72
RRP8-201ENST00000254605 PIBF1Q8WXW3 757 aa10.57□□□□□ -0.72
RRP8-201ENST00000254605 CCDC47Q96A33 483 aaKnown RBP10.56□□□□□ -0.72
RRP8-201ENST00000254605 HOMER1Q86YM7 354 aa10.56□□□□□ -0.72
RRP8-201ENST00000254605 CADPSQ9ULU8 1353 aa10.56□□□□□ -0.72
RRP8-201ENST00000254605 PDILTQ8N807 584 aa10.56□□□□□ -0.72
RRP8-201ENST00000254605 CHMP4AQ9BY43 222 aa10.56□□□□□ -0.72
RRP8-201ENST00000254605 ZHX3Q9H4I2 956 aa10.56□□□□□ -0.72
RRP8-201ENST00000254605 XPCQ01831 940 aaPredicted RBP10.55□□□□□ -0.72
RRP8-201ENST00000254605 RALBP1Q15311 655 aa10.55□□□□□ -0.72
RRP8-201ENST00000254605 DDX49Q9Y6V7 483 aaKnown RBP10.55□□□□□ -0.72
RRP8-201ENST00000254605 CPLX2Q6PUV4 134 aaKnown RBP10.55□□□□□ -0.72
RRP8-201ENST00000254605 ST20-MTHFSA0A0A6YYL1 179 aa10.55□□□□□ -0.72
RRP8-201ENST00000254605 BRPF1P55201 1214 aaPredicted RBP10.55□□□□□ -0.72
RRP8-201ENST00000254605 RIPK4P57078 832 aa10.54□□□□□ -0.72
RRP8-201ENST00000254605 WWC3Q9ULE0 1092 aa10.54□□□□□ -0.72
RRP8-201ENST00000254605 SPDYE4A6NLX3 237 aa10.54□□□□□ -0.72
RRP8-201ENST00000254605 FMN1Q68DA7 1419 aa10.54□□□□□ -0.72
RRP8-201ENST00000254605 VGFO15240 615 aaPredicted RBP10.54□□□□□ -0.72
RRP8-201ENST00000254605 IPO7O95373 1038 aaKnown RBP10.54□□□□□ -0.72
RRP8-201ENST00000254605 CCDC70Q6NSX1 233 aa10.54□□□□□ -0.72
RRP8-201ENST00000254605 ZSCAN29Q8IWY8 852 aaPredicted RBP10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 87.9 ms