RNA–Protein interactions for RNA: ENST00000250448.2

FOXA1-201, Transcript of forkhead box A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXA1, Length 2,862 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-201ENST00000250448 CAMSAP1Q5T5Y3 1602 aa23.04■■□□□ 1.28
FOXA1-201ENST00000250448 POLR3GLQ9BT43 218 aa23.03■■□□□ 1.28
FOXA1-201ENST00000250448 TRPM1Q7Z4N2 1603 aa23■■□□□ 1.27
FOXA1-201ENST00000250448 ST20-MTHFSA0A0A6YYL1 179 aa23■■□□□ 1.27
FOXA1-201ENST00000250448 FBXO31Q5XUX0 539 aaPredicted RBP22.99■■□□□ 1.27
FOXA1-201ENST00000250448 B4GALNT3Q6L9W6 998 aa22.98■■□□□ 1.27
FOXA1-201ENST00000250448 DNAJC5Q9H3Z4 198 aa22.98■■□□□ 1.27
FOXA1-201ENST00000250448 MROH2AA6NES4 1674 aa22.98■■□□□ 1.27
FOXA1-201ENST00000250448 SENP3Q9H4L4 574 aaPredicted RBP22.97■■□□□ 1.27
FOXA1-201ENST00000250448 ARHGEF40Q8TER5 1519 aa22.97■■□□□ 1.27
FOXA1-201ENST00000250448 KIF1BO60333 1816 aa22.96■■□□□ 1.27
FOXA1-201ENST00000250448 ARID4BQ4LE39 1312 aaPredicted RBP22.96■■□□□ 1.27
FOXA1-201ENST00000250448 NUTM2DQ5VT03 806 aaPredicted RBP22.95■■□□□ 1.27
FOXA1-201ENST00000250448 ADGRF5Q8IZF2 1346 aa22.94■■□□□ 1.26
FOXA1-201ENST00000250448 SYNMO15061 1565 aa22.93■■□□□ 1.26
FOXA1-201ENST00000250448 NOS1P29475 1434 aa22.93■■□□□ 1.26
FOXA1-201ENST00000250448 SMG6Q86US8 1419 aaKnown RBP22.93■■□□□ 1.26
FOXA1-201ENST00000250448 MADDQ8WXG6 1647 aa22.92■■□□□ 1.26
FOXA1-201ENST00000250448 IDI1Q13907 227 aa22.92■■□□□ 1.26
FOXA1-201ENST00000250448 ZC3H13Q5T200 1668 aaKnown RBP22.91■■□□□ 1.26
FOXA1-201ENST00000250448 REREQ9P2R6 1566 aa22.91■■□□□ 1.26
FOXA1-201ENST00000250448 AGLP35573 1532 aa22.91■■□□□ 1.26
FOXA1-201ENST00000250448 ARHGAP31Q2M1Z3 1444 aa22.89■■□□□ 1.26
FOXA1-201ENST00000250448 CLTCQ00610 1675 aaKnown RBP22.89■■□□□ 1.25
FOXA1-201ENST00000250448 CFAP70Q5T0N1 1121 aa22.89■■□□□ 1.25
FOXA1-201ENST00000250448 ADGRB3O60242 1522 aa22.88■■□□□ 1.25
FOXA1-201ENST00000250448 GPRASP1Q5JY77 1395 aa22.88■■□□□ 1.25
FOXA1-201ENST00000250448 CNGB1Q14028 1251 aaPredicted RBP22.87■■□□□ 1.25
FOXA1-201ENST00000250448 PREX1Q8TCU6 1659 aa22.85■■□□□ 1.25
FOXA1-201ENST00000250448 ESF1Q9H501 851 aaKnown RBP22.84■■□□□ 1.25
FOXA1-201ENST00000250448 NUDCQ9Y266 331 aa22.84■■□□□ 1.25
FOXA1-201ENST00000250448 PIK3C2BO00750 1634 aa22.82■■□□□ 1.24
FOXA1-201ENST00000250448 IFT172Q9UG01 1749 aa22.81■■□□□ 1.24
FOXA1-201ENST00000250448 RNF123Q5XPI4 1314 aa22.81■■□□□ 1.24
FOXA1-201ENST00000250448 PLPPR3Q6T4P5 718 aa22.81■■□□□ 1.24
FOXA1-201ENST00000250448 NEURL4Q96JN8 1562 aa22.8■■□□□ 1.24
FOXA1-201ENST00000250448 ERVK-7P63135 1459 aa22.8■■□□□ 1.24
FOXA1-201ENST00000250448 SLC52A1Q9NWF4 448 aa22.79■■□□□ 1.24
FOXA1-201ENST00000250448 MYOM2P54296 1465 aa22.79■■□□□ 1.24
FOXA1-201ENST00000250448 MYO5BQ9ULV0 1848 aa22.79■■□□□ 1.24
FOXA1-201ENST00000250448 STAC3Q96MF2 364 aa22.79■■□□□ 1.24
FOXA1-201ENST00000250448 TESK2Q96S53 571 aa22.79■■□□□ 1.24
FOXA1-201ENST00000250448 PPP6R1Q9UPN7 881 aa22.78■■□□□ 1.24
FOXA1-201ENST00000250448 PPLO60437 1756 aa22.77■■□□□ 1.24
FOXA1-201ENST00000250448 STAG3Q9UJ98 1225 aa22.77■■□□□ 1.24
FOXA1-201ENST00000250448 TMEM132EQ6IEE7 984 aa22.76■■□□□ 1.23
FOXA1-201ENST00000250448 ZMYM3Q14202 1370 aa22.76■■□□□ 1.23
FOXA1-201ENST00000250448 DISP3Q9P2K9 1392 aa22.76■■□□□ 1.23
FOXA1-201ENST00000250448 LAMC1P11047 1609 aa22.76■■□□□ 1.23
FOXA1-201ENST00000250448 CEBPAP49715 358 aaPredicted RBP22.73■■□□□ 1.23
FOXA1-201ENST00000250448 NOP58Q9Y2X3 529 aaKnown RBP22.73■■□□□ 1.23
FOXA1-201ENST00000250448 NRXN1Q9ULB1 1477 aa22.72■■□□□ 1.23
FOXA1-201ENST00000250448 CCDC136Q96JN2 1154 aa22.72■■□□□ 1.23
FOXA1-201ENST00000250448 NEXMIFQ5QGS0 1516 aa22.72■■□□□ 1.23
FOXA1-201ENST00000250448 RPGRIP1LQ68CZ1 1315 aa22.72■■□□□ 1.23
FOXA1-201ENST00000250448 SCAF11Q99590 1463 aaKnown RBP22.71■■□□□ 1.23
FOXA1-201ENST00000250448 IQGAP1P46940 1657 aa22.71■■□□□ 1.23
FOXA1-201ENST00000250448 TMEM131LA2VDJ0 1609 aa22.71■■□□□ 1.23
FOXA1-201ENST00000250448 PIK3C2GO75747 1445 aa22.71■■□□□ 1.23
FOXA1-201ENST00000250448 PNISRQ8TF01 805 aaKnown RBP22.71■■□□□ 1.23
FOXA1-201ENST00000250448 TRAK1Q9UPV9 953 aa22.7■■□□□ 1.22
FOXA1-201ENST00000250448 VGFO15240 615 aaPredicted RBP22.69■■□□□ 1.22
FOXA1-201ENST00000250448 C14orf93Q9H972 538 aaKnown RBP22.68■■□□□ 1.22
FOXA1-201ENST00000250448 KIAA1210Q9ULL0 1709 aa22.67■■□□□ 1.22
FOXA1-201ENST00000250448 SPATA31D1Q6ZQQ2 1576 aa22.67■■□□□ 1.22
FOXA1-201ENST00000250448 TMC1Q8TDI8 760 aa22.67■■□□□ 1.22
FOXA1-201ENST00000250448 TMF1P82094 1093 aa22.67■■□□□ 1.22
FOXA1-201ENST00000250448 EIF5BO60841 1220 aaKnown RBP22.66■■□□□ 1.22
FOXA1-201ENST00000250448 LRPPRCP42704 1394 aaKnown RBP22.65■■□□□ 1.22
FOXA1-201ENST00000250448 DAXXQ9UER7 740 aaPredicted RBP22.64■■□□□ 1.21
FOXA1-201ENST00000250448 PAK3O75914 559 aaPredicted RBP22.63■■□□□ 1.21
FOXA1-201ENST00000250448 BRD4O60885 1362 aaPredicted RBP22.62■■□□□ 1.21
FOXA1-201ENST00000250448 SENP3-EIF4A1A0A087X0R7 540 aa22.62■■□□□ 1.21
FOXA1-201ENST00000250448 STK26Q9P289 416 aa22.62■■□□□ 1.21
FOXA1-201ENST00000250448 A2ML1A8K2U0 1454 aa22.61■■□□□ 1.21
FOXA1-201ENST00000250448 DEKP35659 375 aaKnown RBP22.61■■□□□ 1.21
FOXA1-201ENST00000250448 KTN1Q86UP2 1357 aaKnown RBP22.61■■□□□ 1.21
FOXA1-201ENST00000250448 EIF3AQ14152 1382 aaKnown RBP22.61■■□□□ 1.21
FOXA1-201ENST00000250448 TNRQ92752 1358 aa22.6■■□□□ 1.21
FOXA1-201ENST00000250448 MYBBP1AQ9BQG0 1328 aaKnown RBP22.6■■□□□ 1.21
FOXA1-201ENST00000250448 ANP32AP39687 249 aaKnown RBP22.6■■□□□ 1.21
FOXA1-201ENST00000250448 ADGRB1O14514 1584 aa22.6■■□□□ 1.21
FOXA1-201ENST00000250448 SAFB2Q14151 953 aaKnown RBP eCLIP22.59■■□□□ 1.21
FOXA1-201ENST00000250448 ANO8Q9HCE9 1232 aaPredicted RBP22.58■■□□□ 1.21
FOXA1-201ENST00000250448 RALBP1Q15311 655 aa22.57■■□□□ 1.2
FOXA1-201ENST00000250448 IPO9Q96P70 1041 aaKnown RBP22.56■■□□□ 1.2
FOXA1-201ENST00000250448 PANK3Q9H999 370 aa22.56■■□□□ 1.2
FOXA1-201ENST00000250448 RIMS2Q9UQ26 1411 aa22.56■■□□□ 1.2
FOXA1-201ENST00000250448 SETBP1Q9Y6X0 1596 aa22.56■■□□□ 1.2
FOXA1-201ENST00000250448 CENPJQ9HC77 1338 aaPredicted RBP22.55■■□□□ 1.2
FOXA1-201ENST00000250448 ZFYVE9O95405 1425 aa22.54■■□□□ 1.2
FOXA1-201ENST00000250448 NBR1Q14596 966 aa22.54■■□□□ 1.2
FOXA1-201ENST00000250448 FER1L4A9Z1Z3 1794 aa22.53■■□□□ 1.2
FOXA1-201ENST00000250448 RRP1P56182 461 aaKnown RBP22.53■■□□□ 1.2
FOXA1-201ENST00000250448 ASXL1Q8IXJ9 1541 aa22.52■■□□□ 1.2
FOXA1-201ENST00000250448 C3P01024 1663 aa22.51■■□□□ 1.19
FOXA1-201ENST00000250448 PER1O15534 1290 aaPredicted RBP22.49■■□□□ 1.19
FOXA1-201ENST00000250448 CC2D1BQ5T0F9 858 aaKnown RBP22.49■■□□□ 1.19
FOXA1-201ENST00000250448 PLEKHG5O94827 1062 aa22.48■■□□□ 1.19
FOXA1-201ENST00000250448 ZBTB47Q9UFB7 747 aaPredicted RBP22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms