RNA–Protein interactions for RNA: ENST00000246117.8

NCLN-201, Transcript of nicalin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCLN, Length 4,005 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLN-201ENST00000246117 SCAPERQ9BY12 1400 aa17.34■□□□□ 0.37
NCLN-201ENST00000246117 RIPK4P57078 832 aa17.34■□□□□ 0.37
NCLN-201ENST00000246117 GSE1Q14687 1217 aa17.34■□□□□ 0.37
NCLN-201ENST00000246117 ANKRD45Q5TZF3 282 aa17.33■□□□□ 0.37
NCLN-201ENST00000246117 DISP3Q9P2K9 1392 aa17.33■□□□□ 0.37
NCLN-201ENST00000246117 NECTIN2Q92692 538 aa17.32■□□□□ 0.36
NCLN-201ENST00000246117 TERF2IPQ9NYB0 399 aa17.32■□□□□ 0.36
NCLN-201ENST00000246117 RAPGEF3O95398 923 aa17.32■□□□□ 0.36
NCLN-201ENST00000246117 PLCB2Q00722 1185 aa17.32■□□□□ 0.36
NCLN-201ENST00000246117 ZKSCAN2Q63HK3 967 aa17.31■□□□□ 0.36
NCLN-201ENST00000246117 FOXD4L6Q3SYB3 417 aaPredicted RBP17.31■□□□□ 0.36
NCLN-201ENST00000246117 FOXD4L3Q6VB84 417 aaPredicted RBP17.31■□□□□ 0.36
NCLN-201ENST00000246117 SYNJ2O15056 1496 aa17.31■□□□□ 0.36
NCLN-201ENST00000246117 ERBINQ96RT1 1412 aa17.31■□□□□ 0.36
NCLN-201ENST00000246117 IPO8O15397 1037 aaKnown RBP17.31■□□□□ 0.36
NCLN-201ENST00000246117 C1orf115Q9H7X2 142 aa17.3■□□□□ 0.36
NCLN-201ENST00000246117 GOLGA6L22H0YM25 854 aa17.29■□□□□ 0.36
NCLN-201ENST00000246117 RUNDC1Q96C34 613 aa17.29■□□□□ 0.36
NCLN-201ENST00000246117 IFT140Q96RY7 1462 aa17.29■□□□□ 0.36
NCLN-201ENST00000246117 FBLN1P23142 703 aa17.29■□□□□ 0.36
NCLN-201ENST00000246117 UGGT2Q9NYU1 1516 aa17.28■□□□□ 0.36
NCLN-201ENST00000246117 DZIP1LQ8IYY4 767 aaKnown RBP17.28■□□□□ 0.36
NCLN-201ENST00000246117 CUL7Q14999 1698 aa17.28■□□□□ 0.36
NCLN-201ENST00000246117 EVC2Q86UK5 1308 aa17.28■□□□□ 0.36
NCLN-201ENST00000246117 EXOSC9Q06265 439 aaKnown RBP17.28■□□□□ 0.36
NCLN-201ENST00000246117 GPATCH8Q9UKJ3 1502 aaKnown RBP17.28■□□□□ 0.36
NCLN-201ENST00000246117 ADGRF5Q8IZF2 1346 aa17.27■□□□□ 0.36
NCLN-201ENST00000246117 PLEKHH2Q8IVE3 1493 aa17.26■□□□□ 0.35
NCLN-201ENST00000246117 VGFO15240 615 aaPredicted RBP17.26■□□□□ 0.35
NCLN-201ENST00000246117 ARID3AQ99856 593 aa17.26■□□□□ 0.35
NCLN-201ENST00000246117 MAGI1Q96QZ7 1491 aaPredicted RBP17.26■□□□□ 0.35
NCLN-201ENST00000246117 NUP153P49790 1475 aaKnown RBP17.26■□□□□ 0.35
NCLN-201ENST00000246117 GRIN2AQ12879 1464 aa17.26■□□□□ 0.35
NCLN-201ENST00000246117 THUMPD2Q9BTF0 503 aaKnown RBP17.25■□□□□ 0.35
NCLN-201ENST00000246117 PDZRN3Q9UPQ7 1066 aa17.25■□□□□ 0.35
NCLN-201ENST00000246117 ZNF428Q96B54 188 aa17.24■□□□□ 0.35
NCLN-201ENST00000246117 OS9Q13438 667 aaPredicted RBP17.24■□□□□ 0.35
NCLN-201ENST00000246117 MAGI3Q5TCQ9 1506 aa17.23■□□□□ 0.35
NCLN-201ENST00000246117 DIAPH1O60610 1272 aaKnown RBP17.23■□□□□ 0.35
NCLN-201ENST00000246117 DUSP27Q5VZP5 1158 aa17.23■□□□□ 0.35
NCLN-201ENST00000246117 RTF1Q92541 710 aaKnown RBP17.23■□□□□ 0.35
NCLN-201ENST00000246117 TNNQ9UQP3 1299 aa17.23■□□□□ 0.35
NCLN-201ENST00000246117 SLFN5Q08AF3 891 aa17.22■□□□□ 0.35
NCLN-201ENST00000246117 PNNQ9H307 717 aaKnown RBP17.22■□□□□ 0.35
NCLN-201ENST00000246117 WWC1Q8IX03 1113 aa17.22■□□□□ 0.35
NCLN-201ENST00000246117 DHX29Q7Z478 1369 aaKnown RBP17.22■□□□□ 0.35
NCLN-201ENST00000246117 PRAM1Q96QH2 718 aa17.21■□□□□ 0.35
NCLN-201ENST00000246117 NUTM2GQ5VZR2 741 aa17.21■□□□□ 0.35
NCLN-201ENST00000246117 LAMC3Q9Y6N6 1575 aa17.21■□□□□ 0.35
NCLN-201ENST00000246117 CASC1Q6TDU7 716 aa17.2■□□□□ 0.34
NCLN-201ENST00000246117 SPINK5Q9NQ38 1064 aaPredicted RBP17.2■□□□□ 0.34
NCLN-201ENST00000246117 PTMAP06454 111 aaKnown RBP17.2■□□□□ 0.34
NCLN-201ENST00000246117 ANO8Q9HCE9 1232 aaPredicted RBP17.2■□□□□ 0.34
NCLN-201ENST00000246117 USP35Q9P2H5 1018 aa17.19■□□□□ 0.34
NCLN-201ENST00000246117 TESK2Q96S53 571 aa17.18■□□□□ 0.34
NCLN-201ENST00000246117 PRKAR2BP31323 418 aa17.18■□□□□ 0.34
NCLN-201ENST00000246117 IGHDP01880 384 aa17.18■□□□□ 0.34
NCLN-201ENST00000246117 KDM6BO15054 1643 aa17.18■□□□□ 0.34
NCLN-201ENST00000246117 TRIM6-TRIM34B2RNG4 842 aa17.18■□□□□ 0.34
NCLN-201ENST00000246117 CABP1Q9NZU7 370 aa17.18■□□□□ 0.34
NCLN-201ENST00000246117 GOLGA6L3A6NEY3 463 aa17.17■□□□□ 0.34
NCLN-201ENST00000246117 NGDNQ8NEJ9 315 aaKnown RBP17.17■□□□□ 0.34
NCLN-201ENST00000246117 NOB1Q9ULX3 412 aaKnown RBP17.16■□□□□ 0.34
NCLN-201ENST00000246117 C22orf23Q9BZE7 217 aa17.16■□□□□ 0.34
NCLN-201ENST00000246117 PER1O15534 1290 aaPredicted RBP17.15■□□□□ 0.34
NCLN-201ENST00000246117 ATP10BO94823 1461 aa17.15■□□□□ 0.34
NCLN-201ENST00000246117 CCDC141Q6ZP82 1450 aa17.15■□□□□ 0.34
NCLN-201ENST00000246117 CFAP43Q8NDM7 1665 aa17.15■□□□□ 0.34
NCLN-201ENST00000246117 KCNJ4P48050 445 aa17.14■□□□□ 0.33
NCLN-201ENST00000246117 DNTTIP2Q5QJE6 756 aaKnown RBP17.14■□□□□ 0.33
NCLN-201ENST00000246117 DMRT2Q9Y5R5 561 aa17.14■□□□□ 0.33
NCLN-201ENST00000246117 DDX19BQ9UMR2 479 aa17.13■□□□□ 0.33
NCLN-201ENST00000246117 TRHP20396 242 aaPredicted RBP17.13■□□□□ 0.33
NCLN-201ENST00000246117 AMPHP49418 695 aa17.13■□□□□ 0.33
NCLN-201ENST00000246117 COG3Q96JB2 828 aa17.13■□□□□ 0.33
NCLN-201ENST00000246117 PZPP20742 1482 aa17.12■□□□□ 0.33
NCLN-201ENST00000246117 AMER1Q5JTC6 1135 aaPredicted RBP17.12■□□□□ 0.33
NCLN-201ENST00000246117 TXNDC2Q86VQ3 553 aa17.12■□□□□ 0.33
NCLN-201ENST00000246117 NSD3Q9BZ95 1437 aa17.12■□□□□ 0.33
NCLN-201ENST00000246117 L1TD1Q5T7N2 865 aaKnown RBP17.12■□□□□ 0.33
NCLN-201ENST00000246117 NAP1L2Q9ULW6 460 aaPredicted RBP17.12■□□□□ 0.33
NCLN-201ENST00000246117 DCTN1Q14203 1278 aa17.12■□□□□ 0.33
NCLN-201ENST00000246117 RRS1Q15050 365 aaKnown RBP17.12■□□□□ 0.33
NCLN-201ENST00000246117 WAPLQ7Z5K2 1190 aa17.12■□□□□ 0.33
NCLN-201ENST00000246117 RILPL2Q969X0 211 aa17.11■□□□□ 0.33
NCLN-201ENST00000246117 OSCARQ8IYS5 282 aa17.11■□□□□ 0.33
NCLN-201ENST00000246117 PLEKHH1Q9ULM0 1364 aa17.11■□□□□ 0.33
NCLN-201ENST00000246117 FAM69CQ0P6D2 419 aa17.1■□□□□ 0.33
NCLN-201ENST00000246117 CCDC9Q9Y3X0 531 aaKnown RBP17.1■□□□□ 0.33
NCLN-201ENST00000246117 CHMP4BQ9H444 224 aaKnown RBP17.1■□□□□ 0.33
NCLN-201ENST00000246117 EIF2S2P20042 333 aaKnown RBP17.09■□□□□ 0.33
NCLN-201ENST00000246117 PDE3AQ14432 1141 aa17.09■□□□□ 0.33
NCLN-201ENST00000246117 GBP4Q96PP9 640 aa17.09■□□□□ 0.33
NCLN-201ENST00000246117 RARSP54136 660 aaKnown RBP17.08■□□□□ 0.33
NCLN-201ENST00000246117 STK31Q9BXU1 1019 aa17.08■□□□□ 0.32
NCLN-201ENST00000246117 CTTNBP2Q8WZ74 1663 aa17.08■□□□□ 0.32
NCLN-201ENST00000246117 FBXO31Q5XUX0 539 aaPredicted RBP17.07■□□□□ 0.32
NCLN-201ENST00000246117 SSH1Q8WYL5 1049 aa17.07■□□□□ 0.32
NCLN-201ENST00000246117 TEX14Q8IWB6 1497 aa17.07■□□□□ 0.32
NCLN-201ENST00000246117 CARD14Q9BXL6 1004 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms