RNA–Protein interactions for RNA: ENST00000245544.8

NUP85-201, Transcript of nucleoporin 85, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP85, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-201ENST00000245544 CCER2I3L3R5 266 aa18.62■□□□□ 0.57
NUP85-201ENST00000245544 TESK2Q96S53 571 aa18.62■□□□□ 0.57
NUP85-201ENST00000245544 CLTCQ00610 1675 aaKnown RBP18.61■□□□□ 0.57
NUP85-201ENST00000245544 NRXN1Q9ULB1 1477 aa18.6■□□□□ 0.57
NUP85-201ENST00000245544 IQGAP1P46940 1657 aa18.6■□□□□ 0.57
NUP85-201ENST00000245544 PPLO60437 1756 aa18.6■□□□□ 0.57
NUP85-201ENST00000245544 TRHP20396 242 aaPredicted RBP18.59■□□□□ 0.57
NUP85-201ENST00000245544 DISP3Q9P2K9 1392 aa18.58■□□□□ 0.57
NUP85-201ENST00000245544 NUTM2DQ5VT03 806 aaPredicted RBP18.58■□□□□ 0.57
NUP85-201ENST00000245544 KIAA1210Q9ULL0 1709 aa18.58■□□□□ 0.57
NUP85-201ENST00000245544 PPP6R1Q9UPN7 881 aa18.57■□□□□ 0.56
NUP85-201ENST00000245544 PRKRIP1Q9H875 184 aaPredicted RBP18.56■□□□□ 0.56
NUP85-201ENST00000245544 SLC52A1Q9NWF4 448 aa18.56■□□□□ 0.56
NUP85-201ENST00000245544 ERVK-7P63135 1459 aa18.56■□□□□ 0.56
NUP85-201ENST00000245544 SCAF11Q99590 1463 aaKnown RBP18.56■□□□□ 0.56
NUP85-201ENST00000245544 MYO5BQ9ULV0 1848 aa18.56■□□□□ 0.56
NUP85-201ENST00000245544 RPGRIP1LQ68CZ1 1315 aa18.54■□□□□ 0.56
NUP85-201ENST00000245544 PIK3C2GO75747 1445 aa18.54■□□□□ 0.56
NUP85-201ENST00000245544 NEXMIFQ5QGS0 1516 aa18.54■□□□□ 0.56
NUP85-201ENST00000245544 CNGB1Q14028 1251 aaPredicted RBP18.53■□□□□ 0.56
NUP85-201ENST00000245544 CCDC184Q52MB2 194 aa18.53■□□□□ 0.56
NUP85-201ENST00000245544 TMEM131LA2VDJ0 1609 aa18.52■□□□□ 0.55
NUP85-201ENST00000245544 SENP3Q9H4L4 574 aaPredicted RBP18.5■□□□□ 0.55
NUP85-201ENST00000245544 SCAF1Q9H7N4 1312 aaKnown RBP18.5■□□□□ 0.55
NUP85-201ENST00000245544 TMF1P82094 1093 aa18.5■□□□□ 0.55
NUP85-201ENST00000245544 C14orf93Q9H972 538 aaKnown RBP18.5■□□□□ 0.55
NUP85-201ENST00000245544 TMEM132EQ6IEE7 984 aa18.49■□□□□ 0.55
NUP85-201ENST00000245544 SPATA31D1Q6ZQQ2 1576 aa18.48■□□□□ 0.55
NUP85-201ENST00000245544 ZMYM3Q14202 1370 aa18.48■□□□□ 0.55
NUP85-201ENST00000245544 VGFO15240 615 aaPredicted RBP18.47■□□□□ 0.55
NUP85-201ENST00000245544 DNAJC5Q9H3Z4 198 aa18.47■□□□□ 0.55
NUP85-201ENST00000245544 ADGRB1O14514 1584 aa18.46■□□□□ 0.55
NUP85-201ENST00000245544 ESF1Q9H501 851 aaKnown RBP18.46■□□□□ 0.55
NUP85-201ENST00000245544 SETBP1Q9Y6X0 1596 aa18.46■□□□□ 0.55
NUP85-201ENST00000245544 EIF3AQ14152 1382 aaKnown RBP18.45■□□□□ 0.54
NUP85-201ENST00000245544 TRAK1Q9UPV9 953 aa18.44■□□□□ 0.54
NUP85-201ENST00000245544 STAG3Q9UJ98 1225 aa18.43■□□□□ 0.54
NUP85-201ENST00000245544 ZFYVE9O95405 1425 aa18.42■□□□□ 0.54
NUP85-201ENST00000245544 PER1O15534 1290 aaPredicted RBP18.42■□□□□ 0.54
NUP85-201ENST00000245544 PANK3Q9H999 370 aa18.41■□□□□ 0.54
NUP85-201ENST00000245544 A2ML1A8K2U0 1454 aa18.41■□□□□ 0.54
NUP85-201ENST00000245544 MRS2Q9HD23 443 aa18.4■□□□□ 0.54
NUP85-201ENST00000245544 MYO3AQ8NEV4 1616 aa18.39■□□□□ 0.53
NUP85-201ENST00000245544 GTF3C3Q9Y5Q9 886 aa18.39■□□□□ 0.53
NUP85-201ENST00000245544 CENPJQ9HC77 1338 aaPredicted RBP18.38■□□□□ 0.53
NUP85-201ENST00000245544 ASXL1Q8IXJ9 1541 aa18.38■□□□□ 0.53
NUP85-201ENST00000245544 CEBPAP49715 358 aaPredicted RBP18.37■□□□□ 0.53
NUP85-201ENST00000245544 TNRQ92752 1358 aa18.35■□□□□ 0.53
NUP85-201ENST00000245544 FAM9BQ8IZU0 186 aa18.35■□□□□ 0.53
NUP85-201ENST00000245544 MYOM1P52179 1685 aa18.35■□□□□ 0.53
NUP85-201ENST00000245544 CDCA8Q53HL2 280 aa18.34■□□□□ 0.53
NUP85-201ENST00000245544 QRICH2Q9H0J4 1663 aa18.34■□□□□ 0.53
NUP85-201ENST00000245544 RIMS2Q9UQ26 1411 aa18.34■□□□□ 0.53
NUP85-201ENST00000245544 KDM5AP29375 1690 aaKnown RBP18.34■□□□□ 0.53
NUP85-201ENST00000245544 ARHGEF28Q8N1W1 1705 aaKnown RBP18.33■□□□□ 0.53
NUP85-201ENST00000245544 STK26Q9P289 416 aa18.33■□□□□ 0.52
NUP85-201ENST00000245544 SBNO2Q9Y2G9 1366 aa18.33■□□□□ 0.52
NUP85-201ENST00000245544 CC2D1BQ5T0F9 858 aaKnown RBP18.32■□□□□ 0.52
NUP85-201ENST00000245544 PLPPR3Q6T4P5 718 aa18.32■□□□□ 0.52
NUP85-201ENST00000245544 ALKQ9UM73 1620 aa18.32■□□□□ 0.52
NUP85-201ENST00000245544 RALBP1Q15311 655 aa18.31■□□□□ 0.52
NUP85-201ENST00000245544 KTN1Q86UP2 1357 aaKnown RBP18.3■□□□□ 0.52
NUP85-201ENST00000245544 PARD3Q8TEW0 1356 aa18.3■□□□□ 0.52
NUP85-201ENST00000245544 HNRNPUQ00839 825 aaKnown RBP eCLIP18.3■□□□□ 0.52
NUP85-201ENST00000245544 SAFB2Q14151 953 aaKnown RBP eCLIP18.29■□□□□ 0.52
NUP85-201ENST00000245544 MYBBP1AQ9BQG0 1328 aaKnown RBP18.29■□□□□ 0.52
NUP85-201ENST00000245544 FER1L4A9Z1Z3 1794 aa18.29■□□□□ 0.52
NUP85-201ENST00000245544 C3P01024 1663 aa18.28■□□□□ 0.52
NUP85-201ENST00000245544 PTPRMP28827 1452 aa18.28■□□□□ 0.52
NUP85-201ENST00000245544 SLC24A1O60721 1099 aa18.28■□□□□ 0.52
NUP85-201ENST00000245544 YTHDC2Q9H6S0 1430 aaKnown RBP18.27■□□□□ 0.52
NUP85-201ENST00000245544 UBR1Q8IWV7 1749 aa18.27■□□□□ 0.52
NUP85-201ENST00000245544 AMER1Q5JTC6 1135 aaPredicted RBP18.25■□□□□ 0.51
NUP85-201ENST00000245544 KNSTRNQ9Y448 316 aa18.25■□□□□ 0.51
NUP85-201ENST00000245544 NRXN3Q9Y4C0 1643 aa18.25■□□□□ 0.51
NUP85-201ENST00000245544 SETD1AO15047 1707 aaKnown RBP18.25■□□□□ 0.51
NUP85-201ENST00000245544 TMC1Q8TDI8 760 aa18.25■□□□□ 0.51
NUP85-201ENST00000245544 TULP4Q9NRJ4 1543 aa18.24■□□□□ 0.51
NUP85-201ENST00000245544 PNISRQ8TF01 805 aaKnown RBP18.24■□□□□ 0.51
NUP85-201ENST00000245544 PRAM1Q96QH2 718 aa18.23■□□□□ 0.51
NUP85-201ENST00000245544 CARD14Q9BXL6 1004 aa18.23■□□□□ 0.51
NUP85-201ENST00000245544 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.23■□□□□ 0.51
NUP85-201ENST00000245544 BRD4O60885 1362 aaPredicted RBP18.23■□□□□ 0.51
NUP85-201ENST00000245544 TMEM2Q9UHN6 1383 aa18.23■□□□□ 0.51
NUP85-201ENST00000245544 SLC12A5Q9H2X9 1139 aa18.22■□□□□ 0.51
NUP85-201ENST00000245544 NLRP13Q86W25 1043 aa18.21■□□□□ 0.51
NUP85-201ENST00000245544 CABP2Q9NPB3 220 aa18.21■□□□□ 0.51
NUP85-201ENST00000245544 NLRP1Q9C000 1473 aa18.2■□□□□ 0.5
NUP85-201ENST00000245544 METP08581 1390 aa18.2■□□□□ 0.5
NUP85-201ENST00000245544 EVC2Q86UK5 1308 aa18.2■□□□□ 0.5
NUP85-201ENST00000245544 MINK1Q8N4C8 1332 aaPredicted RBP18.2■□□□□ 0.5
NUP85-201ENST00000245544 POGKQ9P215 609 aa18.2■□□□□ 0.5
NUP85-201ENST00000245544 LTKP29376 864 aa18.19■□□□□ 0.5
NUP85-201ENST00000245544 SENP3-EIF4A1A0A087X0R7 540 aa18.18■□□□□ 0.5
NUP85-201ENST00000245544 WAPLQ7Z5K2 1190 aa18.18■□□□□ 0.5
NUP85-201ENST00000245544 PLEKHH1Q9ULM0 1364 aa18.17■□□□□ 0.5
NUP85-201ENST00000245544 HDGFP51858 240 aaKnown RBP18.17■□□□□ 0.5
NUP85-201ENST00000245544 BCANQ96GW7 911 aa18.17■□□□□ 0.5
NUP85-201ENST00000245544 LRPPRCP42704 1394 aaKnown RBP18.17■□□□□ 0.5
NUP85-201ENST00000245544 RIMS1Q86UR5 1692 aaKnown RBP18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms