RNA–Protein interactions for RNA: ENST00000245479.2

SOX9-201, Transcript of SRY-box 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX9, Length 3,935 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-201ENST00000245479 TSR2Q969E8 191 aaKnown RBP14.7□□□□□ -0.06
SOX9-201ENST00000245479 GOLGA6L3A6NEY3 463 aa14.7□□□□□ -0.06
SOX9-201ENST00000245479 SPINK5Q9NQ38 1064 aaPredicted RBP14.7□□□□□ -0.06
SOX9-201ENST00000245479 CFAP53Q96M91 514 aa14.69□□□□□ -0.06
SOX9-201ENST00000245479 WDR62O43379 1518 aa14.69□□□□□ -0.06
SOX9-201ENST00000245479 UBE2Q2Q8WVN8 375 aa14.69□□□□□ -0.06
SOX9-201ENST00000245479 TNNQ9UQP3 1299 aa14.69□□□□□ -0.06
SOX9-201ENST00000245479 KIF14Q15058 1648 aa14.68□□□□□ -0.06
SOX9-201ENST00000245479 TESK2Q96S53 571 aa14.68□□□□□ -0.06
SOX9-201ENST00000245479 NCLP19338 710 aaKnown RBP14.67□□□□□ -0.06
SOX9-201ENST00000245479 FAM161AQ3B820 660 aa14.67□□□□□ -0.06
SOX9-201ENST00000245479 DMRT2Q9Y5R5 561 aa14.67□□□□□ -0.06
SOX9-201ENST00000245479 MAPK8IP3Q9UPT6 1336 aa14.67□□□□□ -0.06
SOX9-201ENST00000245479 FRAT2O75474 233 aaPredicted RBP14.67□□□□□ -0.06
SOX9-201ENST00000245479 HMOX1P09601 288 aa14.67□□□□□ -0.06
SOX9-201ENST00000245479 BACH2Q9BYV9 841 aa14.67□□□□□ -0.06
SOX9-201ENST00000245479 FOXD4L1Q9NU39 408 aa14.67□□□□□ -0.06
SOX9-201ENST00000245479 ITPRIPQ8IWB1 547 aa14.67□□□□□ -0.06
SOX9-201ENST00000245479 BRD4O60885 1362 aaPredicted RBP14.67□□□□□ -0.06
SOX9-201ENST00000245479 ABCA5Q8WWZ7 1642 aa14.66□□□□□ -0.06
SOX9-201ENST00000245479 GOLGA6L22H0YM25 854 aa14.66□□□□□ -0.06
SOX9-201ENST00000245479 PDE3BQ13370 1112 aa14.66□□□□□ -0.06
SOX9-201ENST00000245479 PER1O15534 1290 aaPredicted RBP14.65□□□□□ -0.06
SOX9-201ENST00000245479 TCP11L2Q8N4U5 519 aa14.65□□□□□ -0.06
SOX9-201ENST00000245479 TEX14Q8IWB6 1497 aa14.65□□□□□ -0.06
SOX9-201ENST00000245479 CENPJQ9HC77 1338 aaPredicted RBP14.65□□□□□ -0.06
SOX9-201ENST00000245479 SMG6Q86US8 1419 aaKnown RBP14.65□□□□□ -0.06
SOX9-201ENST00000245479 ARID3AQ99856 593 aa14.64□□□□□ -0.07
SOX9-201ENST00000245479 ZNF428Q96B54 188 aa14.64□□□□□ -0.07
SOX9-201ENST00000245479 SMC4Q9NTJ3 1288 aa14.64□□□□□ -0.07
SOX9-201ENST00000245479 ERBINQ96RT1 1412 aa14.64□□□□□ -0.07
SOX9-201ENST00000245479 SAMD9Q5K651 1589 aa14.63□□□□□ -0.07
SOX9-201ENST00000245479 MYH16Q9H6N6 1097 aa14.63□□□□□ -0.07
SOX9-201ENST00000245479 ADAMTS12P58397 1594 aa14.63□□□□□ -0.07
SOX9-201ENST00000245479 RAPGEF6Q8TEU7 1601 aa14.63□□□□□ -0.07
SOX9-201ENST00000245479 TCOF1Q13428 1488 aaKnown RBP14.63□□□□□ -0.07
SOX9-201ENST00000245479 THUMPD2Q9BTF0 503 aaKnown RBP14.62□□□□□ -0.07
SOX9-201ENST00000245479 MFAP1P55081 439 aaKnown RBP14.62□□□□□ -0.07
SOX9-201ENST00000245479 KIAA0556O60303 1618 aa14.61□□□□□ -0.07
SOX9-201ENST00000245479 FAM43AQ8N2R8 423 aa14.61□□□□□ -0.07
SOX9-201ENST00000245479 CENPQQ7L2Z9 268 aaPredicted RBP14.61□□□□□ -0.07
SOX9-201ENST00000245479 TARBP1Q13395 1621 aaKnown RBP14.61□□□□□ -0.07
SOX9-201ENST00000245479 MSNP26038 577 aaKnown RBP14.6□□□□□ -0.07
SOX9-201ENST00000245479 FBXO31Q5XUX0 539 aaPredicted RBP14.6□□□□□ -0.07
SOX9-201ENST00000245479 SPATA31E1Q6ZUB1 1445 aa14.6□□□□□ -0.07
SOX9-201ENST00000245479 DNTTIP2Q5QJE6 756 aaKnown RBP14.6□□□□□ -0.07
SOX9-201ENST00000245479 LMOD2Q6P5Q4 547 aa14.6□□□□□ -0.07
SOX9-201ENST00000245479 TRAPPC8Q9Y2L5 1435 aa14.6□□□□□ -0.07
SOX9-201ENST00000245479 HSCBQ8IWL3 235 aa14.59□□□□□ -0.07
SOX9-201ENST00000245479 LRRIQ1Q96JM4 1722 aa14.58□□□□□ -0.07
SOX9-201ENST00000245479 CARD14Q9BXL6 1004 aa14.58□□□□□ -0.08
SOX9-201ENST00000245479 CCDC141Q6ZP82 1450 aa14.58□□□□□ -0.08
SOX9-201ENST00000245479 HSP90AB1P08238 724 aaKnown RBP14.58□□□□□ -0.08
SOX9-201ENST00000245479 SYCP2Q9BX26 1530 aa14.58□□□□□ -0.08
SOX9-201ENST00000245479 C1orf115Q9H7X2 142 aa14.58□□□□□ -0.08
SOX9-201ENST00000245479 EIF4G3O43432 1585 aaKnown RBP14.57□□□□□ -0.08
SOX9-201ENST00000245479 PTMAP06454 111 aaKnown RBP14.57□□□□□ -0.08
SOX9-201ENST00000245479 NECTIN2Q92692 538 aa14.57□□□□□ -0.08
SOX9-201ENST00000245479 DUSP27Q5VZP5 1158 aa14.57□□□□□ -0.08
SOX9-201ENST00000245479 WAPLQ7Z5K2 1190 aa14.57□□□□□ -0.08
SOX9-201ENST00000245479 AMER1Q5JTC6 1135 aaPredicted RBP14.56□□□□□ -0.08
SOX9-201ENST00000245479 NUTM2GQ5VZR2 741 aa14.56□□□□□ -0.08
SOX9-201ENST00000245479 LTV1Q96GA3 475 aaPredicted RBP14.56□□□□□ -0.08
SOX9-201ENST00000245479 PRAM1Q96QH2 718 aa14.56□□□□□ -0.08
SOX9-201ENST00000245479 PLEKHH1Q9ULM0 1364 aa14.56□□□□□ -0.08
SOX9-201ENST00000245479 KDM5BQ9UGL1 1544 aa14.56□□□□□ -0.08
SOX9-201ENST00000245479 CFAP65Q6ZU64 1925 aaKnown RBP14.55□□□□□ -0.08
SOX9-201ENST00000245479 OSCARQ8IYS5 282 aa14.55□□□□□ -0.08
SOX9-201ENST00000245479 IGHDP01880 384 aa14.55□□□□□ -0.08
SOX9-201ENST00000245479 RIPK4P57078 832 aa14.54□□□□□ -0.08
SOX9-201ENST00000245479 E9PSI1 815 aa14.53□□□□□ -0.08
SOX9-201ENST00000245479 EXOSC9Q06265 439 aaKnown RBP14.53□□□□□ -0.08
SOX9-201ENST00000245479 RBM33Q96EV2 1170 aaKnown RBP14.53□□□□□ -0.08
SOX9-201ENST00000245479 CEP170Q5SW79 1584 aa14.53□□□□□ -0.08
SOX9-201ENST00000245479 FAM69CQ0P6D2 419 aa14.53□□□□□ -0.08
SOX9-201ENST00000245479 CABP1Q9NZU7 370 aa14.53□□□□□ -0.08
SOX9-201ENST00000245479 PBRM1Q86U86 1689 aa14.52□□□□□ -0.08
SOX9-201ENST00000245479 WWC1Q8IX03 1113 aa14.52□□□□□ -0.08
SOX9-201ENST00000245479 PRAG1Q86YV5 1406 aa14.52□□□□□ -0.09
SOX9-201ENST00000245479 SLFN5Q08AF3 891 aa14.51□□□□□ -0.09
SOX9-201ENST00000245479 LNPKQ9C0E8 428 aa14.51□□□□□ -0.09
SOX9-201ENST00000245479 TXNDC2Q86VQ3 553 aa14.51□□□□□ -0.09
SOX9-201ENST00000245479 NCKAP5LQ9HCH0 1330 aa14.51□□□□□ -0.09
SOX9-201ENST00000245479 EIF3AQ14152 1382 aaKnown RBP14.51□□□□□ -0.09
SOX9-201ENST00000245479 IDI1Q13907 227 aa14.5□□□□□ -0.09
SOX9-201ENST00000245479 DCTN1Q14203 1278 aa14.5□□□□□ -0.09
SOX9-201ENST00000245479 CGNL1Q0VF96 1302 aa14.5□□□□□ -0.09
SOX9-201ENST00000245479 RRS1Q15050 365 aaKnown RBP14.5□□□□□ -0.09
SOX9-201ENST00000245479 FAM135AQ9P2D6 1515 aa14.5□□□□□ -0.09
SOX9-201ENST00000245479 DNMT1P26358 1616 aaKnown RBP14.49□□□□□ -0.09
SOX9-201ENST00000245479 SLC4A10Q6U841 1118 aa14.49□□□□□ -0.09
SOX9-201ENST00000245479 GBP4Q96PP9 640 aa14.49□□□□□ -0.09
SOX9-201ENST00000245479 VGFO15240 615 aaPredicted RBP14.48□□□□□ -0.09
SOX9-201ENST00000245479 HDGFL2Q7Z4V5 671 aaPredicted RBP14.48□□□□□ -0.09
SOX9-201ENST00000245479 RUNDC1Q96C34 613 aa14.48□□□□□ -0.09
SOX9-201ENST00000245479 SEC24BO95487 1268 aa14.47□□□□□ -0.09
SOX9-201ENST00000245479 ZRANB1Q9UGI0 708 aa14.47□□□□□ -0.09
SOX9-201ENST00000245479 EVC2Q86UK5 1308 aa14.47□□□□□ -0.09
SOX9-201ENST00000245479 RLBP1P12271 317 aa14.47□□□□□ -0.09
SOX9-201ENST00000245479 NSD3Q9BZ95 1437 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms