RNA–Protein interactions for RNA: ENST00000244050.2

SNAI1-201, Transcript of snail family transcriptional repressor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAI1, Length 1,686 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI1-201ENST00000244050 RGL3Q3MIN7 710 aa17.56■□□□□ 0.4
SNAI1-201ENST00000244050 PPP6R1Q9UPN7 881 aa17.56■□□□□ 0.4
SNAI1-201ENST00000244050 CLTCL1P53675 1640 aa17.56■□□□□ 0.4
SNAI1-201ENST00000244050 ILDR2Q71H61 639 aa17.55■□□□□ 0.4
SNAI1-201ENST00000244050 ZNF335Q9H4Z2 1342 aaPredicted RBP17.55■□□□□ 0.4
SNAI1-201ENST00000244050 RALGAPBQ86X10 1494 aa17.54■□□□□ 0.4
SNAI1-201ENST00000244050 ZC3H13Q5T200 1668 aaKnown RBP17.53■□□□□ 0.4
SNAI1-201ENST00000244050 DISP3Q9P2K9 1392 aa17.53■□□□□ 0.4
SNAI1-201ENST00000244050 ABCC3O15438 1527 aa17.53■□□□□ 0.4
SNAI1-201ENST00000244050 USP47Q96K76 1375 aa17.53■□□□□ 0.4
SNAI1-201ENST00000244050 PRKRIP1Q9H875 184 aaPredicted RBP17.52■□□□□ 0.39
SNAI1-201ENST00000244050 WASHC2CQ9Y4E1 1318 aa17.51■□□□□ 0.39
SNAI1-201ENST00000244050 KIF1BO60333 1816 aa17.51■□□□□ 0.39
SNAI1-201ENST00000244050 TRPM1Q7Z4N2 1603 aa17.51■□□□□ 0.39
SNAI1-201ENST00000244050 PRAG1Q86YV5 1406 aa17.5■□□□□ 0.39
SNAI1-201ENST00000244050 A2ML1A8K2U0 1454 aa17.5■□□□□ 0.39
SNAI1-201ENST00000244050 CFAP65Q6ZU64 1925 aaKnown RBP17.49■□□□□ 0.39
SNAI1-201ENST00000244050 FBXO31Q5XUX0 539 aaPredicted RBP17.48■□□□□ 0.39
SNAI1-201ENST00000244050 UGGT1Q9NYU2 1555 aa17.48■□□□□ 0.39
SNAI1-201ENST00000244050 NEURL4Q96JN8 1562 aa17.46■□□□□ 0.39
SNAI1-201ENST00000244050 CARD11Q9BXL7 1154 aa17.46■□□□□ 0.39
SNAI1-201ENST00000244050 ROCK2O75116 1388 aaKnown RBP17.46■□□□□ 0.38
SNAI1-201ENST00000244050 SPATA31D1Q6ZQQ2 1576 aa17.45■□□□□ 0.38
SNAI1-201ENST00000244050 TNRQ92752 1358 aa17.45■□□□□ 0.38
SNAI1-201ENST00000244050 UBAP1LF5GYI3 381 aa17.43■□□□□ 0.38
SNAI1-201ENST00000244050 HNRNPUQ00839 825 aaKnown RBP eCLIP17.42■□□□□ 0.38
SNAI1-201ENST00000244050 LAMC1P11047 1609 aa17.42■□□□□ 0.38
SNAI1-201ENST00000244050 SOCS7O14512 581 aa17.41■□□□□ 0.38
SNAI1-201ENST00000244050 CCDC184Q52MB2 194 aa17.41■□□□□ 0.38
SNAI1-201ENST00000244050 ARHGAP31Q2M1Z3 1444 aa17.41■□□□□ 0.38
SNAI1-201ENST00000244050 IFT172Q9UG01 1749 aa17.41■□□□□ 0.38
SNAI1-201ENST00000244050 FKBP8Q14318 412 aa17.39■□□□□ 0.37
SNAI1-201ENST00000244050 STAC3Q96MF2 364 aa17.39■□□□□ 0.37
SNAI1-201ENST00000244050 ADGRB3O60242 1522 aa17.39■□□□□ 0.37
SNAI1-201ENST00000244050 NOS1P29475 1434 aa17.39■□□□□ 0.37
SNAI1-201ENST00000244050 NEFLP07196 543 aa17.39■□□□□ 0.37
SNAI1-201ENST00000244050 SYNMO15061 1565 aa17.38■□□□□ 0.37
SNAI1-201ENST00000244050 MRS2Q9HD23 443 aa17.38■□□□□ 0.37
SNAI1-201ENST00000244050 GPRASP1Q5JY77 1395 aa17.38■□□□□ 0.37
SNAI1-201ENST00000244050 PIK3C2BO00750 1634 aa17.37■□□□□ 0.37
SNAI1-201ENST00000244050 NBPF1Q3BBV0 1214 aa17.36■□□□□ 0.37
SNAI1-201ENST00000244050 NLRP1Q9C000 1473 aa17.36■□□□□ 0.37
SNAI1-201ENST00000244050 ST20-MTHFSA0A0A6YYL1 179 aa17.36■□□□□ 0.37
SNAI1-201ENST00000244050 CHGAP10645 457 aaKnown RBP17.36■□□□□ 0.37
SNAI1-201ENST00000244050 MYOM2P54296 1465 aa17.35■□□□□ 0.37
SNAI1-201ENST00000244050 KIAA1210Q9ULL0 1709 aa17.34■□□□□ 0.37
SNAI1-201ENST00000244050 PPLO60437 1756 aa17.34■□□□□ 0.37
SNAI1-201ENST00000244050 MED14O60244 1454 aa17.34■□□□□ 0.37
SNAI1-201ENST00000244050 CPS1P31327 1500 aa17.34■□□□□ 0.37
SNAI1-201ENST00000244050 ANKLE2Q86XL3 938 aa17.33■□□□□ 0.37
SNAI1-201ENST00000244050 THEMISQ8N1K5 641 aaPredicted RBP17.33■□□□□ 0.37
SNAI1-201ENST00000244050 FAM9BQ8IZU0 186 aa17.31■□□□□ 0.36
SNAI1-201ENST00000244050 ZBED9Q6R2W3 1325 aa17.31■□□□□ 0.36
SNAI1-201ENST00000244050 NPHP4O75161 1426 aaPredicted RBP17.31■□□□□ 0.36
SNAI1-201ENST00000244050 IQGAP1P46940 1657 aa17.3■□□□□ 0.36
SNAI1-201ENST00000244050 POLR3GLQ9BT43 218 aa17.29■□□□□ 0.36
SNAI1-201ENST00000244050 KTN1Q86UP2 1357 aaKnown RBP17.29■□□□□ 0.36
SNAI1-201ENST00000244050 ERVK-7P63135 1459 aa17.29■□□□□ 0.36
SNAI1-201ENST00000244050 ALKQ9UM73 1620 aa17.29■□□□□ 0.36
SNAI1-201ENST00000244050 HSPA1LP34931 641 aa17.29■□□□□ 0.36
SNAI1-201ENST00000244050 SLC52A1Q9NWF4 448 aa17.29■□□□□ 0.36
SNAI1-201ENST00000244050 ADGRF5Q8IZF2 1346 aa17.28■□□□□ 0.36
SNAI1-201ENST00000244050 MYO5BQ9ULV0 1848 aa17.28■□□□□ 0.36
SNAI1-201ENST00000244050 NRXN1Q9ULB1 1477 aa17.27■□□□□ 0.36
SNAI1-201ENST00000244050 RPGRIP1LQ68CZ1 1315 aa17.26■□□□□ 0.35
SNAI1-201ENST00000244050 PIP4K2BP78356 416 aa17.26■□□□□ 0.35
SNAI1-201ENST00000244050 IDI1Q13907 227 aa17.26■□□□□ 0.35
SNAI1-201ENST00000244050 TOM1O60784 492 aa17.26■□□□□ 0.35
SNAI1-201ENST00000244050 BCANQ96GW7 911 aa17.26■□□□□ 0.35
SNAI1-201ENST00000244050 TMEM131LA2VDJ0 1609 aa17.25■□□□□ 0.35
SNAI1-201ENST00000244050 STRCP1A6NGW2 1772 aa17.25■□□□□ 0.35
SNAI1-201ENST00000244050 RALBP1Q15311 655 aa17.24■□□□□ 0.35
SNAI1-201ENST00000244050 NEXMIFQ5QGS0 1516 aa17.24■□□□□ 0.35
SNAI1-201ENST00000244050 SCAF11Q99590 1463 aaKnown RBP17.24■□□□□ 0.35
SNAI1-201ENST00000244050 ERICH6BQ5W0A0 696 aa17.23■□□□□ 0.35
SNAI1-201ENST00000244050 CFAP70Q5T0N1 1121 aa17.23■□□□□ 0.35
SNAI1-201ENST00000244050 TESK2Q96S53 571 aa17.22■□□□□ 0.35
SNAI1-201ENST00000244050 PIK3C2GO75747 1445 aa17.22■□□□□ 0.35
SNAI1-201ENST00000244050 UBR1Q8IWV7 1749 aa17.22■□□□□ 0.35
SNAI1-201ENST00000244050 LRRC7Q96NW7 1537 aa17.21■□□□□ 0.35
SNAI1-201ENST00000244050 MED1Q15648 1581 aaPredicted RBP17.21■□□□□ 0.35
SNAI1-201ENST00000244050 SETBP1Q9Y6X0 1596 aa17.21■□□□□ 0.35
SNAI1-201ENST00000244050 EIF3AQ14152 1382 aaKnown RBP17.21■□□□□ 0.35
SNAI1-201ENST00000244050 TSHZ2Q9NRE2 1034 aa17.2■□□□□ 0.34
SNAI1-201ENST00000244050 PNISRQ8TF01 805 aaKnown RBP17.2■□□□□ 0.34
SNAI1-201ENST00000244050 BRD4O60885 1362 aaPredicted RBP17.19■□□□□ 0.34
SNAI1-201ENST00000244050 ARHGAP23Q9P227 1491 aa17.19■□□□□ 0.34
SNAI1-201ENST00000244050 MYBBP1AQ9BQG0 1328 aaKnown RBP17.19■□□□□ 0.34
SNAI1-201ENST00000244050 VGFO15240 615 aaPredicted RBP17.19■□□□□ 0.34
SNAI1-201ENST00000244050 LTKP29376 864 aa17.19■□□□□ 0.34
SNAI1-201ENST00000244050 SLIT1O75093 1534 aa17.18■□□□□ 0.34
SNAI1-201ENST00000244050 TMF1P82094 1093 aa17.17■□□□□ 0.34
SNAI1-201ENST00000244050 NUTM2DQ5VT03 806 aaPredicted RBP17.17■□□□□ 0.34
SNAI1-201ENST00000244050 TMC1Q8TDI8 760 aa17.17■□□□□ 0.34
SNAI1-201ENST00000244050 STAG3Q9UJ98 1225 aa17.17■□□□□ 0.34
SNAI1-201ENST00000244050 PER1O15534 1290 aaPredicted RBP17.16■□□□□ 0.34
SNAI1-201ENST00000244050 C14orf93Q9H972 538 aaKnown RBP17.16■□□□□ 0.34
SNAI1-201ENST00000244050 LRPPRCP42704 1394 aaKnown RBP17.15■□□□□ 0.34
SNAI1-201ENST00000244050 PARD3Q8TEW0 1356 aa17.15■□□□□ 0.34
SNAI1-201ENST00000244050 ZFYVE9O95405 1425 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms