RNA–Protein interactions for RNA: ENST00000243077.7

LRP1-201, Transcript of LDL receptor related protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRP1, Length 14,897 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-201ENST00000243077 PANK3Q9H999 370 aa10.93□□□□□ -0.66
LRP1-201ENST00000243077 PIP4K2AP48426 406 aaPredicted RBP10.93□□□□□ -0.66
LRP1-201ENST00000243077 PRKRIP1Q9H875 184 aaPredicted RBP10.93□□□□□ -0.66
LRP1-201ENST00000243077 CCDC173Q0VFZ6 552 aa10.93□□□□□ -0.66
LRP1-201ENST00000243077 NOL10Q9BSC4 688 aaKnown RBP10.92□□□□□ -0.66
LRP1-201ENST00000243077 CPLX1O14810 134 aa10.92□□□□□ -0.66
LRP1-201ENST00000243077 COG3Q96JB2 828 aa10.92□□□□□ -0.66
LRP1-201ENST00000243077 HOMER1Q86YM7 354 aa10.92□□□□□ -0.66
LRP1-201ENST00000243077 ZNF771Q7L3S4 317 aaPredicted RBP10.91□□□□□ -0.66
LRP1-201ENST00000243077 RUFY1Q96T51 708 aa10.91□□□□□ -0.66
LRP1-201ENST00000243077 XBP1P17861 261 aa10.91□□□□□ -0.66
LRP1-201ENST00000243077 CAGE1Q8TC20 777 aa10.91□□□□□ -0.66
LRP1-201ENST00000243077 ZNF428Q96B54 188 aa10.91□□□□□ -0.66
LRP1-201ENST00000243077 CSB-PGBD3P0DP91 1061 aa10.91□□□□□ -0.66
LRP1-201ENST00000243077 DZIP1LQ8IYY4 767 aaKnown RBP10.91□□□□□ -0.66
LRP1-201ENST00000243077 ZRSR2Q15696 482 aaKnown RBP10.91□□□□□ -0.66
LRP1-201ENST00000243077 NINLQ9Y2I6 1382 aa10.91□□□□□ -0.66
LRP1-201ENST00000243077 PDCL2Q8N4E4 241 aa10.91□□□□□ -0.66
LRP1-201ENST00000243077 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.9□□□□□ -0.66
LRP1-201ENST00000243077 C1orf141Q5JVX7 400 aa10.9□□□□□ -0.66
LRP1-201ENST00000243077 BRMS1Q9HCU9 246 aa10.9□□□□□ -0.66
LRP1-201ENST00000243077 CCDC144AA2RUR9 1427 aa10.9□□□□□ -0.66
LRP1-201ENST00000243077 LUC7LQ9NQ29 371 aaKnown RBP10.9□□□□□ -0.66
LRP1-201ENST00000243077 PDE3AQ14432 1141 aa10.9□□□□□ -0.66
LRP1-201ENST00000243077 CCDC73Q6ZRK6 1079 aa10.9□□□□□ -0.66
LRP1-201ENST00000243077 STK26Q9P289 416 aa10.9□□□□□ -0.66
LRP1-201ENST00000243077 ERICH2A1L162 156 aa10.9□□□□□ -0.66
LRP1-201ENST00000243077 GNAI1P63096 354 aa10.9□□□□□ -0.66
LRP1-201ENST00000243077 G3BP1Q13283 466 aaKnown RBP eCLIP10.9□□□□□ -0.673e-9■□□□□ 8.8
LRP1-201ENST00000243077 SLC4A10Q6U841 1118 aa10.9□□□□□ -0.67
LRP1-201ENST00000243077 OLFM4Q6UX06 510 aa10.9□□□□□ -0.67
LRP1-201ENST00000243077 RUNDC1Q96C34 613 aa10.9□□□□□ -0.67
LRP1-201ENST00000243077 G3V3G9 751 aa10.9□□□□□ -0.67
LRP1-201ENST00000243077 DCAF8Q5TAQ9 597 aa10.9□□□□□ -0.67
LRP1-201ENST00000243077 SOGA1O94964 1423 aa10.89□□□□□ -0.67
LRP1-201ENST00000243077 GGT6Q6P531 493 aa10.89□□□□□ -0.67
LRP1-201ENST00000243077 RAPGEF2Q9Y4G8 1499 aa10.89□□□□□ -0.67
LRP1-201ENST00000243077 SMC3Q9UQE7 1217 aa10.89□□□□□ -0.67
LRP1-201ENST00000243077 BRD4O60885 1362 aaPredicted RBP10.89□□□□□ -0.67
LRP1-201ENST00000243077 RABEP1Q15276 862 aa10.88□□□□□ -0.67
LRP1-201ENST00000243077 IFIT2P09913 472 aaKnown RBP10.88□□□□□ -0.67
LRP1-201ENST00000243077 NGDNQ8NEJ9 315 aaKnown RBP10.88□□□□□ -0.67
LRP1-201ENST00000243077 KANK4Q5T7N3 995 aaPredicted RBP10.88□□□□□ -0.67
LRP1-201ENST00000243077 APBB1O00213 710 aa10.88□□□□□ -0.67
LRP1-201ENST00000243077 CIZ1Q9ULV3 898 aaPredicted RBP10.88□□□□□ -0.67
LRP1-201ENST00000243077 CHMP3Q9Y3E7 222 aa10.88□□□□□ -0.67
LRP1-201ENST00000243077 NASPP49321 788 aaPredicted RBP10.88□□□□□ -0.67
LRP1-201ENST00000243077 ST20-MTHFSA0A0A6YYL1 179 aa10.88□□□□□ -0.67
LRP1-201ENST00000243077 PAK3O75914 559 aaPredicted RBP10.88□□□□□ -0.67
LRP1-201ENST00000243077 ANKRD1Q15327 319 aa10.88□□□□□ -0.67
LRP1-201ENST00000243077 CCDC191Q8NCU4 936 aa10.88□□□□□ -0.67
LRP1-201ENST00000243077 C9orf78Q9NZ63 289 aaPredicted RBP10.88□□□□□ -0.67
LRP1-201ENST00000243077 FRAT2O75474 233 aaPredicted RBP10.87□□□□□ -0.67
LRP1-201ENST00000243077 CCDC7Q96M83 1385 aa10.87□□□□□ -0.67
LRP1-201ENST00000243077 MNS1Q8NEH6 495 aa10.87□□□□□ -0.67
LRP1-201ENST00000243077 CCAR2Q8N163 923 aaKnown RBP10.87□□□□□ -0.67
LRP1-201ENST00000243077 JMYQ8N9B5 988 aa10.87□□□□□ -0.67
LRP1-201ENST00000243077 SCAPERQ9BY12 1400 aa10.87□□□□□ -0.67
LRP1-201ENST00000243077 SMARCE1Q969G3 411 aa10.87□□□□□ -0.67
LRP1-201ENST00000243077 PES1O00541 588 aaKnown RBP10.86□□□□□ -0.67
LRP1-201ENST00000243077 RILPL2Q969X0 211 aa10.86□□□□□ -0.67
LRP1-201ENST00000243077 C22orf23Q9BZE7 217 aa10.86□□□□□ -0.67
LRP1-201ENST00000243077 ERC1Q8IUD2 1116 aa10.86□□□□□ -0.67
LRP1-201ENST00000243077 SRCIN1Q9C0H9 1055 aa10.86□□□□□ -0.67
LRP1-201ENST00000243077 CREBRFQ8IUR6 639 aa10.85□□□□□ -0.67
LRP1-201ENST00000243077 CNTLNQ9NXG0 1405 aa10.85□□□□□ -0.67
LRP1-201ENST00000243077 MCTP1Q6DN14 999 aa10.85□□□□□ -0.67
LRP1-201ENST00000243077 ERLIN2O94905 339 aa10.85□□□□□ -0.67
LRP1-201ENST00000243077 ZNF396Q96N95 335 aaPredicted RBP10.85□□□□□ -0.67
LRP1-201ENST00000243077 SART3Q15020 963 aaKnown RBP10.85□□□□□ -0.67
LRP1-201ENST00000243077 KIF3BO15066 747 aa10.85□□□□□ -0.67
LRP1-201ENST00000243077 GCC1Q96CN9 775 aa10.85□□□□□ -0.67
LRP1-201ENST00000243077 TCEAL9Q9UHQ7 104 aa10.85□□□□□ -0.67
LRP1-201ENST00000243077 USP8P40818 1118 aa10.85□□□□□ -0.67
LRP1-201ENST00000243077 FILIP1LQ4L180 1135 aa10.85□□□□□ -0.67
LRP1-201ENST00000243077 GTF2E1P29083 439 aaPredicted RBP10.84□□□□□ -0.67
LRP1-201ENST00000243077 IQCEQ6IPM2 695 aa10.84□□□□□ -0.67
LRP1-201ENST00000243077 CCDC88BA6NC98 1476 aa10.84□□□□□ -0.67
LRP1-201ENST00000243077 CDC45O75419 566 aa10.84□□□□□ -0.67
LRP1-201ENST00000243077 EIF4G1Q04637 1599 aaKnown RBP10.84□□□□□ -0.67
LRP1-201ENST00000243077 USP47Q96K76 1375 aa10.84□□□□□ -0.67
LRP1-201ENST00000243077 TAOK2Q9UL54 1235 aa10.84□□□□□ -0.67
LRP1-201ENST00000243077 DACH1Q9UI36 760 aa10.84□□□□□ -0.67
LRP1-201ENST00000243077 KIF2AO00139 706 aaPredicted RBP10.84□□□□□ -0.67
LRP1-201ENST00000243077 CNTROBQ8N137 903 aa10.84□□□□□ -0.67
LRP1-201ENST00000243077 GOLGA6L7A0A1B0GV03 622 aa10.84□□□□□ -0.67
LRP1-201ENST00000243077 BICD2Q8TD16 824 aa10.84□□□□□ -0.67
LRP1-201ENST00000243077 TEFQ10587 303 aa10.83□□□□□ -0.68
LRP1-201ENST00000243077 DIAPH1O60610 1272 aaKnown RBP10.83□□□□□ -0.68
LRP1-201ENST00000243077 AEBP1Q8IUX7 1158 aa10.83□□□□□ -0.68
LRP1-201ENST00000243077 RRP9O43818 475 aaKnown RBP10.83□□□□□ -0.68
LRP1-201ENST00000243077 FAM13BQ9NYF5 915 aa10.83□□□□□ -0.68
LRP1-201ENST00000243077 IFT57Q9NWB7 429 aa10.82□□□□□ -0.68
LRP1-201ENST00000243077 CRBNQ96SW2 442 aa10.82□□□□□ -0.68
LRP1-201ENST00000243077 SLC3A2P08195 630 aaKnown RBP10.82□□□□□ -0.68
LRP1-201ENST00000243077 CLUAP1Q96AJ1 413 aa10.82□□□□□ -0.68
LRP1-201ENST00000243077 GNAI3P08754 354 aa10.82□□□□□ -0.68
LRP1-201ENST00000243077 JPH4Q96JJ6 628 aa10.82□□□□□ -0.68
LRP1-201ENST00000243077 PLEKHG5O94827 1062 aa10.82□□□□□ -0.68
LRP1-201ENST00000243077 VSIG10Q8N0Z9 540 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms