RNA–Protein interactions for RNA: ENST00000239852.10

MTRF1-201, Transcript of mitochondrial translation release factor 1, humanhuman

TSL 1 (best)

Gene MTRF1, Length 1,561 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTRF1-201ENST00000239852 A2MP01023 1474 aa11.22□□□□□ -0.61
MTRF1-201ENST00000239852 PRDM15P57071 1507 aaPredicted RBP11.21□□□□□ -0.61
MTRF1-201ENST00000239852 SAMD9LQ8IVG5 1584 aa11.19□□□□□ -0.62
MTRF1-201ENST00000239852 SPAG9O60271 1321 aaKnown RBP11.19□□□□□ -0.62
MTRF1-201ENST00000239852 NKTRP30414 1462 aaKnown RBP11.18□□□□□ -0.62
MTRF1-201ENST00000239852 USP21Q9UK80 565 aa11.17□□□□□ -0.62
MTRF1-201ENST00000239852 LTKP29376 864 aa11.16□□□□□ -0.62
MTRF1-201ENST00000239852 TXNDC2Q86VQ3 553 aa11.16□□□□□ -0.62
MTRF1-201ENST00000239852 CDC42BPBQ9Y5S2 1711 aa11.16□□□□□ -0.62
MTRF1-201ENST00000239852 UTRNP46939 3433 aa11.16□□□□□ -0.62
MTRF1-201ENST00000239852 C14orf37Q86TY3 774 aa11.16□□□□□ -0.62
MTRF1-201ENST00000239852 ATRNO75882 1429 aa11.15□□□□□ -0.62
MTRF1-201ENST00000239852 RTEL1-TNFRSF6BF6WH68 1400 aa11.15□□□□□ -0.62
MTRF1-201ENST00000239852 KDM5AP29375 1690 aaKnown RBP11.15□□□□□ -0.62
MTRF1-201ENST00000239852 R3HDM1Q15032 1099 aaKnown RBP11.15□□□□□ -0.62
MTRF1-201ENST00000239852 SETD5Q9C0A6 1442 aa11.15□□□□□ -0.62
MTRF1-201ENST00000239852 CDK11AQ9UQ88 783 aaPredicted RBP11.15□□□□□ -0.62
MTRF1-201ENST00000239852 NINLQ9Y2I6 1382 aa11.14□□□□□ -0.63
MTRF1-201ENST00000239852 UNC13BO14795 1591 aa11.13□□□□□ -0.63
MTRF1-201ENST00000239852 ARHGAP23Q9P227 1491 aa11.13□□□□□ -0.63
MTRF1-201ENST00000239852 EID1Q9Y6B2 187 aa11.13□□□□□ -0.63
MTRF1-201ENST00000239852 NCOA2Q15596 1464 aa11.13□□□□□ -0.63
MTRF1-201ENST00000239852 GIGYF1O75420 1035 aaPredicted RBP11.12□□□□□ -0.63
MTRF1-201ENST00000239852 PDIA4P13667 645 aaKnown RBP11.12□□□□□ -0.63
MTRF1-201ENST00000239852 FNBP4Q8N3X1 1017 aaPredicted RBP11.12□□□□□ -0.63
MTRF1-201ENST00000239852 SLIT1O75093 1534 aa11.12□□□□□ -0.63
MTRF1-201ENST00000239852 BAG6P46379 1132 aa11.11□□□□□ -0.63
MTRF1-201ENST00000239852 PLCB2Q00722 1185 aa11.11□□□□□ -0.63
MTRF1-201ENST00000239852 LRRC59Q96AG4 307 aaKnown RBP11.11□□□□□ -0.63
MTRF1-201ENST00000239852 PRXQ9BXM0 1461 aa11.11□□□□□ -0.63
MTRF1-201ENST00000239852 ADGBQ8N7X0 1667 aa11.11□□□□□ -0.63
MTRF1-201ENST00000239852 CAPN15O75808 1086 aa11.11□□□□□ -0.63
MTRF1-201ENST00000239852 PRELPP51888 382 aa11.11□□□□□ -0.63
MTRF1-201ENST00000239852 ADAMTS2O95450 1211 aa11.1□□□□□ -0.63
MTRF1-201ENST00000239852 PREX2Q70Z35 1606 aa11.1□□□□□ -0.63
MTRF1-201ENST00000239852 WASHC2CQ9Y4E1 1318 aa11.09□□□□□ -0.63
MTRF1-201ENST00000239852 CADPS2Q86UW7 1296 aa11.09□□□□□ -0.63
MTRF1-201ENST00000239852 TROQ12816 1431 aaPredicted RBP11.09□□□□□ -0.63
MTRF1-201ENST00000239852 UBR1Q8IWV7 1749 aa11.09□□□□□ -0.63
MTRF1-201ENST00000239852 CLIP1P30622 1438 aa11.08□□□□□ -0.64
MTRF1-201ENST00000239852 INO80Q9ULG1 1556 aaPredicted RBP11.08□□□□□ -0.64
MTRF1-201ENST00000239852 PNPLA6Q8IY17 1366 aa11.08□□□□□ -0.64
MTRF1-201ENST00000239852 CHD4Q14839 1912 aa11.08□□□□□ -0.64
MTRF1-201ENST00000239852 NCOA3Q9Y6Q9 1424 aa11.07□□□□□ -0.64
MTRF1-201ENST00000239852 BRINP3Q76B58 766 aa11.07□□□□□ -0.64
MTRF1-201ENST00000239852 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.07□□□□□ -0.64
MTRF1-201ENST00000239852 PPP1R1BQ9UD71 204 aaPredicted RBP11.07□□□□□ -0.64
MTRF1-201ENST00000239852 NEFLP07196 543 aa11.07□□□□□ -0.64
MTRF1-201ENST00000239852 GJD4Q96KN9 370 aaPredicted RBP11.06□□□□□ -0.64
MTRF1-201ENST00000239852 SPHKAPQ2M3C7 1700 aa11.06□□□□□ -0.64
MTRF1-201ENST00000239852 RALGAPBQ86X10 1494 aa11.06□□□□□ -0.64
MTRF1-201ENST00000239852 MROH1Q8NDA8 1641 aa11.05□□□□□ -0.64
MTRF1-201ENST00000239852 CENPBP07199 599 aaPredicted RBP11.05□□□□□ -0.64
MTRF1-201ENST00000239852 TMEM132AQ24JP5 1023 aa11.05□□□□□ -0.64
MTRF1-201ENST00000239852 MAST1Q9Y2H9 1570 aa11.05□□□□□ -0.64
MTRF1-201ENST00000239852 CAMTA1Q9Y6Y1 1673 aa11.05□□□□□ -0.64
MTRF1-201ENST00000239852 ATF3P18847 181 aa11.04□□□□□ -0.64
MTRF1-201ENST00000239852 SLC26A8Q96RN1 970 aa11.03□□□□□ -0.64
MTRF1-201ENST00000239852 SYCP2Q9BX26 1530 aa11.03□□□□□ -0.64
MTRF1-201ENST00000239852 PTCH1Q13635 1447 aa11.03□□□□□ -0.64
MTRF1-201ENST00000239852 C19orf44Q9H6X5 657 aa11.03□□□□□ -0.64
MTRF1-201ENST00000239852 DHX29Q7Z478 1369 aaKnown RBP11.02□□□□□ -0.65
MTRF1-201ENST00000239852 PLSCR2Q9NRY7 297 aa11.02□□□□□ -0.65
MTRF1-201ENST00000239852 TET3O43151 1660 aa11.01□□□□□ -0.65
MTRF1-201ENST00000239852 KIF3BO15066 747 aa11.01□□□□□ -0.65
MTRF1-201ENST00000239852 HNRNPMP52272 730 aaKnown RBP eCLIP11.01□□□□□ -0.65
MTRF1-201ENST00000239852 SP7Q8TDD2 431 aaPredicted RBP11.01□□□□□ -0.65
MTRF1-201ENST00000239852 ERVK-7P63135 1459 aa11.01□□□□□ -0.65
MTRF1-201ENST00000239852 ARHGAP35Q9NRY4 1499 aa11.01□□□□□ -0.65
MTRF1-201ENST00000239852 EN1Q05925 392 aaPredicted RBP11□□□□□ -0.65
MTRF1-201ENST00000239852 SPON1Q9HCB6 807 aa11□□□□□ -0.65
MTRF1-201ENST00000239852 CAMSAP2Q08AD1 1489 aa11□□□□□ -0.65
MTRF1-201ENST00000239852 BRWD3Q6RI45 1802 aa11□□□□□ -0.65
MTRF1-201ENST00000239852 ASXL1Q8IXJ9 1541 aa11□□□□□ -0.65
MTRF1-201ENST00000239852 GPATCH8Q9UKJ3 1502 aaKnown RBP11□□□□□ -0.65
MTRF1-201ENST00000239852 TMEM2Q9UHN6 1383 aa11□□□□□ -0.65
MTRF1-201ENST00000239852 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.99□□□□□ -0.65
MTRF1-201ENST00000239852 KIAA1107Q9UPP5 1409 aa10.99□□□□□ -0.65
MTRF1-201ENST00000239852 SUPT5HO00267 1087 aaKnown RBP10.99□□□□□ -0.65
MTRF1-201ENST00000239852 RNF216Q9NWF9 866 aaPredicted RBP10.99□□□□□ -0.65
MTRF1-201ENST00000239852 ZNF777Q9ULD5 760 aaPredicted RBP10.99□□□□□ -0.65
MTRF1-201ENST00000239852 HSPA6P17066 643 aa10.98□□□□□ -0.65
MTRF1-201ENST00000239852 DSG3P32926 999 aa10.97□□□□□ -0.65
MTRF1-201ENST00000239852 HAP1P54257 671 aaPredicted RBP10.97□□□□□ -0.65
MTRF1-201ENST00000239852 COL13A1Q5TAT6 717 aaPredicted RBP10.96□□□□□ -0.65
MTRF1-201ENST00000239852 TNS4Q8IZW8 715 aa10.96□□□□□ -0.65
MTRF1-201ENST00000239852 KCNQ2O43526 872 aa10.95□□□□□ -0.66
MTRF1-201ENST00000239852 ATP1B4Q9UN42 357 aaPredicted RBP10.95□□□□□ -0.66
MTRF1-201ENST00000239852 DISP2A7MBM2 1401 aa10.95□□□□□ -0.66
MTRF1-201ENST00000239852 PLEKHH2Q8IVE3 1493 aa10.95□□□□□ -0.66
MTRF1-201ENST00000239852 CDC42BPAQ5VT25 1732 aa10.95□□□□□ -0.66
MTRF1-201ENST00000239852 KRT27Q7Z3Y8 459 aa10.94□□□□□ -0.66
MTRF1-201ENST00000239852 SEPT12Q8IYM1 358 aa10.94□□□□□ -0.66
MTRF1-201ENST00000239852 CHD2O14647 1828 aaKnown RBP10.94□□□□□ -0.66
MTRF1-201ENST00000239852 GLI3P10071 1580 aa10.94□□□□□ -0.66
MTRF1-201ENST00000239852 PDE4CQ08493 712 aa10.93□□□□□ -0.66
MTRF1-201ENST00000239852 TAF7LQ5H9L4 462 aa10.93□□□□□ -0.66
MTRF1-201ENST00000239852 CNKSR2Q8WXI2 1034 aa10.93□□□□□ -0.66
MTRF1-201ENST00000239852 HMGB1P09429 215 aaKnown RBP10.92□□□□□ -0.66
MTRF1-201ENST00000239852 DCCP43146 1447 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms