RNA–Protein interactions for RNA: ENST00000238831.8

YIPF4-201, Transcript of Yip1 domain family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene YIPF4, Length 11,949 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF4-201ENST00000238831 VSIG10Q8N0Z9 540 aa10.59□□□□□ -0.71
YIPF4-201ENST00000238831 RALBP1Q15311 655 aa10.59□□□□□ -0.71
YIPF4-201ENST00000238831 BCL2L13Q9BXK5 485 aa10.59□□□□□ -0.71
YIPF4-201ENST00000238831 ATP6V1DQ9Y5K8 247 aa10.59□□□□□ -0.71
YIPF4-201ENST00000238831 SKIDA1Q1XH10 827 aa10.58□□□□□ -0.72
YIPF4-201ENST00000238831 IFIT2P09913 472 aaKnown RBP10.58□□□□□ -0.72
YIPF4-201ENST00000238831 NUP155O75694 1391 aa10.58□□□□□ -0.72
YIPF4-201ENST00000238831 DDX49Q9Y6V7 483 aaKnown RBP10.58□□□□□ -0.72
YIPF4-201ENST00000238831 PLIN1O60240 522 aa10.58□□□□□ -0.72
YIPF4-201ENST00000238831 PSME1Q06323 249 aa10.58□□□□□ -0.72
YIPF4-201ENST00000238831 BICD2Q8TD16 824 aa10.58□□□□□ -0.72
YIPF4-201ENST00000238831 COG3Q96JB2 828 aa10.57□□□□□ -0.72
YIPF4-201ENST00000238831 RB1CC1Q8TDY2 1594 aa10.57□□□□□ -0.72
YIPF4-201ENST00000238831 FHAD1B1AJZ9 1412 aa10.57□□□□□ -0.72
YIPF4-201ENST00000238831 DDX11L8A8MPP1 907 aa10.57□□□□□ -0.72
YIPF4-201ENST00000238831 AK7Q96M32 723 aa10.57□□□□□ -0.72
YIPF4-201ENST00000238831 WRNQ14191 1432 aaPredicted RBP eCLIP10.57□□□□□ -0.72
YIPF4-201ENST00000238831 RUFY2Q8WXA3 655 aa10.57□□□□□ -0.72
YIPF4-201ENST00000238831 EEA1Q15075 1411 aa10.56□□□□□ -0.72
YIPF4-201ENST00000238831 ARHGAP35Q9NRY4 1499 aa10.56□□□□□ -0.72
YIPF4-201ENST00000238831 CEP164Q9UPV0 1460 aa10.56□□□□□ -0.72
YIPF4-201ENST00000238831 OFD1O75665 1012 aa10.56□□□□□ -0.72
YIPF4-201ENST00000238831 TTLL5Q6EMB2 1281 aa10.55□□□□□ -0.72
YIPF4-201ENST00000238831 ZKSCAN1P17029 563 aaPredicted RBP10.55□□□□□ -0.72
YIPF4-201ENST00000238831 MAP7D2Q96T17 732 aa10.55□□□□□ -0.72
YIPF4-201ENST00000238831 EFCAB2Q5VUJ9 269 aa10.54□□□□□ -0.72
YIPF4-201ENST00000238831 SAFBQ15424 915 aaKnown RBP eCLIP10.54□□□□□ -0.72
YIPF4-201ENST00000238831 TEX35Q5T0J7 233 aa10.54□□□□□ -0.72
YIPF4-201ENST00000238831 FAM177BA6PVY3 158 aa10.54□□□□□ -0.72
YIPF4-201ENST00000238831 CDR1P51861 262 aa10.54□□□□□ -0.72
YIPF4-201ENST00000238831 HNRNPMP52272 730 aaKnown RBP eCLIP10.54□□□□□ -0.72
YIPF4-201ENST00000238831 G3BP1Q13283 466 aaKnown RBP eCLIP10.54□□□□□ -0.72
YIPF4-201ENST00000238831 HSP90AA2PQ14568 343 aaPredicted RBP10.54□□□□□ -0.72
YIPF4-201ENST00000238831 IBSPP21815 317 aaPredicted RBP10.54□□□□□ -0.72
YIPF4-201ENST00000238831 DDX58O95786 925 aaKnown RBP10.53□□□□□ -0.72
YIPF4-201ENST00000238831 CAGE1Q8TC20 777 aa10.53□□□□□ -0.72
YIPF4-201ENST00000238831 CARMIL2Q6F5E8 1435 aa10.53□□□□□ -0.72
YIPF4-201ENST00000238831 RDXP35241 583 aaKnown RBP10.53□□□□□ -0.72
YIPF4-201ENST00000238831 PDILTQ8N807 584 aa10.53□□□□□ -0.72
YIPF4-201ENST00000238831 CCDC173Q0VFZ6 552 aa10.53□□□□□ -0.72
YIPF4-201ENST00000238831 VPS37CA5D8V6 355 aaPredicted RBP10.53□□□□□ -0.72
YIPF4-201ENST00000238831 PPM1FP49593 454 aaPredicted RBP10.53□□□□□ -0.72
YIPF4-201ENST00000238831 WASHC4Q2M389 1173 aa10.52□□□□□ -0.72
YIPF4-201ENST00000238831 NEUROD6Q96NK8 337 aa10.52□□□□□ -0.72
YIPF4-201ENST00000238831 CCDC97Q96F63 343 aaPredicted RBP10.52□□□□□ -0.73
YIPF4-201ENST00000238831 CCER2I3L3R5 266 aa10.52□□□□□ -0.73
YIPF4-201ENST00000238831 AIMP1Q12904 312 aaKnown RBP10.52□□□□□ -0.73
YIPF4-201ENST00000238831 SASS6Q6UVJ0 657 aa10.52□□□□□ -0.73
YIPF4-201ENST00000238831 BRMS1Q9HCU9 246 aa10.52□□□□□ -0.73
YIPF4-201ENST00000238831 ATP2B2Q01814 1243 aa10.52□□□□□ -0.73
YIPF4-201ENST00000238831 KAT6BQ8WYB5 2073 aa10.51□□□□□ -0.73
YIPF4-201ENST00000238831 NEFHP12036 1026 aa10.51□□□□□ -0.73
YIPF4-201ENST00000238831 RNF20Q5VTR2 975 aa10.51□□□□□ -0.73
YIPF4-201ENST00000238831 SETD5Q9C0A6 1442 aa10.51□□□□□ -0.73
YIPF4-201ENST00000238831 MPHOSPH9Q99550 1183 aa10.51□□□□□ -0.73
YIPF4-201ENST00000238831 RALYLQ86SE5 291 aaKnown RBP10.51□□□□□ -0.73
YIPF4-201ENST00000238831 RIC3Q7Z5B4 369 aa10.5□□□□□ -0.73
YIPF4-201ENST00000238831 IPO9Q96P70 1041 aaKnown RBP10.5□□□□□ -0.73
YIPF4-201ENST00000238831 MINK1Q8N4C8 1332 aaPredicted RBP10.5□□□□□ -0.73
YIPF4-201ENST00000238831 SF3B2Q13435 895 aaKnown RBP10.5□□□□□ -0.73
YIPF4-201ENST00000238831 CUX2O14529 1486 aa10.5□□□□□ -0.73
YIPF4-201ENST00000238831 ANKRD62A6NC57 917 aa10.5□□□□□ -0.73
YIPF4-201ENST00000238831 PLCD4Q9BRC7 762 aa10.49□□□□□ -0.73
YIPF4-201ENST00000238831 ATF3P18847 181 aa10.49□□□□□ -0.73
YIPF4-201ENST00000238831 SYCP1Q15431 976 aa10.49□□□□□ -0.73
YIPF4-201ENST00000238831 OLFM4Q6UX06 510 aa10.49□□□□□ -0.73
YIPF4-201ENST00000238831 CDK5RAP3Q96JB5 506 aa10.49□□□□□ -0.73
YIPF4-201ENST00000238831 ANKRD30AQ9BXX3 1397 aa10.49□□□□□ -0.73
YIPF4-201ENST00000238831 FKBP5Q13451 457 aaPredicted RBP10.48□□□□□ -0.73
YIPF4-201ENST00000238831 SMC3Q9UQE7 1217 aa10.48□□□□□ -0.73
YIPF4-201ENST00000238831 CARMIL1Q5VZK9 1371 aa10.48□□□□□ -0.73
YIPF4-201ENST00000238831 MNS1Q8NEH6 495 aa10.48□□□□□ -0.73
YIPF4-201ENST00000238831 REC8O95072 547 aa10.48□□□□□ -0.73
YIPF4-201ENST00000238831 IFT57Q9NWB7 429 aa10.48□□□□□ -0.73
YIPF4-201ENST00000238831 MYO6Q9UM54 1294 aa10.47□□□□□ -0.73
YIPF4-201ENST00000238831 CCDC191Q8NCU4 936 aa10.47□□□□□ -0.73
YIPF4-201ENST00000238831 CGNL1Q0VF96 1302 aa10.47□□□□□ -0.73
YIPF4-201ENST00000238831 KRT18P05783 430 aaKnown RBP10.47□□□□□ -0.73
YIPF4-201ENST00000238831 XBP1P17861 261 aa10.47□□□□□ -0.73
YIPF4-201ENST00000238831 SKOR2Q2VWA4 1001 aaPredicted RBP10.47□□□□□ -0.73
YIPF4-201ENST00000238831 NUTM2GQ5VZR2 741 aa10.47□□□□□ -0.73
YIPF4-201ENST00000238831 ZKSCAN2Q63HK3 967 aa10.47□□□□□ -0.73
YIPF4-201ENST00000238831 CCDC73Q6ZRK6 1079 aa10.47□□□□□ -0.73
YIPF4-201ENST00000238831 STK11IPQ8N1F8 1099 aa10.46□□□□□ -0.73
YIPF4-201ENST00000238831 ACBD3Q9H3P7 528 aa10.46□□□□□ -0.73
YIPF4-201ENST00000238831 ATP2B1P20020 1258 aa10.46□□□□□ -0.73
YIPF4-201ENST00000238831 BRPF1P55201 1214 aaPredicted RBP10.46□□□□□ -0.73
YIPF4-201ENST00000238831 ZRSR2Q15696 482 aaKnown RBP10.46□□□□□ -0.73
YIPF4-201ENST00000238831 DCTN1Q14203 1278 aa10.46□□□□□ -0.74
YIPF4-201ENST00000238831 WASHC2AQ641Q2 1341 aa10.46□□□□□ -0.74
YIPF4-201ENST00000238831 RAPGEF4Q8WZA2 1011 aa10.46□□□□□ -0.74
YIPF4-201ENST00000238831 HSP90B2PQ58FF3 399 aa10.45□□□□□ -0.74
YIPF4-201ENST00000238831 SEPT7Q16181 437 aaKnown RBP10.45□□□□□ -0.74
YIPF4-201ENST00000238831 EVC2Q86UK5 1308 aa10.45□□□□□ -0.74
YIPF4-201ENST00000238831 RBM5P52756 815 aaKnown RBP eCLIP10.45□□□□□ -0.74
YIPF4-201ENST00000238831 TSPYL4Q9UJ04 414 aa10.45□□□□□ -0.74
YIPF4-201ENST00000238831 MYO15BQ96JP2 1530 aa10.45□□□□□ -0.74
YIPF4-201ENST00000238831 PANK3Q9H999 370 aa10.45□□□□□ -0.74
YIPF4-201ENST00000238831 MATR3P43243 847 aaKnown RBP eCLIP10.45□□□□□ -0.74
YIPF4-201ENST00000238831 PDCL3Q9H2J4 239 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms