RNA–Protein interactions for RNA: ENST00000233468.4

SF3B6-201, Transcript of splicing factor 3b subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B6, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-201ENST00000233468 LRRC7Q96NW7 1537 aa16.86■□□□□ 0.29
SF3B6-201ENST00000233468 NUP155O75694 1391 aa16.85■□□□□ 0.29
SF3B6-201ENST00000233468 ARHGAP31Q2M1Z3 1444 aa16.85■□□□□ 0.29
SF3B6-201ENST00000233468 XIRP1Q702N8 1843 aaKnown RBP16.84■□□□□ 0.29
SF3B6-201ENST00000233468 PIK3C2BO00750 1634 aa16.83■□□□□ 0.28
SF3B6-201ENST00000233468 MYCNP04198 464 aaPredicted RBP16.83■□□□□ 0.28
SF3B6-201ENST00000233468 LMTK2Q8IWU2 1503 aa16.83■□□□□ 0.28
SF3B6-201ENST00000233468 SCAF11Q99590 1463 aaKnown RBP16.82■□□□□ 0.28
SF3B6-201ENST00000233468 TXNDC2Q86VQ3 553 aa16.81■□□□□ 0.28
SF3B6-201ENST00000233468 TRIM52Q96A61 297 aa16.81■□□□□ 0.28
SF3B6-201ENST00000233468 SLIT1O75093 1534 aa16.8■□□□□ 0.28
SF3B6-201ENST00000233468 ARHGAP23Q9P227 1491 aa16.8■□□□□ 0.28
SF3B6-201ENST00000233468 SYNMO15061 1565 aa16.79■□□□□ 0.28
SF3B6-201ENST00000233468 ZBTB22O15209 634 aa16.77■□□□□ 0.28
SF3B6-201ENST00000233468 RPRD2Q5VT52 1461 aaKnown RBP16.77■□□□□ 0.28
SF3B6-201ENST00000233468 SETD5Q9C0A6 1442 aa16.77■□□□□ 0.27
SF3B6-201ENST00000233468 UNC13BO14795 1591 aa16.77■□□□□ 0.27
SF3B6-201ENST00000233468 IDI1Q13907 227 aa16.76■□□□□ 0.27
SF3B6-201ENST00000233468 SLC52A1Q9NWF4 448 aa16.75■□□□□ 0.27
SF3B6-201ENST00000233468 SAMD1Q6SPF0 538 aaPredicted RBP16.74■□□□□ 0.27
SF3B6-201ENST00000233468 EID1Q9Y6B2 187 aa16.74■□□□□ 0.27
SF3B6-201ENST00000233468 TMEM2Q9UHN6 1383 aa16.74■□□□□ 0.27
SF3B6-201ENST00000233468 CAPN15O75808 1086 aa16.73■□□□□ 0.27
SF3B6-201ENST00000233468 SPINK5Q9NQ38 1064 aaPredicted RBP16.73■□□□□ 0.27
SF3B6-201ENST00000233468 STAG3Q9UJ98 1225 aa16.73■□□□□ 0.27
SF3B6-201ENST00000233468 EFCAB6Q5THR3 1501 aa16.73■□□□□ 0.27
SF3B6-201ENST00000233468 MYO5BQ9ULV0 1848 aa16.73■□□□□ 0.27
SF3B6-201ENST00000233468 GCC2Q8IWJ2 1684 aa16.72■□□□□ 0.27
SF3B6-201ENST00000233468 HRCP23327 699 aa16.72■□□□□ 0.27
SF3B6-201ENST00000233468 RBM33Q96EV2 1170 aaKnown RBP16.72■□□□□ 0.27
SF3B6-201ENST00000233468 KDM5AP29375 1690 aaKnown RBP16.71■□□□□ 0.27
SF3B6-201ENST00000233468 SLC26A8Q96RN1 970 aa16.7■□□□□ 0.26
SF3B6-201ENST00000233468 IQGAP3Q86VI3 1631 aa16.7■□□□□ 0.26
SF3B6-201ENST00000233468 NOS1P29475 1434 aa16.7■□□□□ 0.26
SF3B6-201ENST00000233468 TET3O43151 1660 aa16.69■□□□□ 0.26
SF3B6-201ENST00000233468 TRIM26Q12899 539 aaPredicted RBP16.68■□□□□ 0.26
SF3B6-201ENST00000233468 RAB3GAP2Q9H2M9 1393 aa16.67■□□□□ 0.26
SF3B6-201ENST00000233468 TMEM94Q12767 1356 aa16.66■□□□□ 0.26
SF3B6-201ENST00000233468 MPHOSPH9Q99550 1183 aa16.66■□□□□ 0.26
SF3B6-201ENST00000233468 ADGRB3O60242 1522 aa16.65■□□□□ 0.26
SF3B6-201ENST00000233468 HDGFP51858 240 aaKnown RBP16.65■□□□□ 0.26
SF3B6-201ENST00000233468 RGS17Q9UGC6 210 aaPredicted RBP16.65■□□□□ 0.26
SF3B6-201ENST00000233468 KCNA6P17658 529 aa16.64■□□□□ 0.25
SF3B6-201ENST00000233468 PROSER2Q86WR7 435 aaPredicted RBP16.64■□□□□ 0.25
SF3B6-201ENST00000233468 ROBO1Q9Y6N7 1651 aa16.63■□□□□ 0.25
SF3B6-201ENST00000233468 CHGAP10645 457 aaKnown RBP16.61■□□□□ 0.25
SF3B6-201ENST00000233468 BCANQ96GW7 911 aa16.61■□□□□ 0.25
SF3B6-201ENST00000233468 CHD2O14647 1828 aaKnown RBP16.61■□□□□ 0.25
SF3B6-201ENST00000233468 FAM135BQ49AJ0 1406 aa16.61■□□□□ 0.25
SF3B6-201ENST00000233468 NWD1Q149M9 1564 aa16.6■□□□□ 0.25
SF3B6-201ENST00000233468 TMEM131LA2VDJ0 1609 aa16.59■□□□□ 0.25
SF3B6-201ENST00000233468 ZFYVE9O95405 1425 aa16.59■□□□□ 0.25
SF3B6-201ENST00000233468 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.58■□□□□ 0.24
SF3B6-201ENST00000233468 E9PCH4 1651 aa16.58■□□□□ 0.24
SF3B6-201ENST00000233468 NUTM2DQ5VT03 806 aaPredicted RBP16.57■□□□□ 0.24
SF3B6-201ENST00000233468 RIMS2Q9UQ26 1411 aa16.56■□□□□ 0.24
SF3B6-201ENST00000233468 NKTRP30414 1462 aaKnown RBP16.55■□□□□ 0.24
SF3B6-201ENST00000233468 PLEKHG1Q9ULL1 1385 aa16.54■□□□□ 0.24
SF3B6-201ENST00000233468 PPP1R15AO75807 674 aaPredicted RBP16.54■□□□□ 0.24
SF3B6-201ENST00000233468 ZNF326Q5BKZ1 582 aaKnown RBP16.54■□□□□ 0.24
SF3B6-201ENST00000233468 POTEAQ6S8J7 498 aa16.54■□□□□ 0.24
SF3B6-201ENST00000233468 ZNF219Q9P2Y4 722 aaPredicted RBP16.54■□□□□ 0.24
SF3B6-201ENST00000233468 TRPM2O94759 1503 aa16.54■□□□□ 0.24
SF3B6-201ENST00000233468 PHLPP1O60346 1717 aa16.53■□□□□ 0.24
SF3B6-201ENST00000233468 CCDC144AA2RUR9 1427 aa16.53■□□□□ 0.24
SF3B6-201ENST00000233468 SLAIN2Q9P270 581 aa16.52■□□□□ 0.24
SF3B6-201ENST00000233468 MSH6P52701 1360 aa16.51■□□□□ 0.23
SF3B6-201ENST00000233468 RPGRIP1LQ68CZ1 1315 aa16.49■□□□□ 0.23
SF3B6-201ENST00000233468 ADAMTS13Q76LX8 1427 aa16.49■□□□□ 0.23
SF3B6-201ENST00000233468 TBX22Q9Y458 520 aa16.49■□□□□ 0.23
SF3B6-201ENST00000233468 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.48■□□□□ 0.23
SF3B6-201ENST00000233468 SPHKAPQ2M3C7 1700 aa16.48■□□□□ 0.23
SF3B6-201ENST00000233468 COL16A1Q07092 1604 aaPredicted RBP16.46■□□□□ 0.23
SF3B6-201ENST00000233468 VGFO15240 615 aaPredicted RBP16.46■□□□□ 0.23
SF3B6-201ENST00000233468 SETD1AO15047 1707 aaKnown RBP16.45■□□□□ 0.22
SF3B6-201ENST00000233468 PTPRUQ92729 1446 aa16.45■□□□□ 0.22
SF3B6-201ENST00000233468 ANKRD30BQ9BXX2 1392 aa16.44■□□□□ 0.22
SF3B6-201ENST00000233468 DSG3P32926 999 aa16.44■□□□□ 0.22
SF3B6-201ENST00000233468 C14orf37Q86TY3 774 aa16.44■□□□□ 0.22
SF3B6-201ENST00000233468 NRXN3Q9Y4C0 1643 aa16.42■□□□□ 0.22
SF3B6-201ENST00000233468 AMOTL2Q9Y2J4 779 aa16.42■□□□□ 0.22
SF3B6-201ENST00000233468 DIP2AQ14689 1571 aa16.42■□□□□ 0.22
SF3B6-201ENST00000233468 CLTCL1P53675 1640 aa16.41■□□□□ 0.22
SF3B6-201ENST00000233468 JCADQ9P266 1359 aa16.41■□□□□ 0.22
SF3B6-201ENST00000233468 RGL3Q3MIN7 710 aa16.41■□□□□ 0.22
SF3B6-201ENST00000233468 NCOA3Q9Y6Q9 1424 aa16.41■□□□□ 0.22
SF3B6-201ENST00000233468 LRP6O75581 1613 aa16.41■□□□□ 0.22
SF3B6-201ENST00000233468 C19orf44Q9H6X5 657 aa16.4■□□□□ 0.22
SF3B6-201ENST00000233468 ABCB7O75027 752 aa16.39■□□□□ 0.21
SF3B6-201ENST00000233468 STAC3Q96MF2 364 aa16.39■□□□□ 0.21
SF3B6-201ENST00000233468 PCGF6Q9BYE7 350 aa16.39■□□□□ 0.21
SF3B6-201ENST00000233468 ATF3P18847 181 aa16.38■□□□□ 0.21
SF3B6-201ENST00000233468 PIK3R4Q99570 1358 aa16.38■□□□□ 0.21
SF3B6-201ENST00000233468 SPATA31E1Q6ZUB1 1445 aa16.37■□□□□ 0.21
SF3B6-201ENST00000233468 CADPS2Q86UW7 1296 aa16.37■□□□□ 0.21
SF3B6-201ENST00000233468 AHDC1Q5TGY3 1603 aaPredicted RBP16.37■□□□□ 0.21
SF3B6-201ENST00000233468 XRN1Q8IZH2 1706 aaKnown RBP16.36■□□□□ 0.21
SF3B6-201ENST00000233468 SHPRHQ149N8 1683 aa16.36■□□□□ 0.21
SF3B6-201ENST00000233468 METP08581 1390 aa16.36■□□□□ 0.21
SF3B6-201ENST00000233468 BRINP3Q76B58 766 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms