RNA–Protein interactions for RNA: ENST00000229387.6

RFX4-201, Transcript of regulatory factor X4, humanhuman

TSL 1 (best) BASIC

Gene RFX4, Length 3,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4-201ENST00000229387 CFAP43Q8NDM7 1665 aa7.32□□□□□ -1.24
RFX4-201ENST00000229387 IQGAP2Q13576 1575 aa7.32□□□□□ -1.24
RFX4-201ENST00000229387 GRIPAP1Q4V328 841 aa7.32□□□□□ -1.24
RFX4-201ENST00000229387 KCNG1Q9UIX4 513 aa7.32□□□□□ -1.24
RFX4-201ENST00000229387 LETM1O95202 739 aaPredicted RBP7.31□□□□□ -1.24
RFX4-201ENST00000229387 EIF4G2P78344 907 aaKnown RBP eCLIP7.31□□□□□ -1.24
RFX4-201ENST00000229387 AXDND1Q5T1B0 1012 aaPredicted RBP7.31□□□□□ -1.24
RFX4-201ENST00000229387 ZHX1Q9UKY1 873 aaPredicted RBP7.31□□□□□ -1.24
RFX4-201ENST00000229387 KDM6BO15054 1643 aa7.31□□□□□ -1.24
RFX4-201ENST00000229387 TCERG1O14776 1098 aaKnown RBP7.31□□□□□ -1.24
RFX4-201ENST00000229387 MS4A1P11836 297 aa7.31□□□□□ -1.24
RFX4-201ENST00000229387 SEMA3EO15041 775 aa7.31□□□□□ -1.24
RFX4-201ENST00000229387 LRRIQ1Q96JM4 1722 aa7.3□□□□□ -1.24
RFX4-201ENST00000229387 CADPS2Q86UW7 1296 aa7.3□□□□□ -1.24
RFX4-201ENST00000229387 IFT140Q96RY7 1462 aa7.3□□□□□ -1.24
RFX4-201ENST00000229387 SAMD9Q5K651 1589 aa7.3□□□□□ -1.24
RFX4-201ENST00000229387 DISP1Q96F81 1524 aa7.3□□□□□ -1.24
RFX4-201ENST00000229387 NUP153P49790 1475 aaKnown RBP7.3□□□□□ -1.24
RFX4-201ENST00000229387 ZSCAN20P17040 1043 aaPredicted RBP7.29□□□□□ -1.24
RFX4-201ENST00000229387 ZNF622Q969S3 477 aaKnown RBP eCLIP7.29□□□□□ -1.24
RFX4-201ENST00000229387 PTPN23Q9H3S7 1636 aa7.29□□□□□ -1.24
RFX4-201ENST00000229387 GRIN2AQ12879 1464 aa7.29□□□□□ -1.24
RFX4-201ENST00000229387 GOLGA6L3A6NEY3 463 aa7.29□□□□□ -1.24
RFX4-201ENST00000229387 PTMAP06454 111 aaKnown RBP7.29□□□□□ -1.24
RFX4-201ENST00000229387 TICAM2Q86XR7 235 aa7.29□□□□□ -1.24
RFX4-201ENST00000229387 BACH2Q9BYV9 841 aa7.29□□□□□ -1.24
RFX4-201ENST00000229387 U3KPZ7 1027 aaPredicted RBP7.29□□□□□ -1.24
RFX4-201ENST00000229387 ABCC5O15440 1437 aa7.28□□□□□ -1.24
RFX4-201ENST00000229387 CLUAP1Q96AJ1 413 aa7.28□□□□□ -1.24
RFX4-201ENST00000229387 UGGT2Q9NYU1 1516 aa7.28□□□□□ -1.24
RFX4-201ENST00000229387 ADAMTS12P58397 1594 aa7.28□□□□□ -1.24
RFX4-201ENST00000229387 EHBP1L1Q8N3D4 1523 aa7.28□□□□□ -1.24
RFX4-201ENST00000229387 KIAA0586Q9BVV6 1533 aa7.28□□□□□ -1.24
RFX4-201ENST00000229387 TSPY4P0CV99 314 aa7.28□□□□□ -1.24
RFX4-201ENST00000229387 TSPY10P0CW01 314 aa7.28□□□□□ -1.24
RFX4-201ENST00000229387 PSEN1P49768 467 aa7.28□□□□□ -1.24
RFX4-201ENST00000229387 DENND4BO75064 1496 aaPredicted RBP7.28□□□□□ -1.24
RFX4-201ENST00000229387 RNF123Q5XPI4 1314 aa7.27□□□□□ -1.24
RFX4-201ENST00000229387 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.27□□□□□ -1.25
RFX4-201ENST00000229387 VGLL3A8MV65 326 aa7.27□□□□□ -1.25
RFX4-201ENST00000229387 WWC1Q8IX03 1113 aa7.27□□□□□ -1.25
RFX4-201ENST00000229387 DAPK1P53355 1430 aa7.27□□□□□ -1.25
RFX4-201ENST00000229387 STK25O00506 426 aa7.27□□□□□ -1.25
RFX4-201ENST00000229387 PTMSP20962 102 aa7.27□□□□□ -1.25
RFX4-201ENST00000229387 SUPT6HQ7KZ85 1726 aaKnown RBP7.27□□□□□ -1.25
RFX4-201ENST00000229387 NUP155O75694 1391 aa7.27□□□□□ -1.25
RFX4-201ENST00000229387 FSD2A1L4K1 749 aa7.26□□□□□ -1.25
RFX4-201ENST00000229387 ESPNB1AK53 854 aa7.26□□□□□ -1.25
RFX4-201ENST00000229387 MRS2Q9HD23 443 aa7.26□□□□□ -1.25
RFX4-201ENST00000229387 PDE4AP27815 886 aa7.26□□□□□ -1.25
RFX4-201ENST00000229387 RIPK4P57078 832 aa7.26□□□□□ -1.25
RFX4-201ENST00000229387 HDAC5Q9UQL6 1122 aa7.26□□□□□ -1.25
RFX4-201ENST00000229387 MCCP23508 829 aa7.26□□□□□ -1.25
RFX4-201ENST00000229387 YY1AP1Q9H869 796 aa7.26□□□□□ -1.25
RFX4-201ENST00000229387 WDR70Q9NW82 654 aa7.26□□□□□ -1.25
RFX4-201ENST00000229387 PBRM1Q86U86 1689 aa7.26□□□□□ -1.25
RFX4-201ENST00000229387 EIF4G3O43432 1585 aaKnown RBP7.25□□□□□ -1.25
RFX4-201ENST00000229387 FAM193AP78312 1265 aa7.25□□□□□ -1.25
RFX4-201ENST00000229387 WDR62O43379 1518 aa7.25□□□□□ -1.25
RFX4-201ENST00000229387 FRAT2O75474 233 aaPredicted RBP7.25□□□□□ -1.25
RFX4-201ENST00000229387 HECW1Q76N89 1606 aa7.24□□□□□ -1.25
RFX4-201ENST00000229387 ARHGEF11O15085 1522 aa7.24□□□□□ -1.25
RFX4-201ENST00000229387 XRCC6P12956 609 aaKnown RBP eCLIP7.24□□□□□ -1.25
RFX4-201ENST00000229387 POLA2Q14181 598 aa7.24□□□□□ -1.25
RFX4-201ENST00000229387 KIAA1211Q6ZU35 1233 aa7.24□□□□□ -1.25
RFX4-201ENST00000229387 TRIM44Q96DX7 344 aaPredicted RBP7.24□□□□□ -1.25
RFX4-201ENST00000229387 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.24□□□□□ -1.25
RFX4-201ENST00000229387 HMGB1P09429 215 aaKnown RBP7.24□□□□□ -1.25
RFX4-201ENST00000229387 PTPRGP23470 1445 aa7.24□□□□□ -1.25
RFX4-201ENST00000229387 CARMIL2Q6F5E8 1435 aa7.24□□□□□ -1.25
RFX4-201ENST00000229387 DNTTIP2Q5QJE6 756 aaKnown RBP7.23□□□□□ -1.25
RFX4-201ENST00000229387 DNAJC2Q99543 621 aaKnown RBP7.23□□□□□ -1.25
RFX4-201ENST00000229387 CCDC94Q9BW85 323 aaPredicted RBP7.23□□□□□ -1.25
RFX4-201ENST00000229387 SLC52A1Q9NWF4 448 aa7.23□□□□□ -1.25
RFX4-201ENST00000229387 OFD1O75665 1012 aa7.23□□□□□ -1.25
RFX4-201ENST00000229387 PHF14O94880 888 aa7.23□□□□□ -1.25
RFX4-201ENST00000229387 CARD11Q9BXL7 1154 aa7.23□□□□□ -1.25
RFX4-201ENST00000229387 KIF7Q2M1P5 1343 aa7.23□□□□□ -1.25
RFX4-201ENST00000229387 ANKRD30BQ9BXX2 1392 aa7.23□□□□□ -1.25
RFX4-201ENST00000229387 GEMIN8Q9NWZ8 242 aaKnown RBP7.23□□□□□ -1.25
RFX4-201ENST00000229387 ISY1Q9ULR0 285 aaKnown RBP7.23□□□□□ -1.25
RFX4-201ENST00000229387 TROQ12816 1431 aaPredicted RBP7.23□□□□□ -1.25
RFX4-201ENST00000229387 CEP170Q5SW79 1584 aa7.23□□□□□ -1.25
RFX4-201ENST00000229387 KIAA0556O60303 1618 aa7.22□□□□□ -1.25
RFX4-201ENST00000229387 SYNJ2O15056 1496 aa7.22□□□□□ -1.25
RFX4-201ENST00000229387 ZBED9Q6R2W3 1325 aa7.22□□□□□ -1.25
RFX4-201ENST00000229387 GZF1Q9H116 711 aaPredicted RBP7.22□□□□□ -1.25
RFX4-201ENST00000229387 GPATCH8Q9UKJ3 1502 aaKnown RBP7.22□□□□□ -1.25
RFX4-201ENST00000229387 MIA2Q96PC5 1412 aa7.22□□□□□ -1.25
RFX4-201ENST00000229387 ST20-MTHFSA0A0A6YYL1 179 aa7.22□□□□□ -1.25
RFX4-201ENST00000229387 MFAP1P55081 439 aaKnown RBP7.22□□□□□ -1.25
RFX4-201ENST00000229387 NCOA1Q15788 1441 aa7.21□□□□□ -1.25
RFX4-201ENST00000229387 CLSTN1O94985 981 aa7.21□□□□□ -1.25
RFX4-201ENST00000229387 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.21□□□□□ -1.25
RFX4-201ENST00000229387 PRKRIP1Q9H875 184 aaPredicted RBP7.21□□□□□ -1.25
RFX4-201ENST00000229387 CAMSAP2Q08AD1 1489 aa7.21□□□□□ -1.26
RFX4-201ENST00000229387 DYNC1I1O14576 645 aa7.21□□□□□ -1.26
RFX4-201ENST00000229387 NBPF1Q3BBV0 1214 aa7.21□□□□□ -1.26
RFX4-201ENST00000229387 KDM4CQ9H3R0 1056 aa7.21□□□□□ -1.26
RFX4-201ENST00000229387 ATP10BO94823 1461 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms