RNA–Protein interactions for RNA: ENST00000227266.9

CTSC-201, Transcript of cathepsin C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSC, Length 1,921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSC-201ENST00000227266 ADGRF5Q8IZF2 1346 aa15.88■□□□□ 0.13
CTSC-201ENST00000227266 STAC3Q96MF2 364 aa15.88■□□□□ 0.13
CTSC-201ENST00000227266 UBR1Q8IWV7 1749 aa15.87■□□□□ 0.13
CTSC-201ENST00000227266 SETD1BQ9UPS6 1966 aaKnown RBP15.87■□□□□ 0.13
CTSC-201ENST00000227266 NEXMIFQ5QGS0 1516 aa15.87■□□□□ 0.13
CTSC-201ENST00000227266 HDGFP51858 240 aaKnown RBP15.86■□□□□ 0.13
CTSC-201ENST00000227266 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.86■□□□□ 0.13
CTSC-201ENST00000227266 PRAG1Q86YV5 1406 aa15.86■□□□□ 0.13
CTSC-201ENST00000227266 MYO5BQ9ULV0 1848 aa15.86■□□□□ 0.13
CTSC-201ENST00000227266 ZFYVE9O95405 1425 aa15.85■□□□□ 0.13
CTSC-201ENST00000227266 TXNDC2Q86VQ3 553 aa15.85■□□□□ 0.13
CTSC-201ENST00000227266 EID1Q9Y6B2 187 aa15.85■□□□□ 0.13
CTSC-201ENST00000227266 MYOM2P54296 1465 aa15.85■□□□□ 0.13
CTSC-201ENST00000227266 KDM5AP29375 1690 aaKnown RBP15.85■□□□□ 0.13
CTSC-201ENST00000227266 LTKP29376 864 aa15.84■□□□□ 0.13
CTSC-201ENST00000227266 ZNF142P52746 1687 aaPredicted RBP15.83■□□□□ 0.12
CTSC-201ENST00000227266 BCANQ96GW7 911 aa15.82■□□□□ 0.12
CTSC-201ENST00000227266 PPLO60437 1756 aa15.82■□□□□ 0.12
CTSC-201ENST00000227266 HSPA2P54652 639 aa15.82■□□□□ 0.12
CTSC-201ENST00000227266 SLIT1O75093 1534 aa15.82■□□□□ 0.12
CTSC-201ENST00000227266 ARHGAP23Q9P227 1491 aa15.81■□□□□ 0.12
CTSC-201ENST00000227266 ANKLE2Q86XL3 938 aa15.81■□□□□ 0.12
CTSC-201ENST00000227266 IFT172Q9UG01 1749 aa15.81■□□□□ 0.12
CTSC-201ENST00000227266 NRXN1Q9ULB1 1477 aa15.81■□□□□ 0.12
CTSC-201ENST00000227266 PIK3C2GO75747 1445 aa15.81■□□□□ 0.12
CTSC-201ENST00000227266 CFAP70Q5T0N1 1121 aa15.8■□□□□ 0.12
CTSC-201ENST00000227266 LMTK3Q96Q04 1460 aa15.79■□□□□ 0.12
CTSC-201ENST00000227266 SCAF11Q99590 1463 aaKnown RBP15.79■□□□□ 0.12
CTSC-201ENST00000227266 NBPF1Q3BBV0 1214 aa15.79■□□□□ 0.12
CTSC-201ENST00000227266 ROCK2O75116 1388 aaKnown RBP15.78■□□□□ 0.12
CTSC-201ENST00000227266 C14orf93Q9H972 538 aaKnown RBP15.78■□□□□ 0.12
CTSC-201ENST00000227266 RALGAPBQ86X10 1494 aa15.77■□□□□ 0.11
CTSC-201ENST00000227266 PLEKHG1Q9ULL1 1385 aa15.77■□□□□ 0.11
CTSC-201ENST00000227266 CARD11Q9BXL7 1154 aa15.76■□□□□ 0.11
CTSC-201ENST00000227266 NCKAP5LQ9HCH0 1330 aa15.76■□□□□ 0.11
CTSC-201ENST00000227266 TMEM132EQ6IEE7 984 aa15.74■□□□□ 0.11
CTSC-201ENST00000227266 SLC26A8Q96RN1 970 aa15.74■□□□□ 0.11
CTSC-201ENST00000227266 TRPM1Q7Z4N2 1603 aa15.73■□□□□ 0.11
CTSC-201ENST00000227266 AEBP2Q6ZN18 517 aaPredicted RBP15.72■□□□□ 0.11
CTSC-201ENST00000227266 GPRASP1Q5JY77 1395 aa15.71■□□□□ 0.11
CTSC-201ENST00000227266 ADAMTS13Q76LX8 1427 aa15.71■□□□□ 0.11
CTSC-201ENST00000227266 SETBP1Q9Y6X0 1596 aa15.71■□□□□ 0.11
CTSC-201ENST00000227266 ALKQ9UM73 1620 aa15.71■□□□□ 0.11
CTSC-201ENST00000227266 NPHP4O75161 1426 aaPredicted RBP15.7■□□□□ 0.1
CTSC-201ENST00000227266 STK26Q9P289 416 aa15.7■□□□□ 0.1
CTSC-201ENST00000227266 METP08581 1390 aa15.69■□□□□ 0.1
CTSC-201ENST00000227266 NRXN3Q9Y4C0 1643 aa15.69■□□□□ 0.1
CTSC-201ENST00000227266 EIF4G2P78344 907 aaKnown RBP eCLIP15.68■□□□□ 0.1
CTSC-201ENST00000227266 HIRIP3Q9BW71 556 aaPredicted RBP15.68■□□□□ 0.1
CTSC-201ENST00000227266 TBX22Q9Y458 520 aa15.68■□□□□ 0.1
CTSC-201ENST00000227266 USP47Q96K76 1375 aa15.68■□□□□ 0.1
CTSC-201ENST00000227266 IQGAP1P46940 1657 aa15.68■□□□□ 0.1
CTSC-201ENST00000227266 TRAK1Q9UPV9 953 aa15.68■□□□□ 0.1
CTSC-201ENST00000227266 MED14O60244 1454 aa15.68■□□□□ 0.1
CTSC-201ENST00000227266 KIAA1210Q9ULL0 1709 aa15.68■□□□□ 0.1
CTSC-201ENST00000227266 LAMC1P11047 1609 aa15.67■□□□□ 0.1
CTSC-201ENST00000227266 ADGRB1O14514 1584 aa15.67■□□□□ 0.1
CTSC-201ENST00000227266 HSPA5P11021 654 aaKnown RBP15.67■□□□□ 0.1
CTSC-201ENST00000227266 ASXL1Q8IXJ9 1541 aa15.66■□□□□ 0.1
CTSC-201ENST00000227266 YTHDC2Q9H6S0 1430 aaKnown RBP15.65■□□□□ 0.1
CTSC-201ENST00000227266 POLR1AO95602 1720 aaPredicted RBP15.64■□□□□ 0.09
CTSC-201ENST00000227266 ST20-MTHFSA0A0A6YYL1 179 aa15.64■□□□□ 0.09
CTSC-201ENST00000227266 LRPPRCP42704 1394 aaKnown RBP15.63■□□□□ 0.09
CTSC-201ENST00000227266 DIP2AQ14689 1571 aa15.63■□□□□ 0.09
CTSC-201ENST00000227266 EIF3AQ14152 1382 aaKnown RBP15.62■□□□□ 0.09
CTSC-201ENST00000227266 AMOTL2Q9Y2J4 779 aa15.62■□□□□ 0.09
CTSC-201ENST00000227266 SETD1AO15047 1707 aaKnown RBP15.62■□□□□ 0.09
CTSC-201ENST00000227266 PTPRUQ92729 1446 aa15.61■□□□□ 0.09
CTSC-201ENST00000227266 SAFB2Q14151 953 aaKnown RBP eCLIP15.6■□□□□ 0.09
CTSC-201ENST00000227266 ABCC11Q96J66 1382 aa15.6■□□□□ 0.09
CTSC-201ENST00000227266 PIK3R4Q99570 1358 aa15.6■□□□□ 0.09
CTSC-201ENST00000227266 PRAM1Q96QH2 718 aa15.6■□□□□ 0.09
CTSC-201ENST00000227266 POGKQ9P215 609 aa15.6■□□□□ 0.09
CTSC-201ENST00000227266 STRCQ7RTU9 1775 aa15.59■□□□□ 0.09
CTSC-201ENST00000227266 CENPJQ9HC77 1338 aaPredicted RBP15.59■□□□□ 0.09
CTSC-201ENST00000227266 DMRT2Q9Y5R5 561 aa15.58■□□□□ 0.09
CTSC-201ENST00000227266 ZNF316A6NFI3 1004 aaPredicted RBP15.58■□□□□ 0.08
CTSC-201ENST00000227266 KCNA6P17658 529 aa15.58■□□□□ 0.08
CTSC-201ENST00000227266 WAPLQ7Z5K2 1190 aa15.58■□□□□ 0.08
CTSC-201ENST00000227266 ROBO2Q9HCK4 1378 aa15.57■□□□□ 0.08
CTSC-201ENST00000227266 PLEKHH1Q9ULM0 1364 aa15.56■□□□□ 0.08
CTSC-201ENST00000227266 TECPR2O15040 1411 aa15.56■□□□□ 0.08
CTSC-201ENST00000227266 TESK2Q96S53 571 aa15.55■□□□□ 0.08
CTSC-201ENST00000227266 DLC1Q96QB1 1528 aa15.54■□□□□ 0.08
CTSC-201ENST00000227266 SIRT1Q96EB6 747 aa15.54■□□□□ 0.08
CTSC-201ENST00000227266 FAM135BQ49AJ0 1406 aa15.53■□□□□ 0.08
CTSC-201ENST00000227266 MINK1Q8N4C8 1332 aaPredicted RBP15.53■□□□□ 0.08
CTSC-201ENST00000227266 PTCH1Q13635 1447 aa15.53■□□□□ 0.08
CTSC-201ENST00000227266 CPS1P31327 1500 aa15.52■□□□□ 0.08
CTSC-201ENST00000227266 ZNF335Q9H4Z2 1342 aaPredicted RBP15.52■□□□□ 0.07
CTSC-201ENST00000227266 ARHGEF28Q8N1W1 1705 aaKnown RBP15.52■□□□□ 0.07
CTSC-201ENST00000227266 C11orf95C9JLR9 678 aaPredicted RBP15.52■□□□□ 0.07
CTSC-201ENST00000227266 RBM33Q96EV2 1170 aaKnown RBP15.52■□□□□ 0.07
CTSC-201ENST00000227266 TMF1P82094 1093 aa15.51■□□□□ 0.07
CTSC-201ENST00000227266 POLR3GLQ9BT43 218 aa15.51■□□□□ 0.07
CTSC-201ENST00000227266 XRN1Q8IZH2 1706 aaKnown RBP15.51■□□□□ 0.07
CTSC-201ENST00000227266 PROSER2Q86WR7 435 aaPredicted RBP15.5■□□□□ 0.07
CTSC-201ENST00000227266 DISP3Q9P2K9 1392 aa15.5■□□□□ 0.07
CTSC-201ENST00000227266 KNDC1Q76NI1 1749 aa15.49■□□□□ 0.07
CTSC-201ENST00000227266 SBNO2Q9Y2G9 1366 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms