RNA–Protein interactions for RNA: ENST00000225441.11

RUNDC3A-201, Transcript of RUN domain containing 3A, humanhuman

TSL 1 (best) BASIC

Gene RUNDC3A, Length 1,821 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3A-201ENST00000225441 KDM2AQ9Y2K7 1162 aa33.99■■■■□ 3.03
RUNDC3A-201ENST00000225441 ZMYM3Q14202 1370 aa33.98■■■■□ 3.03
RUNDC3A-201ENST00000225441 ADGRB3O60242 1522 aa33.98■■■■□ 3.03
RUNDC3A-201ENST00000225441 FBXO31Q5XUX0 539 aaPredicted RBP33.97■■■■□ 3.03
RUNDC3A-201ENST00000225441 MROH2AA6NES4 1674 aa33.97■■■■□ 3.03
RUNDC3A-201ENST00000225441 SPATA31D1Q6ZQQ2 1576 aa33.96■■■■□ 3.03
RUNDC3A-201ENST00000225441 ZNF326Q5BKZ1 582 aaKnown RBP33.95■■■■□ 3.02
RUNDC3A-201ENST00000225441 CCDC184Q52MB2 194 aa33.94■■■■□ 3.02
RUNDC3A-201ENST00000225441 SLC52A1Q9NWF4 448 aa33.94■■■■□ 3.02
RUNDC3A-201ENST00000225441 PRAG1Q86YV5 1406 aa33.91■■■■□ 3.02
RUNDC3A-201ENST00000225441 FER1L4A9Z1Z3 1794 aa33.9■■■■□ 3.02
RUNDC3A-201ENST00000225441 IDI1Q13907 227 aa33.89■■■■□ 3.02
RUNDC3A-201ENST00000225441 CHGAP10645 457 aaKnown RBP33.88■■■■□ 3.01
RUNDC3A-201ENST00000225441 KTN1Q86UP2 1357 aaKnown RBP33.88■■■■□ 3.01
RUNDC3A-201ENST00000225441 STAC3Q96MF2 364 aa33.88■■■■□ 3.01
RUNDC3A-201ENST00000225441 FAM9BQ8IZU0 186 aa33.85■■■■□ 3.01
RUNDC3A-201ENST00000225441 IFT172Q9UG01 1749 aa33.84■■■■□ 3.01
RUNDC3A-201ENST00000225441 PPP4R2Q9NY27 417 aa33.83■■■■□ 3.01
RUNDC3A-201ENST00000225441 MADDQ8WXG6 1647 aa33.82■■■■□ 3
RUNDC3A-201ENST00000225441 MYOM2P54296 1465 aa33.81■■■■□ 3
RUNDC3A-201ENST00000225441 TRPM1Q7Z4N2 1603 aa33.81■■■■□ 3
RUNDC3A-201ENST00000225441 TMEM131LA2VDJ0 1609 aa33.8■■■■□ 3
RUNDC3A-201ENST00000225441 RBM19Q9Y4C8 960 aaKnown RBP33.79■■■■□ 3
RUNDC3A-201ENST00000225441 CARD11Q9BXL7 1154 aa33.79■■■■□ 3
RUNDC3A-201ENST00000225441 C3P01024 1663 aa33.78■■■■□ 3
RUNDC3A-201ENST00000225441 RPGRIP1LQ68CZ1 1315 aa33.78■■■■□ 3
RUNDC3A-201ENST00000225441 TNRQ92752 1358 aa33.77■■■■□ 3
RUNDC3A-201ENST00000225441 SMG6Q86US8 1419 aaKnown RBP33.76■■■■□ 3
RUNDC3A-201ENST00000225441 PPLO60437 1756 aa33.76■■■□□ 2.99
RUNDC3A-201ENST00000225441 ADAMTSL3P82987 1691 aa33.74■■■□□ 2.99
RUNDC3A-201ENST00000225441 ANP32EQ9BTT0 268 aa33.73■■■□□ 2.99
RUNDC3A-201ENST00000225441 MYO5BQ9ULV0 1848 aa33.72■■■□□ 2.99
RUNDC3A-201ENST00000225441 CEBPAP49715 358 aaPredicted RBP33.72■■■□□ 2.99
RUNDC3A-201ENST00000225441 NEXMIFQ5QGS0 1516 aa33.71■■■□□ 2.99
RUNDC3A-201ENST00000225441 LAMC1P11047 1609 aa33.71■■■□□ 2.99
RUNDC3A-201ENST00000225441 NRXN1Q9ULB1 1477 aa33.71■■■□□ 2.99
RUNDC3A-201ENST00000225441 RIMS1Q86UR5 1692 aaKnown RBP33.7■■■□□ 2.99
RUNDC3A-201ENST00000225441 ADGRF5Q8IZF2 1346 aa33.69■■■□□ 2.98
RUNDC3A-201ENST00000225441 GPRASP1Q5JY77 1395 aa33.69■■■□□ 2.98
RUNDC3A-201ENST00000225441 STAG3Q9UJ98 1225 aa33.67■■■□□ 2.98
RUNDC3A-201ENST00000225441 A2ML1A8K2U0 1454 aa33.67■■■□□ 2.98
RUNDC3A-201ENST00000225441 RALBP1Q15311 655 aa33.67■■■□□ 2.98
RUNDC3A-201ENST00000225441 NBPF1Q3BBV0 1214 aa33.65■■■□□ 2.98
RUNDC3A-201ENST00000225441 KIAA1210Q9ULL0 1709 aa33.64■■■□□ 2.98
RUNDC3A-201ENST00000225441 BRD4O60885 1362 aaPredicted RBP33.64■■■□□ 2.98
RUNDC3A-201ENST00000225441 NLRP1Q9C000 1473 aa33.63■■■□□ 2.97
RUNDC3A-201ENST00000225441 ZFYVE9O95405 1425 aa33.61■■■□□ 2.97
RUNDC3A-201ENST00000225441 PIK3C2GO75747 1445 aa33.6■■■□□ 2.97
RUNDC3A-201ENST00000225441 ST20-MTHFSA0A0A6YYL1 179 aa33.6■■■□□ 2.97
RUNDC3A-201ENST00000225441 VGFO15240 615 aaPredicted RBP33.6■■■□□ 2.97
RUNDC3A-201ENST00000225441 PNISRQ8TF01 805 aaKnown RBP33.6■■■□□ 2.97
RUNDC3A-201ENST00000225441 KDM5AP29375 1690 aaKnown RBP33.6■■■□□ 2.97
RUNDC3A-201ENST00000225441 PLPPR3Q6T4P5 718 aa33.59■■■□□ 2.97
RUNDC3A-201ENST00000225441 NUDCQ9Y266 331 aa33.59■■■□□ 2.97
RUNDC3A-201ENST00000225441 RNF123Q5XPI4 1314 aa33.59■■■□□ 2.97
RUNDC3A-201ENST00000225441 MYBBP1AQ9BQG0 1328 aaKnown RBP33.57■■■□□ 2.97
RUNDC3A-201ENST00000225441 LRPPRCP42704 1394 aaKnown RBP33.57■■■□□ 2.96
RUNDC3A-201ENST00000225441 FANCIQ9NVI1 1328 aa33.57■■■□□ 2.96
RUNDC3A-201ENST00000225441 IRX6P78412 446 aaPredicted RBP33.56■■■□□ 2.96
RUNDC3A-201ENST00000225441 UBR1Q8IWV7 1749 aa33.55■■■□□ 2.96
RUNDC3A-201ENST00000225441 NUTM2DQ5VT03 806 aaPredicted RBP33.55■■■□□ 2.96
RUNDC3A-201ENST00000225441 TMC1Q8TDI8 760 aa33.55■■■□□ 2.96
RUNDC3A-201ENST00000225441 POLR3GLQ9BT43 218 aa33.55■■■□□ 2.96
RUNDC3A-201ENST00000225441 CFAP70Q5T0N1 1121 aa33.54■■■□□ 2.96
RUNDC3A-201ENST00000225441 RIMS2Q9UQ26 1411 aa33.52■■■□□ 2.96
RUNDC3A-201ENST00000225441 MYO3AQ8NEV4 1616 aa33.5■■■□□ 2.95
RUNDC3A-201ENST00000225441 C14orf93Q9H972 538 aaKnown RBP33.49■■■□□ 2.95
RUNDC3A-201ENST00000225441 INSRP06213 1382 aa33.48■■■□□ 2.95
RUNDC3A-201ENST00000225441 SETBP1Q9Y6X0 1596 aa33.48■■■□□ 2.95
RUNDC3A-201ENST00000225441 IQGAP1P46940 1657 aa33.47■■■□□ 2.95
RUNDC3A-201ENST00000225441 SCAF11Q99590 1463 aaKnown RBP33.45■■■□□ 2.95
RUNDC3A-201ENST00000225441 TMEM2Q9UHN6 1383 aa33.44■■■□□ 2.94
RUNDC3A-201ENST00000225441 PARD3Q8TEW0 1356 aa33.43■■■□□ 2.94
RUNDC3A-201ENST00000225441 ABCF1Q8NE71 845 aaKnown RBP eCLIP33.43■■■□□ 2.94
RUNDC3A-201ENST00000225441 PTPRMP28827 1452 aa33.42■■■□□ 2.94
RUNDC3A-201ENST00000225441 ADGRB1O14514 1584 aa33.41■■■□□ 2.94
RUNDC3A-201ENST00000225441 HDGFP51858 240 aaKnown RBP33.39■■■□□ 2.94
RUNDC3A-201ENST00000225441 NLRP13Q86W25 1043 aa33.39■■■□□ 2.94
RUNDC3A-201ENST00000225441 CEP170BQ9Y4F5 1589 aaPredicted RBP33.38■■■□□ 2.93
RUNDC3A-201ENST00000225441 SLIT1O75093 1534 aa33.35■■■□□ 2.93
RUNDC3A-201ENST00000225441 ARHGAP23Q9P227 1491 aa33.34■■■□□ 2.93
RUNDC3A-201ENST00000225441 PDE3BQ13370 1112 aa33.34■■■□□ 2.93
RUNDC3A-201ENST00000225441 EIF3AQ14152 1382 aaKnown RBP33.34■■■□□ 2.93
RUNDC3A-201ENST00000225441 ALKQ9UM73 1620 aa33.33■■■□□ 2.93
RUNDC3A-201ENST00000225441 ZNF142P52746 1687 aaPredicted RBP33.33■■■□□ 2.93
RUNDC3A-201ENST00000225441 THEMISQ8N1K5 641 aaPredicted RBP33.32■■■□□ 2.93
RUNDC3A-201ENST00000225441 PER1O15534 1290 aaPredicted RBP33.32■■■□□ 2.92
RUNDC3A-201ENST00000225441 TMEM132EQ6IEE7 984 aa33.32■■■□□ 2.92
RUNDC3A-201ENST00000225441 ASXL1Q8IXJ9 1541 aa33.31■■■□□ 2.92
RUNDC3A-201ENST00000225441 SENP3Q9H4L4 574 aaPredicted RBP33.3■■■□□ 2.92
RUNDC3A-201ENST00000225441 TESK2Q96S53 571 aa33.3■■■□□ 2.92
RUNDC3A-201ENST00000225441 B4GALNT3Q6L9W6 998 aa33.29■■■□□ 2.92
RUNDC3A-201ENST00000225441 SETD1BQ9UPS6 1966 aaKnown RBP33.29■■■□□ 2.92
RUNDC3A-201ENST00000225441 NRXN3Q9Y4C0 1643 aa33.28■■■□□ 2.92
RUNDC3A-201ENST00000225441 TMF1P82094 1093 aa33.26■■■□□ 2.92
RUNDC3A-201ENST00000225441 LTKP29376 864 aa33.25■■■□□ 2.91
RUNDC3A-201ENST00000225441 SETD1AO15047 1707 aaKnown RBP33.25■■■□□ 2.91
RUNDC3A-201ENST00000225441 EID1Q9Y6B2 187 aa33.25■■■□□ 2.91
RUNDC3A-201ENST00000225441 TXNDC2Q86VQ3 553 aa33.24■■■□□ 2.91
RUNDC3A-201ENST00000225441 PLEKHG1Q9ULL1 1385 aa33.23■■■□□ 2.91
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms