RNA–Protein interactions for RNA: ENST00000222388.6

ABCF2-201, Transcript of ATP binding cassette subfamily F member 2, humanhuman

TSL 5 BASIC

Gene ABCF2, Length 2,185 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF2-201ENST00000222388 POLR3GLQ9BT43 218 aa17.46■□□□□ 0.39
ABCF2-201ENST00000222388 ZMYM3Q14202 1370 aa17.46■□□□□ 0.39
ABCF2-201ENST00000222388 ERICH6BQ5W0A0 696 aa17.46■□□□□ 0.39
ABCF2-201ENST00000222388 CARD11Q9BXL7 1154 aa17.46■□□□□ 0.39
ABCF2-201ENST00000222388 MROH2AA6NES4 1674 aa17.46■□□□□ 0.38
ABCF2-201ENST00000222388 ERVK-7P63135 1459 aa17.45■□□□□ 0.38
ABCF2-201ENST00000222388 ROCK2O75116 1388 aaKnown RBP17.45■□□□□ 0.38
ABCF2-201ENST00000222388 PIK3C2BO00750 1634 aa17.44■□□□□ 0.38
ABCF2-201ENST00000222388 DCAF11Q8TEB1 546 aa17.43■□□□□ 0.38
ABCF2-201ENST00000222388 CHGAP10645 457 aaKnown RBP17.43■□□□□ 0.38
ABCF2-201ENST00000222388 KDM2AQ9Y2K7 1162 aa17.43■□□□□ 0.38
ABCF2-201ENST00000222388 MADDQ8WXG6 1647 aa17.43■□□□□ 0.38
ABCF2-201ENST00000222388 RBM19Q9Y4C8 960 aaKnown RBP17.42■□□□□ 0.38
ABCF2-201ENST00000222388 SPATA31D1Q6ZQQ2 1576 aa17.42■□□□□ 0.38
ABCF2-201ENST00000222388 C3P01024 1663 aa17.41■□□□□ 0.38
ABCF2-201ENST00000222388 PLPPR3Q6T4P5 718 aa17.41■□□□□ 0.38
ABCF2-201ENST00000222388 RIMS1Q86UR5 1692 aaKnown RBP17.4■□□□□ 0.38
ABCF2-201ENST00000222388 ADGRB3O60242 1522 aa17.39■□□□□ 0.37
ABCF2-201ENST00000222388 CEBPAP49715 358 aaPredicted RBP17.39■□□□□ 0.37
ABCF2-201ENST00000222388 IDI1Q13907 227 aa17.39■□□□□ 0.37
ABCF2-201ENST00000222388 CNGB1Q14028 1251 aaPredicted RBP17.39■□□□□ 0.37
ABCF2-201ENST00000222388 SLC52A1Q9NWF4 448 aa17.39■□□□□ 0.37
ABCF2-201ENST00000222388 MYO5BQ9ULV0 1848 aa17.39■□□□□ 0.37
ABCF2-201ENST00000222388 TRPM1Q7Z4N2 1603 aa17.38■□□□□ 0.37
ABCF2-201ENST00000222388 ADAMTSL3P82987 1691 aa17.38■□□□□ 0.37
ABCF2-201ENST00000222388 ST20-MTHFSA0A0A6YYL1 179 aa17.38■□□□□ 0.37
ABCF2-201ENST00000222388 PPP4R2Q9NY27 417 aa17.38■□□□□ 0.37
ABCF2-201ENST00000222388 NEURL4Q96JN8 1562 aa17.37■□□□□ 0.37
ABCF2-201ENST00000222388 TNRQ92752 1358 aa17.35■□□□□ 0.37
ABCF2-201ENST00000222388 PRAG1Q86YV5 1406 aa17.35■□□□□ 0.37
ABCF2-201ENST00000222388 IFT172Q9UG01 1749 aa17.34■□□□□ 0.37
ABCF2-201ENST00000222388 TMEM131LA2VDJ0 1609 aa17.34■□□□□ 0.37
ABCF2-201ENST00000222388 SMG6Q86US8 1419 aaKnown RBP17.33■□□□□ 0.37
ABCF2-201ENST00000222388 STAG3Q9UJ98 1225 aa17.33■□□□□ 0.37
ABCF2-201ENST00000222388 ANP32EQ9BTT0 268 aa17.33■□□□□ 0.36
ABCF2-201ENST00000222388 PPLO60437 1756 aa17.32■□□□□ 0.36
ABCF2-201ENST00000222388 KTN1Q86UP2 1357 aaKnown RBP17.31■□□□□ 0.36
ABCF2-201ENST00000222388 PNISRQ8TF01 805 aaKnown RBP17.31■□□□□ 0.36
ABCF2-201ENST00000222388 TMC1Q8TDI8 760 aa17.3■□□□□ 0.36
ABCF2-201ENST00000222388 LAMC1P11047 1609 aa17.3■□□□□ 0.36
ABCF2-201ENST00000222388 NUDCQ9Y266 331 aa17.29■□□□□ 0.36
ABCF2-201ENST00000222388 RALBP1Q15311 655 aa17.28■□□□□ 0.36
ABCF2-201ENST00000222388 MYBBP1AQ9BQG0 1328 aaKnown RBP17.28■□□□□ 0.36
ABCF2-201ENST00000222388 NUTM2DQ5VT03 806 aaPredicted RBP17.28■□□□□ 0.36
ABCF2-201ENST00000222388 BRD4O60885 1362 aaPredicted RBP17.27■□□□□ 0.36
ABCF2-201ENST00000222388 MYOM2P54296 1465 aa17.27■□□□□ 0.36
ABCF2-201ENST00000222388 NEXMIFQ5QGS0 1516 aa17.27■□□□□ 0.36
ABCF2-201ENST00000222388 GPRASP1Q5JY77 1395 aa17.27■□□□□ 0.36
ABCF2-201ENST00000222388 A2ML1A8K2U0 1454 aa17.26■□□□□ 0.35
ABCF2-201ENST00000222388 STAC3Q96MF2 364 aa17.26■□□□□ 0.35
ABCF2-201ENST00000222388 RPGRIP1LQ68CZ1 1315 aa17.26■□□□□ 0.35
ABCF2-201ENST00000222388 UBR1Q8IWV7 1749 aa17.26■□□□□ 0.35
ABCF2-201ENST00000222388 ADGRF5Q8IZF2 1346 aa17.26■□□□□ 0.35
ABCF2-201ENST00000222388 NLRP1Q9C000 1473 aa17.25■□□□□ 0.35
ABCF2-201ENST00000222388 LRPPRCP42704 1394 aaKnown RBP17.25■□□□□ 0.35
ABCF2-201ENST00000222388 MYO3AQ8NEV4 1616 aa17.25■□□□□ 0.35
ABCF2-201ENST00000222388 NBPF1Q3BBV0 1214 aa17.25■□□□□ 0.35
ABCF2-201ENST00000222388 B4GALNT3Q6L9W6 998 aa17.24■□□□□ 0.35
ABCF2-201ENST00000222388 PTPRMP28827 1452 aa17.23■□□□□ 0.35
ABCF2-201ENST00000222388 KDM5AP29375 1690 aaKnown RBP17.23■□□□□ 0.35
ABCF2-201ENST00000222388 VGFO15240 615 aaPredicted RBP17.22■□□□□ 0.35
ABCF2-201ENST00000222388 SENP3Q9H4L4 574 aaPredicted RBP17.22■□□□□ 0.35
ABCF2-201ENST00000222388 RNF123Q5XPI4 1314 aa17.22■□□□□ 0.35
ABCF2-201ENST00000222388 NRXN1Q9ULB1 1477 aa17.21■□□□□ 0.35
ABCF2-201ENST00000222388 SETD1BQ9UPS6 1966 aaKnown RBP17.21■□□□□ 0.35
ABCF2-201ENST00000222388 PARD3Q8TEW0 1356 aa17.2■□□□□ 0.34
ABCF2-201ENST00000222388 RIMS2Q9UQ26 1411 aa17.2■□□□□ 0.34
ABCF2-201ENST00000222388 FANCIQ9NVI1 1328 aa17.19■□□□□ 0.34
ABCF2-201ENST00000222388 PIK3C2GO75747 1445 aa17.19■□□□□ 0.34
ABCF2-201ENST00000222388 KIAA1210Q9ULL0 1709 aa17.19■□□□□ 0.34
ABCF2-201ENST00000222388 CEP170BQ9Y4F5 1589 aaPredicted RBP17.18■□□□□ 0.34
ABCF2-201ENST00000222388 CFAP70Q5T0N1 1121 aa17.18■□□□□ 0.34
ABCF2-201ENST00000222388 SENP3-EIF4A1A0A087X0R7 540 aa17.18■□□□□ 0.34
ABCF2-201ENST00000222388 NLRP13Q86W25 1043 aa17.18■□□□□ 0.34
ABCF2-201ENST00000222388 TESK2Q96S53 571 aa17.18■□□□□ 0.34
ABCF2-201ENST00000222388 PER1O15534 1290 aaPredicted RBP17.17■□□□□ 0.34
ABCF2-201ENST00000222388 ZFYVE9O95405 1425 aa17.17■□□□□ 0.34
ABCF2-201ENST00000222388 DISP3Q9P2K9 1392 aa17.17■□□□□ 0.34
ABCF2-201ENST00000222388 TMEM2Q9UHN6 1383 aa17.16■□□□□ 0.34
ABCF2-201ENST00000222388 ZNF142P52746 1687 aaPredicted RBP17.15■□□□□ 0.34
ABCF2-201ENST00000222388 KDM4FA0A1W2PPD8 638 aa17.13■□□□□ 0.33
ABCF2-201ENST00000222388 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.13■□□□□ 0.33
ABCF2-201ENST00000222388 MSH5O43196 834 aa17.13■□□□□ 0.33
ABCF2-201ENST00000222388 TMF1P82094 1093 aa17.13■□□□□ 0.33
ABCF2-201ENST00000222388 THEMISQ8N1K5 641 aaPredicted RBP17.13■□□□□ 0.33
ABCF2-201ENST00000222388 HDGFP51858 240 aaKnown RBP17.12■□□□□ 0.33
ABCF2-201ENST00000222388 C14orf93Q9H972 538 aaKnown RBP17.12■□□□□ 0.33
ABCF2-201ENST00000222388 IQGAP1P46940 1657 aa17.12■□□□□ 0.33
ABCF2-201ENST00000222388 SLIT1O75093 1534 aa17.1■□□□□ 0.33
ABCF2-201ENST00000222388 SETBP1Q9Y6X0 1596 aa17.1■□□□□ 0.33
ABCF2-201ENST00000222388 TMEM132EQ6IEE7 984 aa17.1■□□□□ 0.33
ABCF2-201ENST00000222388 PANK3Q9H999 370 aa17.1■□□□□ 0.33
ABCF2-201ENST00000222388 TXNDC2Q86VQ3 553 aa17.09■□□□□ 0.33
ABCF2-201ENST00000222388 CCDC136Q96JN2 1154 aa17.09■□□□□ 0.33
ABCF2-201ENST00000222388 EID1Q9Y6B2 187 aa17.09■□□□□ 0.33
ABCF2-201ENST00000222388 LTKP29376 864 aa17.09■□□□□ 0.33
ABCF2-201ENST00000222388 CC2D1BQ5T0F9 858 aaKnown RBP17.09■□□□□ 0.33
ABCF2-201ENST00000222388 ALKQ9UM73 1620 aa17.09■□□□□ 0.33
ABCF2-201ENST00000222388 SCAF11Q99590 1463 aaKnown RBP17.09■□□□□ 0.33
ABCF2-201ENST00000222388 ARHGAP23Q9P227 1491 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms