RNA–Protein interactions for RNA: ENST00000222214.9

GCDH-201, Transcript of glutaryl-CoA dehydrogenase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GCDH, Length 1,956 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-201ENST00000222214 RPGRIP1LQ68CZ1 1315 aa24.13■■□□□ 1.45
GCDH-201ENST00000222214 PIK3C2BO00750 1634 aa24.12■■□□□ 1.45
GCDH-201ENST00000222214 DISP3Q9P2K9 1392 aa24.1■■□□□ 1.45
GCDH-201ENST00000222214 PPLO60437 1756 aa24.1■■□□□ 1.45
GCDH-201ENST00000222214 RALBP1Q15311 655 aa24.1■■□□□ 1.45
GCDH-201ENST00000222214 CDCA8Q53HL2 280 aa24.1■■□□□ 1.45
GCDH-201ENST00000222214 AGLP35573 1532 aa24.09■■□□□ 1.45
GCDH-201ENST00000222214 SIGLEC1Q9BZZ2 1709 aa24.09■■□□□ 1.45
GCDH-201ENST00000222214 HNRNPUQ00839 825 aaKnown RBP eCLIP24.09■■□□□ 1.45
GCDH-201ENST00000222214 CFAP65Q6ZU64 1925 aaKnown RBP24.09■■□□□ 1.45
GCDH-201ENST00000222214 SETBP1Q9Y6X0 1596 aa24.08■■□□□ 1.45
GCDH-201ENST00000222214 CCDC184Q52MB2 194 aa24.08■■□□□ 1.45
GCDH-201ENST00000222214 PPP6R1Q9UPN7 881 aa24.07■■□□□ 1.44
GCDH-201ENST00000222214 KIF13AQ9H1H9 1805 aa24.07■■□□□ 1.44
GCDH-201ENST00000222214 SYNMO15061 1565 aa24.06■■□□□ 1.44
GCDH-201ENST00000222214 ADGRF5Q8IZF2 1346 aa24.06■■□□□ 1.44
GCDH-201ENST00000222214 CHGAP10645 457 aaKnown RBP24.03■■□□□ 1.44
GCDH-201ENST00000222214 SLC52A1Q9NWF4 448 aa24.03■■□□□ 1.44
GCDH-201ENST00000222214 PIK3C2GO75747 1445 aa24.02■■□□□ 1.44
GCDH-201ENST00000222214 MYBBP1AQ9BQG0 1328 aaKnown RBP24.02■■□□□ 1.44
GCDH-201ENST00000222214 BRD4O60885 1362 aaPredicted RBP24.01■■□□□ 1.43
GCDH-201ENST00000222214 PREX1Q8TCU6 1659 aa24.01■■□□□ 1.43
GCDH-201ENST00000222214 MYO3AQ8NEV4 1616 aa24.01■■□□□ 1.43
GCDH-201ENST00000222214 PER1O15534 1290 aaPredicted RBP24.01■■□□□ 1.43
GCDH-201ENST00000222214 CFAP70Q5T0N1 1121 aa24.01■■□□□ 1.43
GCDH-201ENST00000222214 FAM9BQ8IZU0 186 aa24.01■■□□□ 1.43
GCDH-201ENST00000222214 PARD3Q8TEW0 1356 aa23.99■■□□□ 1.43
GCDH-201ENST00000222214 SBNO2Q9Y2G9 1366 aa23.97■■□□□ 1.43
GCDH-201ENST00000222214 ZBED9Q6R2W3 1325 aa23.97■■□□□ 1.43
GCDH-201ENST00000222214 ARHGEF40Q8TER5 1519 aa23.96■■□□□ 1.43
GCDH-201ENST00000222214 C14orf93Q9H972 538 aaKnown RBP23.96■■□□□ 1.43
GCDH-201ENST00000222214 VGFO15240 615 aaPredicted RBP23.96■■□□□ 1.43
GCDH-201ENST00000222214 TMC1Q8TDI8 760 aa23.96■■□□□ 1.43
GCDH-201ENST00000222214 KDM5AP29375 1690 aaKnown RBP23.96■■□□□ 1.43
GCDH-201ENST00000222214 NEXMIFQ5QGS0 1516 aa23.95■■□□□ 1.43
GCDH-201ENST00000222214 ZFYVE9O95405 1425 aa23.95■■□□□ 1.42
GCDH-201ENST00000222214 PANK3Q9H999 370 aa23.94■■□□□ 1.42
GCDH-201ENST00000222214 SUPT16HQ9Y5B9 1047 aaKnown RBP23.94■■□□□ 1.42
GCDH-201ENST00000222214 NLRP13Q86W25 1043 aa23.92■■□□□ 1.42
GCDH-201ENST00000222214 ADGRB1O14514 1584 aa23.91■■□□□ 1.42
GCDH-201ENST00000222214 IDI1Q13907 227 aa23.91■■□□□ 1.42
GCDH-201ENST00000222214 PNISRQ8TF01 805 aaKnown RBP23.91■■□□□ 1.42
GCDH-201ENST00000222214 ERVK-7P63135 1459 aa23.9■■□□□ 1.42
GCDH-201ENST00000222214 TMEM131LA2VDJ0 1609 aa23.9■■□□□ 1.42
GCDH-201ENST00000222214 NEFLP07196 543 aa23.89■■□□□ 1.42
GCDH-201ENST00000222214 CNGB1Q14028 1251 aaPredicted RBP23.89■■□□□ 1.42
GCDH-201ENST00000222214 MYOM1P52179 1685 aa23.88■■□□□ 1.41
GCDH-201ENST00000222214 LRPPRCP42704 1394 aaKnown RBP23.87■■□□□ 1.41
GCDH-201ENST00000222214 CENPJQ9HC77 1338 aaPredicted RBP23.87■■□□□ 1.41
GCDH-201ENST00000222214 CLTCQ00610 1675 aaKnown RBP23.86■■□□□ 1.41
GCDH-201ENST00000222214 KNSTRNQ9Y448 316 aa23.85■■□□□ 1.41
GCDH-201ENST00000222214 NPC1L1Q9UHC9 1359 aa23.84■■□□□ 1.41
GCDH-201ENST00000222214 SPATA31D1Q6ZQQ2 1576 aa23.84■■□□□ 1.41
GCDH-201ENST00000222214 MYO5BQ9ULV0 1848 aa23.83■■□□□ 1.4
GCDH-201ENST00000222214 QRICH2Q9H0J4 1663 aa23.82■■□□□ 1.4
GCDH-201ENST00000222214 ASXL1Q8IXJ9 1541 aa23.81■■□□□ 1.4
GCDH-201ENST00000222214 INSRP06213 1382 aa23.81■■□□□ 1.4
GCDH-201ENST00000222214 CC2D1BQ5T0F9 858 aaKnown RBP23.79■■□□□ 1.4
GCDH-201ENST00000222214 FKBP8Q14318 412 aa23.78■■□□□ 1.4
GCDH-201ENST00000222214 TRAK1Q9UPV9 953 aa23.78■■□□□ 1.4
GCDH-201ENST00000222214 FBXO31Q5XUX0 539 aaPredicted RBP23.77■■□□□ 1.4
GCDH-201ENST00000222214 PELP1Q8IZL8 1130 aaKnown RBP23.77■■□□□ 1.4
GCDH-201ENST00000222214 PUS7Q96PZ0 661 aaKnown RBP23.77■■□□□ 1.4
GCDH-201ENST00000222214 ARHGEF28Q8N1W1 1705 aaKnown RBP23.77■■□□□ 1.4
GCDH-201ENST00000222214 AMER1Q5JTC6 1135 aaPredicted RBP23.76■■□□□ 1.39
GCDH-201ENST00000222214 TMEM132EQ6IEE7 984 aa23.74■■□□□ 1.39
GCDH-201ENST00000222214 ESF1Q9H501 851 aaKnown RBP23.74■■□□□ 1.39
GCDH-201ENST00000222214 STAG3Q9UJ98 1225 aa23.72■■□□□ 1.39
GCDH-201ENST00000222214 SMG6Q86US8 1419 aaKnown RBP23.71■■□□□ 1.39
GCDH-201ENST00000222214 NUTM2DQ5VT03 806 aaPredicted RBP23.7■■□□□ 1.38
GCDH-201ENST00000222214 A2ML1A8K2U0 1454 aa23.69■■□□□ 1.38
GCDH-201ENST00000222214 MLECQ14165 292 aa23.69■■□□□ 1.38
GCDH-201ENST00000222214 EVC2Q86UK5 1308 aa23.68■■□□□ 1.38
GCDH-201ENST00000222214 ZMYM3Q14202 1370 aa23.68■■□□□ 1.38
GCDH-201ENST00000222214 ERICH6BQ5W0A0 696 aa23.67■■□□□ 1.38
GCDH-201ENST00000222214 ALKQ9UM73 1620 aa23.66■■□□□ 1.38
GCDH-201ENST00000222214 PPP2R1AP30153 589 aa23.65■■□□□ 1.38
GCDH-201ENST00000222214 BLMP54132 1417 aaPredicted RBP23.64■■□□□ 1.38
GCDH-201ENST00000222214 NUDCQ9Y266 331 aa23.64■■□□□ 1.38
GCDH-201ENST00000222214 YTHDC2Q9H6S0 1430 aaKnown RBP23.63■■□□□ 1.37
GCDH-201ENST00000222214 USP32Q8NFA0 1604 aa23.63■■□□□ 1.37
GCDH-201ENST00000222214 RIMS2Q9UQ26 1411 aa23.62■■□□□ 1.37
GCDH-201ENST00000222214 TULP4Q9NRJ4 1543 aa23.62■■□□□ 1.37
GCDH-201ENST00000222214 NINLQ9Y2I6 1382 aa23.62■■□□□ 1.37
GCDH-201ENST00000222214 PTPRMP28827 1452 aa23.62■■□□□ 1.37
GCDH-201ENST00000222214 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.61■■□□□ 1.37
GCDH-201ENST00000222214 CARD14Q9BXL6 1004 aa23.6■■□□□ 1.37
GCDH-201ENST00000222214 PDE3BQ13370 1112 aa23.6■■□□□ 1.37
GCDH-201ENST00000222214 HDGFP51858 240 aaKnown RBP23.58■■□□□ 1.37
GCDH-201ENST00000222214 DLC1Q96QB1 1528 aa23.58■■□□□ 1.37
GCDH-201ENST00000222214 TNRQ92752 1358 aa23.57■■□□□ 1.36
GCDH-201ENST00000222214 NSD3Q9BZ95 1437 aa23.56■■□□□ 1.36
GCDH-201ENST00000222214 ANKRD36BQ8N2N9 1353 aa23.56■■□□□ 1.36
GCDH-201ENST00000222214 SETD1AO15047 1707 aaKnown RBP23.55■■□□□ 1.36
GCDH-201ENST00000222214 WDR43Q15061 677 aaKnown RBP eCLIP23.54■■□□□ 1.36
GCDH-201ENST00000222214 ATAD2Q6PL18 1390 aa23.54■■□□□ 1.36
GCDH-201ENST00000222214 BCANQ96GW7 911 aa23.54■■□□□ 1.36
GCDH-201ENST00000222214 SLC12A5Q9H2X9 1139 aa23.54■■□□□ 1.36
GCDH-201ENST00000222214 STK26Q9P289 416 aa23.54■■□□□ 1.36
GCDH-201ENST00000222214 NSD2O96028 1365 aa23.53■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms