RNA–Protein interactions for RNA: ENST00000221554.12

CCDC130-201, Transcript of coiled-coil domain containing 130, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC130, Length 1,792 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-201ENST00000221554 SCAF11Q99590 1463 aaKnown RBP28.21■■■□□ 2.11
CCDC130-201ENST00000221554 PANK3Q9H999 370 aa28.2■■■□□ 2.11
CCDC130-201ENST00000221554 EIF3AQ14152 1382 aaKnown RBP28.19■■■□□ 2.1
CCDC130-201ENST00000221554 KIF3BO15066 747 aa28.17■■■□□ 2.1
CCDC130-201ENST00000221554 CFAP74Q9C0B2 1584 aa28.14■■■□□ 2.1
CCDC130-201ENST00000221554 MYT1LQ9UL68 1186 aa28.14■■■□□ 2.1
CCDC130-201ENST00000221554 ZNF518AQ6AHZ1 1483 aa28.13■■■□□ 2.09
CCDC130-201ENST00000221554 LMTK2Q8IWU2 1503 aa28.13■■■□□ 2.09
CCDC130-201ENST00000221554 MYOM2P54296 1465 aa28.13■■■□□ 2.09
CCDC130-201ENST00000221554 FANCIQ9NVI1 1328 aa28.13■■■□□ 2.09
CCDC130-201ENST00000221554 ANP32EQ9BTT0 268 aa28.11■■■□□ 2.09
CCDC130-201ENST00000221554 MROH1Q8NDA8 1641 aa28.11■■■□□ 2.09
CCDC130-201ENST00000221554 SYNMO15061 1565 aa28.1■■■□□ 2.09
CCDC130-201ENST00000221554 NEO1Q92859 1461 aa28.1■■■□□ 2.09
CCDC130-201ENST00000221554 B4GALNT3Q6L9W6 998 aa28.1■■■□□ 2.09
CCDC130-201ENST00000221554 EFCAB6Q5THR3 1501 aa28.08■■■□□ 2.09
CCDC130-201ENST00000221554 KNSTRNQ9Y448 316 aa28.08■■■□□ 2.09
CCDC130-201ENST00000221554 BLMP54132 1417 aaPredicted RBP28.07■■■□□ 2.08
CCDC130-201ENST00000221554 CC2D1BQ5T0F9 858 aaKnown RBP28.07■■■□□ 2.08
CCDC130-201ENST00000221554 KIDINS220Q9ULH0 1771 aa28.07■■■□□ 2.08
CCDC130-201ENST00000221554 NPC1L1Q9UHC9 1359 aa28.06■■■□□ 2.08
CCDC130-201ENST00000221554 KIF1BO60333 1816 aa28.06■■■□□ 2.08
CCDC130-201ENST00000221554 RICTORQ6R327 1708 aa28.03■■■□□ 2.08
CCDC130-201ENST00000221554 CCDC136Q96JN2 1154 aa28.02■■■□□ 2.08
CCDC130-201ENST00000221554 MLH3Q9UHC1 1453 aa28.01■■■□□ 2.07
CCDC130-201ENST00000221554 RCAN3Q9UKA8 241 aa27.99■■■□□ 2.07
CCDC130-201ENST00000221554 FRMPD1Q5SYB0 1578 aa27.99■■■□□ 2.07
CCDC130-201ENST00000221554 ASXL1Q8IXJ9 1541 aa27.98■■■□□ 2.07
CCDC130-201ENST00000221554 RRP1P56182 461 aaKnown RBP27.98■■■□□ 2.07
CCDC130-201ENST00000221554 POGZQ7Z3K3 1410 aa27.97■■■□□ 2.07
CCDC130-201ENST00000221554 IFT172Q9UG01 1749 aa27.97■■■□□ 2.07
CCDC130-201ENST00000221554 KDM5AP29375 1690 aaKnown RBP27.97■■■□□ 2.07
CCDC130-201ENST00000221554 NRXN1Q9ULB1 1477 aa27.97■■■□□ 2.07
CCDC130-201ENST00000221554 RAPGEF3O95398 923 aa27.96■■■□□ 2.07
CCDC130-201ENST00000221554 AMER1Q5JTC6 1135 aaPredicted RBP27.96■■■□□ 2.07
CCDC130-201ENST00000221554 PIK3C2GO75747 1445 aa27.94■■■□□ 2.06
CCDC130-201ENST00000221554 SBNO2Q9Y2G9 1366 aa27.93■■■□□ 2.06
CCDC130-201ENST00000221554 PPP2R1AP30153 589 aa27.93■■■□□ 2.06
CCDC130-201ENST00000221554 ABCA6Q8N139 1617 aa27.93■■■□□ 2.06
CCDC130-201ENST00000221554 SETBP1Q9Y6X0 1596 aa27.91■■■□□ 2.06
CCDC130-201ENST00000221554 HECW2Q9P2P5 1572 aa27.91■■■□□ 2.06
CCDC130-201ENST00000221554 ADGRB3O60242 1522 aa27.9■■■□□ 2.06
CCDC130-201ENST00000221554 RPGRIP1LQ68CZ1 1315 aa27.9■■■□□ 2.06
CCDC130-201ENST00000221554 MYO3AQ8NEV4 1616 aa27.89■■■□□ 2.06
CCDC130-201ENST00000221554 WDR43Q15061 677 aaKnown RBP eCLIP27.89■■■□□ 2.06
CCDC130-201ENST00000221554 MYOM1P52179 1685 aa27.89■■■□□ 2.06
CCDC130-201ENST00000221554 CFAP70Q5T0N1 1121 aa27.88■■■□□ 2.05
CCDC130-201ENST00000221554 ADGRF5Q8IZF2 1346 aa27.87■■■□□ 2.05
CCDC130-201ENST00000221554 UGGT1Q9NYU2 1555 aa27.86■■■□□ 2.05
CCDC130-201ENST00000221554 ADAMTS8Q9UP79 889 aa27.84■■■□□ 2.05
CCDC130-201ENST00000221554 ERVK-7P63135 1459 aa27.84■■■□□ 2.05
CCDC130-201ENST00000221554 MROH2AA6NES4 1674 aa27.83■■■□□ 2.05
CCDC130-201ENST00000221554 SALL2Q9Y467 1007 aaPredicted RBP27.82■■■□□ 2.04
CCDC130-201ENST00000221554 SENP3-EIF4A1A0A087X0R7 540 aa27.81■■■□□ 2.04
CCDC130-201ENST00000221554 NPATQ14207 1427 aa27.81■■■□□ 2.04
CCDC130-201ENST00000221554 NGEFQ8N5V2 710 aa27.81■■■□□ 2.04
CCDC130-201ENST00000221554 NOS1P29475 1434 aa27.78■■■□□ 2.04
CCDC130-201ENST00000221554 CDCA7LQ96GN5 454 aa27.78■■■□□ 2.04
CCDC130-201ENST00000221554 C14orf93Q9H972 538 aaKnown RBP27.78■■■□□ 2.04
CCDC130-201ENST00000221554 PPLO60437 1756 aa27.77■■■□□ 2.04
CCDC130-201ENST00000221554 CENPJQ9HC77 1338 aaPredicted RBP27.77■■■□□ 2.04
CCDC130-201ENST00000221554 ABCC3O15438 1527 aa27.76■■■□□ 2.04
CCDC130-201ENST00000221554 GGT6Q6P531 493 aa27.74■■■□□ 2.03
CCDC130-201ENST00000221554 YEATS2Q9ULM3 1422 aa27.74■■■□□ 2.03
CCDC130-201ENST00000221554 MSH5O43196 834 aa27.73■■■□□ 2.03
CCDC130-201ENST00000221554 ERICH6Q7L0X2 663 aa27.73■■■□□ 2.03
CCDC130-201ENST00000221554 EXOC6Q8TAG9 804 aa27.73■■■□□ 2.03
CCDC130-201ENST00000221554 PUS7Q96PZ0 661 aaKnown RBP27.73■■■□□ 2.03
CCDC130-201ENST00000221554 ARHGAP31Q2M1Z3 1444 aa27.71■■■□□ 2.03
CCDC130-201ENST00000221554 CHGAP10645 457 aaKnown RBP27.71■■■□□ 2.03
CCDC130-201ENST00000221554 CAMSAP1Q5T5Y3 1602 aa27.71■■■□□ 2.03
CCDC130-201ENST00000221554 ZNF521Q96K83 1311 aa27.7■■■□□ 2.03
CCDC130-201ENST00000221554 GOLGA2Q08379 1002 aa27.7■■■□□ 2.02
CCDC130-201ENST00000221554 TCERG1O14776 1098 aaKnown RBP27.69■■■□□ 2.02
CCDC130-201ENST00000221554 SIGLEC1Q9BZZ2 1709 aa27.69■■■□□ 2.02
CCDC130-201ENST00000221554 ARHGEF40Q8TER5 1519 aa27.69■■■□□ 2.02
CCDC130-201ENST00000221554 ZC3H13Q5T200 1668 aaKnown RBP27.68■■■□□ 2.02
CCDC130-201ENST00000221554 DIP2CQ9Y2E4 1556 aa27.68■■■□□ 2.02
CCDC130-201ENST00000221554 VGFO15240 615 aaPredicted RBP27.68■■■□□ 2.02
CCDC130-201ENST00000221554 ADGRB1O14514 1584 aa27.67■■■□□ 2.02
CCDC130-201ENST00000221554 GOLGA6L2Q8N9W4 650 aaPredicted RBP27.66■■■□□ 2.02
CCDC130-201ENST00000221554 PIK3C2BO00750 1634 aa27.66■■■□□ 2.02
CCDC130-201ENST00000221554 CARD14Q9BXL6 1004 aa27.65■■■□□ 2.02
CCDC130-201ENST00000221554 POLR3AO14802 1390 aaPredicted RBP27.64■■■□□ 2.02
CCDC130-201ENST00000221554 PLEKHH1Q9ULM0 1364 aa27.64■■■□□ 2.02
CCDC130-201ENST00000221554 DUSP27Q5VZP5 1158 aa27.64■■■□□ 2.02
CCDC130-201ENST00000221554 MS4A1P11836 297 aa27.63■■■□□ 2.01
CCDC130-201ENST00000221554 QRICH2Q9H0J4 1663 aa27.63■■■□□ 2.01
CCDC130-201ENST00000221554 SLFN5Q08AF3 891 aa27.6■■■□□ 2.01
CCDC130-201ENST00000221554 ZFYVE9O95405 1425 aa27.6■■■□□ 2.01
CCDC130-201ENST00000221554 TRMT2AQ8IZ69 625 aaKnown RBP27.6■■■□□ 2.01
CCDC130-201ENST00000221554 SLC52A1Q9NWF4 448 aa27.6■■■□□ 2.01
CCDC130-201ENST00000221554 TRAK1Q9UPV9 953 aa27.6■■■□□ 2.01
CCDC130-201ENST00000221554 USP32Q8NFA0 1604 aa27.59■■■□□ 2.01
CCDC130-201ENST00000221554 ANP32AP39687 249 aaKnown RBP27.58■■■□□ 2.01
CCDC130-201ENST00000221554 NEXMIFQ5QGS0 1516 aa27.55■■■□□ 2
CCDC130-201ENST00000221554 CFAP65Q6ZU64 1925 aaKnown RBP27.55■■■□□ 2
CCDC130-201ENST00000221554 EVC2Q86UK5 1308 aa27.55■■■□□ 2
CCDC130-201ENST00000221554 E9PSI1 815 aa27.55■■■□□ 2
CCDC130-201ENST00000221554 CRBNQ96SW2 442 aa27.54■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms