RNA–Protein interactions for RNA: ENST00000220659.10

BRF2-201, Transcript of BRF2, RNA polymerase III transcription initiation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRF2, Length 2,603 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2-201ENST00000220659 DISP3Q9P2K9 1392 aa17.25■□□□□ 0.35
BRF2-201ENST00000220659 SIGLEC1Q9BZZ2 1709 aa17.25■□□□□ 0.35
BRF2-201ENST00000220659 TMF1P82094 1093 aa17.25■□□□□ 0.35
BRF2-201ENST00000220659 SUPT16HQ9Y5B9 1047 aaKnown RBP17.25■□□□□ 0.35
BRF2-201ENST00000220659 RPGRIP1LQ68CZ1 1315 aa17.24■□□□□ 0.35
BRF2-201ENST00000220659 AGLP35573 1532 aa17.23■□□□□ 0.35
BRF2-201ENST00000220659 MRS2Q9HD23 443 aa17.23■□□□□ 0.35
BRF2-201ENST00000220659 ADGRF5Q8IZF2 1346 aa17.23■□□□□ 0.35
BRF2-201ENST00000220659 SYNMO15061 1565 aa17.23■□□□□ 0.35
BRF2-201ENST00000220659 TRHP20396 242 aaPredicted RBP17.23■□□□□ 0.35
BRF2-201ENST00000220659 KIF13AQ9H1H9 1805 aa17.23■□□□□ 0.35
BRF2-201ENST00000220659 PPLO60437 1756 aa17.22■□□□□ 0.35
BRF2-201ENST00000220659 DNAJC5Q9H3Z4 198 aa17.22■□□□□ 0.35
BRF2-201ENST00000220659 CFAP65Q6ZU64 1925 aaKnown RBP17.21■□□□□ 0.35
BRF2-201ENST00000220659 EIF3AQ14152 1382 aaKnown RBP17.21■□□□□ 0.35
BRF2-201ENST00000220659 CNGB1Q14028 1251 aaPredicted RBP17.2■□□□□ 0.34
BRF2-201ENST00000220659 SETBP1Q9Y6X0 1596 aa17.2■□□□□ 0.34
BRF2-201ENST00000220659 RALBP1Q15311 655 aa17.2■□□□□ 0.34
BRF2-201ENST00000220659 PPP6R1Q9UPN7 881 aa17.2■□□□□ 0.34
BRF2-201ENST00000220659 PER1O15534 1290 aaPredicted RBP17.19■□□□□ 0.34
BRF2-201ENST00000220659 CFAP70Q5T0N1 1121 aa17.18■□□□□ 0.34
BRF2-201ENST00000220659 PIK3C2GO75747 1445 aa17.18■□□□□ 0.34
BRF2-201ENST00000220659 HNRNPUQ00839 825 aaKnown RBP eCLIP17.18■□□□□ 0.34
BRF2-201ENST00000220659 SLC24A1O60721 1099 aa17.17■□□□□ 0.34
BRF2-201ENST00000220659 CDCA8Q53HL2 280 aa17.17■□□□□ 0.34
BRF2-201ENST00000220659 SLC52A1Q9NWF4 448 aa17.17■□□□□ 0.34
BRF2-201ENST00000220659 SENP3Q9H4L4 574 aaPredicted RBP17.17■□□□□ 0.34
BRF2-201ENST00000220659 PREX1Q8TCU6 1659 aa17.16■□□□□ 0.34
BRF2-201ENST00000220659 PARD3Q8TEW0 1356 aa17.16■□□□□ 0.34
BRF2-201ENST00000220659 MYO3AQ8NEV4 1616 aa17.15■□□□□ 0.34
BRF2-201ENST00000220659 CHGAP10645 457 aaKnown RBP17.15■□□□□ 0.34
BRF2-201ENST00000220659 C14orf93Q9H972 538 aaKnown RBP17.15■□□□□ 0.34
BRF2-201ENST00000220659 MYBBP1AQ9BQG0 1328 aaKnown RBP17.15■□□□□ 0.34
BRF2-201ENST00000220659 NEXMIFQ5QGS0 1516 aa17.14■□□□□ 0.33
BRF2-201ENST00000220659 BRD4O60885 1362 aaPredicted RBP17.14■□□□□ 0.33
BRF2-201ENST00000220659 ARHGEF40Q8TER5 1519 aa17.14■□□□□ 0.33
BRF2-201ENST00000220659 FAM9BQ8IZU0 186 aa17.14■□□□□ 0.33
BRF2-201ENST00000220659 ZFYVE9O95405 1425 aa17.13■□□□□ 0.33
BRF2-201ENST00000220659 SBNO2Q9Y2G9 1366 aa17.13■□□□□ 0.33
BRF2-201ENST00000220659 ADGRB1O14514 1584 aa17.13■□□□□ 0.33
BRF2-201ENST00000220659 PANK3Q9H999 370 aa17.13■□□□□ 0.33
BRF2-201ENST00000220659 IDI1Q13907 227 aa17.12■□□□□ 0.33
BRF2-201ENST00000220659 MLECQ14165 292 aa17.11■□□□□ 0.33
BRF2-201ENST00000220659 VGFO15240 615 aaPredicted RBP17.1■□□□□ 0.33
BRF2-201ENST00000220659 PNISRQ8TF01 805 aaKnown RBP17.1■□□□□ 0.33
BRF2-201ENST00000220659 ZBED9Q6R2W3 1325 aa17.1■□□□□ 0.33
BRF2-201ENST00000220659 ERVK-7P63135 1459 aa17.1■□□□□ 0.33
BRF2-201ENST00000220659 TMEM131LA2VDJ0 1609 aa17.1■□□□□ 0.33
BRF2-201ENST00000220659 KDM5AP29375 1690 aaKnown RBP17.08■□□□□ 0.33
BRF2-201ENST00000220659 TMC1Q8TDI8 760 aa17.08■□□□□ 0.33
BRF2-201ENST00000220659 MYOM1P52179 1685 aa17.08■□□□□ 0.32
BRF2-201ENST00000220659 LRPPRCP42704 1394 aaKnown RBP17.07■□□□□ 0.32
BRF2-201ENST00000220659 NLRP13Q86W25 1043 aa17.07■□□□□ 0.32
BRF2-201ENST00000220659 NUTM2DQ5VT03 806 aaPredicted RBP17.07■□□□□ 0.32
BRF2-201ENST00000220659 CLTCQ00610 1675 aaKnown RBP17.06■□□□□ 0.32
BRF2-201ENST00000220659 CENPJQ9HC77 1338 aaPredicted RBP17.05■□□□□ 0.32
BRF2-201ENST00000220659 SPATA31D1Q6ZQQ2 1576 aa17.05■□□□□ 0.32
BRF2-201ENST00000220659 MYO5BQ9ULV0 1848 aa17.04■□□□□ 0.32
BRF2-201ENST00000220659 FBXO31Q5XUX0 539 aaPredicted RBP17.03■□□□□ 0.32
BRF2-201ENST00000220659 NPC1L1Q9UHC9 1359 aa17.03■□□□□ 0.32
BRF2-201ENST00000220659 AMER1Q5JTC6 1135 aaPredicted RBP17.01■□□□□ 0.31
BRF2-201ENST00000220659 KNSTRNQ9Y448 316 aa17.01■□□□□ 0.31
BRF2-201ENST00000220659 QRICH2Q9H0J4 1663 aa17.01■□□□□ 0.31
BRF2-201ENST00000220659 ASXL1Q8IXJ9 1541 aa17.01■□□□□ 0.31
BRF2-201ENST00000220659 INSRP06213 1382 aa17.01■□□□□ 0.31
BRF2-201ENST00000220659 CC2D1BQ5T0F9 858 aaKnown RBP17■□□□□ 0.31
BRF2-201ENST00000220659 TSHZ2Q9NRE2 1034 aa17■□□□□ 0.31
BRF2-201ENST00000220659 TRAK1Q9UPV9 953 aa17■□□□□ 0.31
BRF2-201ENST00000220659 TMEM132EQ6IEE7 984 aa17■□□□□ 0.31
BRF2-201ENST00000220659 PUS7Q96PZ0 661 aaKnown RBP16.99■□□□□ 0.31
BRF2-201ENST00000220659 ARHGEF28Q8N1W1 1705 aaKnown RBP16.98■□□□□ 0.31
BRF2-201ENST00000220659 NEFLP07196 543 aa16.98■□□□□ 0.31
BRF2-201ENST00000220659 FKBP8Q14318 412 aa16.97■□□□□ 0.31
BRF2-201ENST00000220659 PLPPR3Q6T4P5 718 aa16.97■□□□□ 0.31
BRF2-201ENST00000220659 A2ML1A8K2U0 1454 aa16.96■□□□□ 0.31
BRF2-201ENST00000220659 ZMYM3Q14202 1370 aa16.95■□□□□ 0.3
BRF2-201ENST00000220659 SMG6Q86US8 1419 aaKnown RBP16.94■□□□□ 0.3
BRF2-201ENST00000220659 ALKQ9UM73 1620 aa16.92■□□□□ 0.3
BRF2-201ENST00000220659 PPP2R1AP30153 589 aa16.92■□□□□ 0.3
BRF2-201ENST00000220659 CARD14Q9BXL6 1004 aa16.91■□□□□ 0.3
BRF2-201ENST00000220659 STAG3Q9UJ98 1225 aa16.91■□□□□ 0.3
BRF2-201ENST00000220659 TULP4Q9NRJ4 1543 aa16.91■□□□□ 0.3
BRF2-201ENST00000220659 BLMP54132 1417 aaPredicted RBP16.91■□□□□ 0.3
BRF2-201ENST00000220659 ESF1Q9H501 851 aaKnown RBP16.9■□□□□ 0.3
BRF2-201ENST00000220659 RIMS2Q9UQ26 1411 aa16.9■□□□□ 0.3
BRF2-201ENST00000220659 EVC2Q86UK5 1308 aa16.9■□□□□ 0.3
BRF2-201ENST00000220659 PTPRMP28827 1452 aa16.9■□□□□ 0.3
BRF2-201ENST00000220659 YTHDC2Q9H6S0 1430 aaKnown RBP16.9■□□□□ 0.3
BRF2-201ENST00000220659 NUDCQ9Y266 331 aa16.87■□□□□ 0.29
BRF2-201ENST00000220659 USP32Q8NFA0 1604 aa16.87■□□□□ 0.29
BRF2-201ENST00000220659 SENP3-EIF4A1A0A087X0R7 540 aa16.87■□□□□ 0.29
BRF2-201ENST00000220659 ERICH6BQ5W0A0 696 aa16.87■□□□□ 0.29
BRF2-201ENST00000220659 SETD1AO15047 1707 aaKnown RBP16.86■□□□□ 0.29
BRF2-201ENST00000220659 TNRQ92752 1358 aa16.86■□□□□ 0.29
BRF2-201ENST00000220659 DLC1Q96QB1 1528 aa16.86■□□□□ 0.29
BRF2-201ENST00000220659 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.85■□□□□ 0.29
BRF2-201ENST00000220659 CEBPAP49715 358 aaPredicted RBP16.85■□□□□ 0.29
BRF2-201ENST00000220659 NINLQ9Y2I6 1382 aa16.85■□□□□ 0.29
BRF2-201ENST00000220659 SLC12A5Q9H2X9 1139 aa16.84■□□□□ 0.29
BRF2-201ENST00000220659 NSD3Q9BZ95 1437 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms