RNA–Protein interactions for RNA: ENST00000216083.6

CBX6-201, Transcript of chromobox 6, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CBX6, Length 3,191 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX6-201ENST00000216083 ANP32CO43423 234 aa20.26■□□□□ 0.83
CBX6-201ENST00000216083 GPRASP1Q5JY77 1395 aa20.23■□□□□ 0.83
CBX6-201ENST00000216083 AGLP35573 1532 aa20.23■□□□□ 0.83
CBX6-201ENST00000216083 ARHGAP31Q2M1Z3 1444 aa20.23■□□□□ 0.83
CBX6-201ENST00000216083 ZC3H13Q5T200 1668 aaKnown RBP20.22■□□□□ 0.83
CBX6-201ENST00000216083 CLTCQ00610 1675 aaKnown RBP20.22■□□□□ 0.83
CBX6-201ENST00000216083 REREQ9P2R6 1566 aa20.22■□□□□ 0.83
CBX6-201ENST00000216083 ADGRB3O60242 1522 aa20.22■□□□□ 0.83
CBX6-201ENST00000216083 PRKCSHP14314 528 aaPredicted RBP20.22■□□□□ 0.83
CBX6-201ENST00000216083 PLPPR3Q6T4P5 718 aa20.19■□□□□ 0.82
CBX6-201ENST00000216083 ESF1Q9H501 851 aaKnown RBP20.19■□□□□ 0.82
CBX6-201ENST00000216083 PREX1Q8TCU6 1659 aa20.18■□□□□ 0.82
CBX6-201ENST00000216083 TESK2Q96S53 571 aa20.17■□□□□ 0.82
CBX6-201ENST00000216083 FKBP8Q14318 412 aa20.16■□□□□ 0.82
CBX6-201ENST00000216083 PIK3C2BO00750 1634 aa20.16■□□□□ 0.82
CBX6-201ENST00000216083 SLC52A1Q9NWF4 448 aa20.16■□□□□ 0.82
CBX6-201ENST00000216083 TMEM132EQ6IEE7 984 aa20.15■□□□□ 0.82
CBX6-201ENST00000216083 IFT172Q9UG01 1749 aa20.15■□□□□ 0.82
CBX6-201ENST00000216083 POLR1AO95602 1720 aaPredicted RBP20.15■□□□□ 0.82
CBX6-201ENST00000216083 ERVK-7P63135 1459 aa20.15■□□□□ 0.82
CBX6-201ENST00000216083 STAC3Q96MF2 364 aa20.14■□□□□ 0.82
CBX6-201ENST00000216083 NEURL4Q96JN8 1562 aa20.14■□□□□ 0.81
CBX6-201ENST00000216083 DISP3Q9P2K9 1392 aa20.14■□□□□ 0.81
CBX6-201ENST00000216083 MYOM2P54296 1465 aa20.14■□□□□ 0.81
CBX6-201ENST00000216083 STAG3Q9UJ98 1225 aa20.14■□□□□ 0.81
CBX6-201ENST00000216083 MYO5BQ9ULV0 1848 aa20.13■□□□□ 0.81
CBX6-201ENST00000216083 ZMYM3Q14202 1370 aa20.13■□□□□ 0.81
CBX6-201ENST00000216083 PPP6R1Q9UPN7 881 aa20.12■□□□□ 0.81
CBX6-201ENST00000216083 CEBPAP49715 358 aaPredicted RBP20.11■□□□□ 0.81
CBX6-201ENST00000216083 PPLO60437 1756 aa20.11■□□□□ 0.81
CBX6-201ENST00000216083 LAMC1P11047 1609 aa20.11■□□□□ 0.81
CBX6-201ENST00000216083 SCAF11Q99590 1463 aaKnown RBP20.09■□□□□ 0.81
CBX6-201ENST00000216083 TRAK1Q9UPV9 953 aa20.09■□□□□ 0.81
CBX6-201ENST00000216083 NRXN1Q9ULB1 1477 aa20.08■□□□□ 0.81
CBX6-201ENST00000216083 CCDC184Q52MB2 194 aa20.08■□□□□ 0.81
CBX6-201ENST00000216083 PIK3C2GO75747 1445 aa20.08■□□□□ 0.81
CBX6-201ENST00000216083 NEXMIFQ5QGS0 1516 aa20.08■□□□□ 0.81
CBX6-201ENST00000216083 RPGRIP1LQ68CZ1 1315 aa20.08■□□□□ 0.8
CBX6-201ENST00000216083 IQGAP1P46940 1657 aa20.07■□□□□ 0.8
CBX6-201ENST00000216083 PRKRIP1Q9H875 184 aaPredicted RBP20.07■□□□□ 0.8
CBX6-201ENST00000216083 TMEM131LA2VDJ0 1609 aa20.07■□□□□ 0.8
CBX6-201ENST00000216083 VGFO15240 615 aaPredicted RBP20.07■□□□□ 0.8
CBX6-201ENST00000216083 C14orf93Q9H972 538 aaKnown RBP20.07■□□□□ 0.8
CBX6-201ENST00000216083 TMF1P82094 1093 aa20.06■□□□□ 0.8
CBX6-201ENST00000216083 RBM19Q9Y4C8 960 aaKnown RBP20.05■□□□□ 0.8
CBX6-201ENST00000216083 CCER2I3L3R5 266 aa20.04■□□□□ 0.8
CBX6-201ENST00000216083 SPATA31D1Q6ZQQ2 1576 aa20.03■□□□□ 0.8
CBX6-201ENST00000216083 KIAA1210Q9ULL0 1709 aa20.03■□□□□ 0.8
CBX6-201ENST00000216083 STK26Q9P289 416 aa20.01■□□□□ 0.79
CBX6-201ENST00000216083 SAFB2Q14151 953 aaKnown RBP eCLIP20■□□□□ 0.79
CBX6-201ENST00000216083 A2ML1A8K2U0 1454 aa19.99■□□□□ 0.79
CBX6-201ENST00000216083 EIF3AQ14152 1382 aaKnown RBP19.99■□□□□ 0.79
CBX6-201ENST00000216083 ADGRB1O14514 1584 aa19.98■□□□□ 0.79
CBX6-201ENST00000216083 PANK3Q9H999 370 aa19.98■□□□□ 0.79
CBX6-201ENST00000216083 TNRQ92752 1358 aa19.97■□□□□ 0.79
CBX6-201ENST00000216083 CENPJQ9HC77 1338 aaPredicted RBP19.95■□□□□ 0.78
CBX6-201ENST00000216083 MRS2Q9HD23 443 aa19.94■□□□□ 0.78
CBX6-201ENST00000216083 RIMS2Q9UQ26 1411 aa19.94■□□□□ 0.78
CBX6-201ENST00000216083 MSH5O43196 834 aa19.93■□□□□ 0.78
CBX6-201ENST00000216083 SETBP1Q9Y6X0 1596 aa19.93■□□□□ 0.78
CBX6-201ENST00000216083 CC2D1BQ5T0F9 858 aaKnown RBP19.92■□□□□ 0.78
CBX6-201ENST00000216083 ZFYVE9O95405 1425 aa19.92■□□□□ 0.78
CBX6-201ENST00000216083 PER1O15534 1290 aaPredicted RBP19.92■□□□□ 0.78
CBX6-201ENST00000216083 FAM9BQ8IZU0 186 aa19.91■□□□□ 0.78
CBX6-201ENST00000216083 ASXL1Q8IXJ9 1541 aa19.91■□□□□ 0.78
CBX6-201ENST00000216083 FER1L4A9Z1Z3 1794 aa19.89■□□□□ 0.77
CBX6-201ENST00000216083 C3P01024 1663 aa19.87■□□□□ 0.77
CBX6-201ENST00000216083 CDCA8Q53HL2 280 aa19.87■□□□□ 0.77
CBX6-201ENST00000216083 NEFLP07196 543 aa19.86■□□□□ 0.77
CBX6-201ENST00000216083 ALKQ9UM73 1620 aa19.86■□□□□ 0.77
CBX6-201ENST00000216083 SENP3-EIF4A1A0A087X0R7 540 aa19.86■□□□□ 0.77
CBX6-201ENST00000216083 IRX6P78412 446 aaPredicted RBP19.85■□□□□ 0.77
CBX6-201ENST00000216083 PRAM1Q96QH2 718 aa19.85■□□□□ 0.77
CBX6-201ENST00000216083 QRICH2Q9H0J4 1663 aa19.85■□□□□ 0.77
CBX6-201ENST00000216083 TMC1Q8TDI8 760 aa19.85■□□□□ 0.77
CBX6-201ENST00000216083 PTPRMP28827 1452 aa19.84■□□□□ 0.77
CBX6-201ENST00000216083 LTKP29376 864 aa19.84■□□□□ 0.77
CBX6-201ENST00000216083 ERICH6Q7L0X2 663 aa19.84■□□□□ 0.77
CBX6-201ENST00000216083 MINK1Q8N4C8 1332 aaPredicted RBP19.84■□□□□ 0.77
CBX6-201ENST00000216083 YTHDC2Q9H6S0 1430 aaKnown RBP19.83■□□□□ 0.77
CBX6-201ENST00000216083 ARHGEF28Q8N1W1 1705 aaKnown RBP19.83■□□□□ 0.77
CBX6-201ENST00000216083 MYO3AQ8NEV4 1616 aa19.83■□□□□ 0.76
CBX6-201ENST00000216083 HNRNPUQ00839 825 aaKnown RBP eCLIP19.83■□□□□ 0.76
CBX6-201ENST00000216083 POGKQ9P215 609 aa19.83■□□□□ 0.76
CBX6-201ENST00000216083 TMEM2Q9UHN6 1383 aa19.82■□□□□ 0.76
CBX6-201ENST00000216083 WAPLQ7Z5K2 1190 aa19.82■□□□□ 0.76
CBX6-201ENST00000216083 CABP2Q9NPB3 220 aa19.82■□□□□ 0.76
CBX6-201ENST00000216083 SLC12A5Q9H2X9 1139 aa19.82■□□□□ 0.76
CBX6-201ENST00000216083 KDM5AP29375 1690 aaKnown RBP19.82■□□□□ 0.76
CBX6-201ENST00000216083 UBR1Q8IWV7 1749 aa19.82■□□□□ 0.76
CBX6-201ENST00000216083 KTN1Q86UP2 1357 aaKnown RBP19.81■□□□□ 0.76
CBX6-201ENST00000216083 MYOM1P52179 1685 aa19.81■□□□□ 0.76
CBX6-201ENST00000216083 KNSTRNQ9Y448 316 aa19.81■□□□□ 0.76
CBX6-201ENST00000216083 METP08581 1390 aa19.8■□□□□ 0.76
CBX6-201ENST00000216083 SBNO2Q9Y2G9 1366 aa19.8■□□□□ 0.76
CBX6-201ENST00000216083 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.8■□□□□ 0.76
CBX6-201ENST00000216083 TXNDC2Q86VQ3 553 aa19.79■□□□□ 0.76
CBX6-201ENST00000216083 CARD14Q9BXL6 1004 aa19.78■□□□□ 0.76
CBX6-201ENST00000216083 RALBP1Q15311 655 aa19.78■□□□□ 0.76
CBX6-201ENST00000216083 SLC26A8Q96RN1 970 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms