RNA–Protein interactions for RNA: ENST00000216038.5

RTCB-201, Transcript of RNA 2',3'-cyclic phosphate and 5'-OH ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTCB, Length 2,027 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCB-201ENST00000216038 IFT172Q9UG01 1749 aa14.2□□□□□ -0.14
RTCB-201ENST00000216038 ADGRF5Q8IZF2 1346 aa14.2□□□□□ -0.14
RTCB-201ENST00000216038 CEP170BQ9Y4F5 1589 aaPredicted RBP14.19□□□□□ -0.14
RTCB-201ENST00000216038 NEXMIFQ5QGS0 1516 aa14.19□□□□□ -0.14
RTCB-201ENST00000216038 RPGRIP1LQ68CZ1 1315 aa14.17□□□□□ -0.14
RTCB-201ENST00000216038 UHRF1BP1Q6BDS2 1440 aa14.16□□□□□ -0.14
RTCB-201ENST00000216038 PRAG1Q86YV5 1406 aa14.16□□□□□ -0.14
RTCB-201ENST00000216038 RIMS2Q9UQ26 1411 aa14.16□□□□□ -0.14
RTCB-201ENST00000216038 KDM5AP29375 1690 aaKnown RBP14.16□□□□□ -0.14
RTCB-201ENST00000216038 THEMISQ8N1K5 641 aaPredicted RBP14.15□□□□□ -0.14
RTCB-201ENST00000216038 TMEM2Q9UHN6 1383 aa14.15□□□□□ -0.14
RTCB-201ENST00000216038 ZNF142P52746 1687 aaPredicted RBP14.15□□□□□ -0.14
RTCB-201ENST00000216038 VGFO15240 615 aaPredicted RBP14.15□□□□□ -0.14
RTCB-201ENST00000216038 LTKP29376 864 aa14.14□□□□□ -0.15
RTCB-201ENST00000216038 NBPF1Q3BBV0 1214 aa14.14□□□□□ -0.15
RTCB-201ENST00000216038 ZFYVE9O95405 1425 aa14.14□□□□□ -0.15
RTCB-201ENST00000216038 CENPBP07199 599 aaPredicted RBP14.14□□□□□ -0.15
RTCB-201ENST00000216038 MYOM2P54296 1465 aa14.13□□□□□ -0.15
RTCB-201ENST00000216038 CFAP70Q5T0N1 1121 aa14.13□□□□□ -0.15
RTCB-201ENST00000216038 TXNDC2Q86VQ3 553 aa14.12□□□□□ -0.15
RTCB-201ENST00000216038 TRPM1Q7Z4N2 1603 aa14.12□□□□□ -0.15
RTCB-201ENST00000216038 BCANQ96GW7 911 aa14.12□□□□□ -0.15
RTCB-201ENST00000216038 STAC3Q96MF2 364 aa14.12□□□□□ -0.15
RTCB-201ENST00000216038 HSPA2P54652 639 aa14.11□□□□□ -0.15
RTCB-201ENST00000216038 NRXN1Q9ULB1 1477 aa14.11□□□□□ -0.15
RTCB-201ENST00000216038 PIK3C2GO75747 1445 aa14.11□□□□□ -0.15
RTCB-201ENST00000216038 ROCK2O75116 1388 aaKnown RBP14.11□□□□□ -0.15
RTCB-201ENST00000216038 HIRIP3Q9BW71 556 aaPredicted RBP14.1□□□□□ -0.15
RTCB-201ENST00000216038 EID1Q9Y6B2 187 aa14.1□□□□□ -0.15
RTCB-201ENST00000216038 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.1□□□□□ -0.15
RTCB-201ENST00000216038 SLIT1O75093 1534 aa14.1□□□□□ -0.15
RTCB-201ENST00000216038 HDGFP51858 240 aaKnown RBP14.09□□□□□ -0.15
RTCB-201ENST00000216038 ARHGAP23Q9P227 1491 aa14.09□□□□□ -0.15
RTCB-201ENST00000216038 RALGAPBQ86X10 1494 aa14.09□□□□□ -0.15
RTCB-201ENST00000216038 TMEM132EQ6IEE7 984 aa14.08□□□□□ -0.15
RTCB-201ENST00000216038 CARD11Q9BXL7 1154 aa14.08□□□□□ -0.15
RTCB-201ENST00000216038 LMTK3Q96Q04 1460 aa14.07□□□□□ -0.16
RTCB-201ENST00000216038 IQGAP1P46940 1657 aa14.07□□□□□ -0.16
RTCB-201ENST00000216038 ANKLE2Q86XL3 938 aa14.07□□□□□ -0.16
RTCB-201ENST00000216038 C14orf93Q9H972 538 aaKnown RBP14.07□□□□□ -0.16
RTCB-201ENST00000216038 SCAF11Q99590 1463 aaKnown RBP14.06□□□□□ -0.16
RTCB-201ENST00000216038 SLC26A8Q96RN1 970 aa14.06□□□□□ -0.16
RTCB-201ENST00000216038 NCKAP5LQ9HCH0 1330 aa14.06□□□□□ -0.16
RTCB-201ENST00000216038 NRXN3Q9Y4C0 1643 aa14.05□□□□□ -0.16
RTCB-201ENST00000216038 ALKQ9UM73 1620 aa14.05□□□□□ -0.16
RTCB-201ENST00000216038 GTF3C3Q9Y5Q9 886 aa14.05□□□□□ -0.16
RTCB-201ENST00000216038 KIAA1210Q9ULL0 1709 aa14.05□□□□□ -0.16
RTCB-201ENST00000216038 PLEKHG1Q9ULL1 1385 aa14.04□□□□□ -0.16
RTCB-201ENST00000216038 HSPA5P11021 654 aaKnown RBP14.03□□□□□ -0.16
RTCB-201ENST00000216038 STK26Q9P289 416 aa14.03□□□□□ -0.16
RTCB-201ENST00000216038 POLR1AO95602 1720 aaPredicted RBP14.03□□□□□ -0.16
RTCB-201ENST00000216038 USP47Q96K76 1375 aa14.02□□□□□ -0.16
RTCB-201ENST00000216038 SETBP1Q9Y6X0 1596 aa14.02□□□□□ -0.16
RTCB-201ENST00000216038 GPRASP1Q5JY77 1395 aa14.02□□□□□ -0.17
RTCB-201ENST00000216038 EIF4G2P78344 907 aaKnown RBP eCLIP14.02□□□□□ -0.17
RTCB-201ENST00000216038 TRAK1Q9UPV9 953 aa14.02□□□□□ -0.17
RTCB-201ENST00000216038 LAMC1P11047 1609 aa14.02□□□□□ -0.17
RTCB-201ENST00000216038 ASXL1Q8IXJ9 1541 aa14.01□□□□□ -0.17
RTCB-201ENST00000216038 SETD1AO15047 1707 aaKnown RBP14.01□□□□□ -0.17
RTCB-201ENST00000216038 METP08581 1390 aa14.01□□□□□ -0.17
RTCB-201ENST00000216038 ADGRB1O14514 1584 aa14.01□□□□□ -0.17
RTCB-201ENST00000216038 ADAMTS13Q76LX8 1427 aa14.01□□□□□ -0.17
RTCB-201ENST00000216038 ST20-MTHFSA0A0A6YYL1 179 aa13.99□□□□□ -0.17
RTCB-201ENST00000216038 NPHP4O75161 1426 aaPredicted RBP13.98□□□□□ -0.17
RTCB-201ENST00000216038 STRCQ7RTU9 1775 aa13.97□□□□□ -0.17
RTCB-201ENST00000216038 MED14O60244 1454 aa13.97□□□□□ -0.17
RTCB-201ENST00000216038 YTHDC2Q9H6S0 1430 aaKnown RBP13.97□□□□□ -0.17
RTCB-201ENST00000216038 SAFB2Q14151 953 aaKnown RBP eCLIP13.97□□□□□ -0.17
RTCB-201ENST00000216038 ZNF316A6NFI3 1004 aaPredicted RBP13.96□□□□□ -0.17
RTCB-201ENST00000216038 TBX22Q9Y458 520 aa13.96□□□□□ -0.17
RTCB-201ENST00000216038 AEBP2Q6ZN18 517 aaPredicted RBP13.95□□□□□ -0.18
RTCB-201ENST00000216038 PTPRUQ92729 1446 aa13.94□□□□□ -0.18
RTCB-201ENST00000216038 ARHGEF28Q8N1W1 1705 aaKnown RBP13.93□□□□□ -0.18
RTCB-201ENST00000216038 WAPLQ7Z5K2 1190 aa13.93□□□□□ -0.18
RTCB-201ENST00000216038 PRAM1Q96QH2 718 aa13.93□□□□□ -0.18
RTCB-201ENST00000216038 AMOTL2Q9Y2J4 779 aa13.93□□□□□ -0.18
RTCB-201ENST00000216038 DIP2AQ14689 1571 aa13.93□□□□□ -0.18
RTCB-201ENST00000216038 C11orf95C9JLR9 678 aaPredicted RBP13.92□□□□□ -0.18
RTCB-201ENST00000216038 LRPPRCP42704 1394 aaKnown RBP13.92□□□□□ -0.18
RTCB-201ENST00000216038 EIF3AQ14152 1382 aaKnown RBP13.92□□□□□ -0.18
RTCB-201ENST00000216038 TESK2Q96S53 571 aa13.91□□□□□ -0.18
RTCB-201ENST00000216038 POGKQ9P215 609 aa13.91□□□□□ -0.18
RTCB-201ENST00000216038 CENPJQ9HC77 1338 aaPredicted RBP13.9□□□□□ -0.18
RTCB-201ENST00000216038 KCNA6P17658 529 aa13.9□□□□□ -0.18
RTCB-201ENST00000216038 POLR3GLQ9BT43 218 aa13.9□□□□□ -0.18
RTCB-201ENST00000216038 ABCC11Q96J66 1382 aa13.9□□□□□ -0.18
RTCB-201ENST00000216038 PLEKHH1Q9ULM0 1364 aa13.9□□□□□ -0.18
RTCB-201ENST00000216038 CHD2O14647 1828 aaKnown RBP13.9□□□□□ -0.18
RTCB-201ENST00000216038 QRICH2Q9H0J4 1663 aa13.9□□□□□ -0.18
RTCB-201ENST00000216038 RBM33Q96EV2 1170 aaKnown RBP13.9□□□□□ -0.18
RTCB-201ENST00000216038 ROBO2Q9HCK4 1378 aa13.9□□□□□ -0.19
RTCB-201ENST00000216038 MINK1Q8N4C8 1332 aaPredicted RBP13.88□□□□□ -0.19
RTCB-201ENST00000216038 KNDC1Q76NI1 1749 aa13.87□□□□□ -0.19
RTCB-201ENST00000216038 DISP3Q9P2K9 1392 aa13.87□□□□□ -0.19
RTCB-201ENST00000216038 XRN1Q8IZH2 1706 aaKnown RBP13.87□□□□□ -0.19
RTCB-201ENST00000216038 WASHC2AQ641Q2 1341 aa13.86□□□□□ -0.19
RTCB-201ENST00000216038 CPS1P31327 1500 aa13.86□□□□□ -0.19
RTCB-201ENST00000216038 PIK3R4Q99570 1358 aa13.86□□□□□ -0.19
RTCB-201ENST00000216038 TECPR2O15040 1411 aa13.86□□□□□ -0.19
RTCB-201ENST00000216038 DLC1Q96QB1 1528 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms