RNA–Protein interactions for RNA: ENST00000187762.6

TMEM38A-201, Transcript of transmembrane protein 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM38A, Length 2,649 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM38A-201ENST00000187762 PER1O15534 1290 aaPredicted RBP19.23■□□□□ 0.67
TMEM38A-201ENST00000187762 C8orf34Q49A92 452 aa19.23■□□□□ 0.67
TMEM38A-201ENST00000187762 TESK2Q96S53 571 aa19.23■□□□□ 0.67
TMEM38A-201ENST00000187762 LAMC1P11047 1609 aa19.22■□□□□ 0.67
TMEM38A-201ENST00000187762 CC2D1BQ5T0F9 858 aaKnown RBP19.21■□□□□ 0.67
TMEM38A-201ENST00000187762 MAGI2Q86UL8 1455 aa19.21■□□□□ 0.67
TMEM38A-201ENST00000187762 NLRP13Q86W25 1043 aa19.21■□□□□ 0.67
TMEM38A-201ENST00000187762 CRBNQ96SW2 442 aa19.21■□□□□ 0.66
TMEM38A-201ENST00000187762 PLCH2O75038 1416 aa19.2■□□□□ 0.66
TMEM38A-201ENST00000187762 TRAPPC8Q9Y2L5 1435 aa19.2■□□□□ 0.66
TMEM38A-201ENST00000187762 ERBINQ96RT1 1412 aa19.2■□□□□ 0.66
TMEM38A-201ENST00000187762 EIF2AK4Q9P2K8 1649 aaKnown RBP19.19■□□□□ 0.66
TMEM38A-201ENST00000187762 SLC24A1O60721 1099 aa19.19■□□□□ 0.66
TMEM38A-201ENST00000187762 PLIN1O60240 522 aa19.19■□□□□ 0.66
TMEM38A-201ENST00000187762 ABCC1P33527 1531 aa19.18■□□□□ 0.66
TMEM38A-201ENST00000187762 KDM2BQ8NHM5 1336 aa19.18■□□□□ 0.66
TMEM38A-201ENST00000187762 PANK3Q9H999 370 aa19.18■□□□□ 0.66
TMEM38A-201ENST00000187762 XRCC6P12956 609 aaKnown RBP eCLIP19.17■□□□□ 0.66
TMEM38A-201ENST00000187762 EFCAB2Q5VUJ9 269 aa19.17■□□□□ 0.66
TMEM38A-201ENST00000187762 ATP10AO60312 1499 aa19.17■□□□□ 0.66
TMEM38A-201ENST00000187762 PDE3BQ13370 1112 aa19.16■□□□□ 0.66
TMEM38A-201ENST00000187762 RNF17Q9BXT8 1623 aaKnown RBP19.15■□□□□ 0.66
TMEM38A-201ENST00000187762 TMF1P82094 1093 aa19.13■□□□□ 0.65
TMEM38A-201ENST00000187762 ARXQ96QS3 562 aa19.13■□□□□ 0.65
TMEM38A-201ENST00000187762 RBM10P98175 930 aaKnown RBP19.13■□□□□ 0.65
TMEM38A-201ENST00000187762 AFAP1Q8N556 730 aa19.13■□□□□ 0.65
TMEM38A-201ENST00000187762 CDCA7LQ96GN5 454 aa19.13■□□□□ 0.65
TMEM38A-201ENST00000187762 CENPJQ9HC77 1338 aaPredicted RBP19.12■□□□□ 0.65
TMEM38A-201ENST00000187762 GOLGA6L3A6NEY3 463 aa19.12■□□□□ 0.65
TMEM38A-201ENST00000187762 CENPQQ7L2Z9 268 aaPredicted RBP19.12■□□□□ 0.65
TMEM38A-201ENST00000187762 PANK2Q9BZ23 570 aa19.11■□□□□ 0.65
TMEM38A-201ENST00000187762 FSD2A1L4K1 749 aa19.11■□□□□ 0.65
TMEM38A-201ENST00000187762 MADDQ8WXG6 1647 aa19.1■□□□□ 0.65
TMEM38A-201ENST00000187762 CLASP1Q7Z460 1538 aa19.1■□□□□ 0.65
TMEM38A-201ENST00000187762 A0A0U1RQG5 324 aaPredicted RBP19.1■□□□□ 0.65
TMEM38A-201ENST00000187762 SPAG9O60271 1321 aaKnown RBP19.1■□□□□ 0.65
TMEM38A-201ENST00000187762 PDCL3Q9H2J4 239 aa19.09■□□□□ 0.65
TMEM38A-201ENST00000187762 CALD1Q05682 793 aaKnown RBP19.09■□□□□ 0.65
TMEM38A-201ENST00000187762 PRDM4Q9UKN5 801 aa19.08■□□□□ 0.64
TMEM38A-201ENST00000187762 UHRF1BP1LA0JNW5 1464 aa19.08■□□□□ 0.64
TMEM38A-201ENST00000187762 ZFYVE16Q7Z3T8 1539 aa19.08■□□□□ 0.64
TMEM38A-201ENST00000187762 IQGAP1P46940 1657 aa19.07■□□□□ 0.64
TMEM38A-201ENST00000187762 SPHKAPQ2M3C7 1700 aa19.07■□□□□ 0.64
TMEM38A-201ENST00000187762 AAMPQ13685 434 aa19.06■□□□□ 0.64
TMEM38A-201ENST00000187762 CEP152O94986 1710 aa19.06■□□□□ 0.64
TMEM38A-201ENST00000187762 CLTCL1P53675 1640 aa19.06■□□□□ 0.64
TMEM38A-201ENST00000187762 TPM2P07951 284 aa19.05■□□□□ 0.64
TMEM38A-201ENST00000187762 BLMP54132 1417 aaPredicted RBP19.05■□□□□ 0.64
TMEM38A-201ENST00000187762 C20orf194Q5TEA3 1177 aa19.05■□□□□ 0.64
TMEM38A-201ENST00000187762 SLKQ9H2G2 1235 aaPredicted RBP19.05■□□□□ 0.64
TMEM38A-201ENST00000187762 TRPM2O94759 1503 aa19.05■□□□□ 0.64
TMEM38A-201ENST00000187762 WDR7Q9Y4E6 1490 aa19.05■□□□□ 0.64
TMEM38A-201ENST00000187762 USP19O94966 1318 aa19.03■□□□□ 0.64
TMEM38A-201ENST00000187762 ESPNB1AK53 854 aa19.03■□□□□ 0.64
TMEM38A-201ENST00000187762 RGS3P49796 1198 aa19.03■□□□□ 0.64
TMEM38A-201ENST00000187762 BECN1Q14457 450 aa19.02■□□□□ 0.64
TMEM38A-201ENST00000187762 DEPDC5O75140 1603 aa19.01■□□□□ 0.63
TMEM38A-201ENST00000187762 ANTXR1Q9H6X2 564 aa19.01■□□□□ 0.63
TMEM38A-201ENST00000187762 RTEL1-TNFRSF6BF6WH68 1400 aa19■□□□□ 0.63
TMEM38A-201ENST00000187762 ERBB4Q15303 1308 aa19■□□□□ 0.63
TMEM38A-201ENST00000187762 ADAMTS8Q9UP79 889 aa19■□□□□ 0.63
TMEM38A-201ENST00000187762 PTPRTO14522 1441 aa18.99■□□□□ 0.63
TMEM38A-201ENST00000187762 TET3O43151 1660 aa18.99■□□□□ 0.63
TMEM38A-201ENST00000187762 KNSTRNQ9Y448 316 aa18.99■□□□□ 0.63
TMEM38A-201ENST00000187762 SCAF11Q99590 1463 aaKnown RBP18.98■□□□□ 0.63
TMEM38A-201ENST00000187762 ATP7AQ04656 1500 aa18.98■□□□□ 0.63
TMEM38A-201ENST00000187762 ZMYM4Q5VZL5 1548 aa18.97■□□□□ 0.63
TMEM38A-201ENST00000187762 PPP2R1AP30153 589 aa18.97■□□□□ 0.63
TMEM38A-201ENST00000187762 MRE11P49959 708 aa18.97■□□□□ 0.63
TMEM38A-201ENST00000187762 FGD1P98174 961 aa18.97■□□□□ 0.63
TMEM38A-201ENST00000187762 GZF1Q9H116 711 aaPredicted RBP18.97■□□□□ 0.63
TMEM38A-201ENST00000187762 INO80Q9ULG1 1556 aaPredicted RBP18.97■□□□□ 0.63
TMEM38A-201ENST00000187762 FANCAO15360 1455 aa18.97■□□□□ 0.63
TMEM38A-201ENST00000187762 ARAP3Q8WWN8 1544 aa18.97■□□□□ 0.63
TMEM38A-201ENST00000187762 UGGT1Q9NYU2 1555 aa18.97■□□□□ 0.63
TMEM38A-201ENST00000187762 KIF3BO15066 747 aa18.97■□□□□ 0.63
TMEM38A-201ENST00000187762 MYOM1P52179 1685 aa18.96■□□□□ 0.63
TMEM38A-201ENST00000187762 AMER1Q5JTC6 1135 aaPredicted RBP18.96■□□□□ 0.63
TMEM38A-201ENST00000187762 VIRMAQ69YN4 1812 aaKnown RBP18.96■□□□□ 0.63
TMEM38A-201ENST00000187762 ABCA9Q8IUA7 1624 aa18.96■□□□□ 0.63
TMEM38A-201ENST00000187762 SYNMO15061 1565 aa18.95■□□□□ 0.62
TMEM38A-201ENST00000187762 SCAPERQ9BY12 1400 aa18.95■□□□□ 0.62
TMEM38A-201ENST00000187762 INSRP06213 1382 aa18.95■□□□□ 0.62
TMEM38A-201ENST00000187762 MYH16Q9H6N6 1097 aa18.95■□□□□ 0.62
TMEM38A-201ENST00000187762 VWDEQ8N2E2 1590 aa18.93■□□□□ 0.62
TMEM38A-201ENST00000187762 KANK1Q14678 1352 aa18.93■□□□□ 0.62
TMEM38A-201ENST00000187762 PLEKHH1Q9ULM0 1364 aa18.92■□□□□ 0.62
TMEM38A-201ENST00000187762 MCM4P33991 863 aa18.92■□□□□ 0.62
TMEM38A-201ENST00000187762 ADGRL1O94910 1474 aa18.91■□□□□ 0.62
TMEM38A-201ENST00000187762 WDR43Q15061 677 aaKnown RBP eCLIP18.91■□□□□ 0.62
TMEM38A-201ENST00000187762 CFAP70Q5T0N1 1121 aa18.91■□□□□ 0.62
TMEM38A-201ENST00000187762 MROH1Q8NDA8 1641 aa18.91■□□□□ 0.62
TMEM38A-201ENST00000187762 ASXL1Q8IXJ9 1541 aa18.91■□□□□ 0.62
TMEM38A-201ENST00000187762 GRPEL1Q9HAV7 217 aa18.9■□□□□ 0.62
TMEM38A-201ENST00000187762 SEC24BO95487 1268 aa18.9■□□□□ 0.62
TMEM38A-201ENST00000187762 CDCA8Q53HL2 280 aa18.89■□□□□ 0.62
TMEM38A-201ENST00000187762 KIAA1211Q6ZU35 1233 aa18.89■□□□□ 0.62
TMEM38A-201ENST00000187762 KDM5AP29375 1690 aaKnown RBP18.89■□□□□ 0.61
TMEM38A-201ENST00000187762 ABCA6Q8N139 1617 aa18.89■□□□□ 0.61
TMEM38A-201ENST00000187762 ADGRF5Q8IZF2 1346 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms