RNA–Protein interactions for RNA: ENST00000161559.10

CEACAM1-201, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CEACAM1, Length 3,519 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-201ENST00000161559 MYO5CQ9NQX4 1742 aa7.59□□□□□ -1.19
CEACAM1-201ENST00000161559 KCNA4P22459 653 aa7.59□□□□□ -1.19
CEACAM1-201ENST00000161559 NEUROD2Q15784 382 aa7.59□□□□□ -1.19
CEACAM1-201ENST00000161559 RRAGDQ9NQL2 400 aaPredicted RBP7.59□□□□□ -1.19
CEACAM1-201ENST00000161559 MAGI1Q96QZ7 1491 aaPredicted RBP7.59□□□□□ -1.19
CEACAM1-201ENST00000161559 COG6Q9Y2V7 657 aa7.58□□□□□ -1.2
CEACAM1-201ENST00000161559 RRP7AQ9Y3A4 280 aaKnown RBP7.58□□□□□ -1.2
CEACAM1-201ENST00000161559 ZNF521Q96K83 1311 aa7.58□□□□□ -1.2
CEACAM1-201ENST00000161559 SYNJ2O15056 1496 aa7.58□□□□□ -1.2
CEACAM1-201ENST00000161559 GRIN2AQ12879 1464 aa7.58□□□□□ -1.2
CEACAM1-201ENST00000161559 WDR43Q15061 677 aaKnown RBP eCLIP7.58□□□□□ -1.2
CEACAM1-201ENST00000161559 PTPRGP23470 1445 aa7.58□□□□□ -1.2
CEACAM1-201ENST00000161559 TNNT2P45379 298 aaPredicted RBP7.58□□□□□ -1.2
CEACAM1-201ENST00000161559 GOLGA2Q08379 1002 aa7.58□□□□□ -1.2
CEACAM1-201ENST00000161559 GZF1Q9H116 711 aaPredicted RBP7.58□□□□□ -1.2
CEACAM1-201ENST00000161559 AMER1Q5JTC6 1135 aaPredicted RBP7.57□□□□□ -1.2
CEACAM1-201ENST00000161559 SLFN5Q08AF3 891 aa7.57□□□□□ -1.2
CEACAM1-201ENST00000161559 WDR7Q9Y4E6 1490 aa7.57□□□□□ -1.2
CEACAM1-201ENST00000161559 PANK2Q9BZ23 570 aa7.57□□□□□ -1.2
CEACAM1-201ENST00000161559 ABCC10Q5T3U5 1492 aa7.57□□□□□ -1.2
CEACAM1-201ENST00000161559 ATP10BO94823 1461 aa7.56□□□□□ -1.2
CEACAM1-201ENST00000161559 PRDM15P57071 1507 aaPredicted RBP7.56□□□□□ -1.2
CEACAM1-201ENST00000161559 TMF1P82094 1093 aa7.56□□□□□ -1.2
CEACAM1-201ENST00000161559 CLUAP1Q96AJ1 413 aa7.56□□□□□ -1.2
CEACAM1-201ENST00000161559 KNSTRNQ9Y448 316 aa7.56□□□□□ -1.2
CEACAM1-201ENST00000161559 EIF4G3O43432 1585 aaKnown RBP7.56□□□□□ -1.2
CEACAM1-201ENST00000161559 RLBP1P12271 317 aa7.56□□□□□ -1.2
CEACAM1-201ENST00000161559 PLEKHH2Q8IVE3 1493 aa7.55□□□□□ -1.2
CEACAM1-201ENST00000161559 SLC24A1O60721 1099 aa7.55□□□□□ -1.2
CEACAM1-201ENST00000161559 SAMD9LQ8IVG5 1584 aa7.55□□□□□ -1.2
CEACAM1-201ENST00000161559 NLRP1Q9C000 1473 aa7.54□□□□□ -1.2
CEACAM1-201ENST00000161559 PCDHB15Q9Y5E8 787 aa7.54□□□□□ -1.2
CEACAM1-201ENST00000161559 GPRASP1Q5JY77 1395 aa7.54□□□□□ -1.2
CEACAM1-201ENST00000161559 SYCP2Q9BX26 1530 aa7.54□□□□□ -1.2
CEACAM1-201ENST00000161559 UBE2Q2Q8WVN8 375 aa7.53□□□□□ -1.2
CEACAM1-201ENST00000161559 CDC42BPBQ9Y5S2 1711 aa7.53□□□□□ -1.2
CEACAM1-201ENST00000161559 CARD14Q9BXL6 1004 aa7.53□□□□□ -1.2
CEACAM1-201ENST00000161559 ABCA8O94911 1581 aa7.53□□□□□ -1.2
CEACAM1-201ENST00000161559 CANXP27824 592 aaKnown RBP7.52□□□□□ -1.21
CEACAM1-201ENST00000161559 TRMT2AQ8IZ69 625 aaKnown RBP7.52□□□□□ -1.21
CEACAM1-201ENST00000161559 ANTXR1Q9H6X2 564 aa7.52□□□□□ -1.21
CEACAM1-201ENST00000161559 SHANK2Q9UPX8 1470 aa7.52□□□□□ -1.21
CEACAM1-201ENST00000161559 TBC1D2Q9BYX2 928 aa7.52□□□□□ -1.21
CEACAM1-201ENST00000161559 VIRMAQ69YN4 1812 aaKnown RBP7.52□□□□□ -1.21
CEACAM1-201ENST00000161559 NKTRP30414 1462 aaKnown RBP7.51□□□□□ -1.21
CEACAM1-201ENST00000161559 MYOM1P52179 1685 aa7.51□□□□□ -1.21
CEACAM1-201ENST00000161559 XRCC6P12956 609 aaKnown RBP eCLIP7.5□□□□□ -1.21
CEACAM1-201ENST00000161559 FAM43AQ8N2R8 423 aa7.5□□□□□ -1.21
CEACAM1-201ENST00000161559 CCDC141Q6ZP82 1450 aa7.5□□□□□ -1.21
CEACAM1-201ENST00000161559 EIF3AQ14152 1382 aaKnown RBP7.5□□□□□ -1.21
CEACAM1-201ENST00000161559 WWC1Q8IX03 1113 aa7.49□□□□□ -1.21
CEACAM1-201ENST00000161559 TTC37Q6PGP7 1564 aa7.49□□□□□ -1.21
CEACAM1-201ENST00000161559 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.49□□□□□ -1.21
CEACAM1-201ENST00000161559 PDZRN3Q9UPQ7 1066 aa7.49□□□□□ -1.21
CEACAM1-201ENST00000161559 CFAP70Q5T0N1 1121 aa7.49□□□□□ -1.21
CEACAM1-201ENST00000161559 CENPJQ9HC77 1338 aaPredicted RBP7.49□□□□□ -1.21
CEACAM1-201ENST00000161559 INSRP06213 1382 aa7.48□□□□□ -1.21
CEACAM1-201ENST00000161559 FAM69CQ0P6D2 419 aa7.48□□□□□ -1.21
CEACAM1-201ENST00000161559 ASXL1Q8IXJ9 1541 aa7.48□□□□□ -1.21
CEACAM1-201ENST00000161559 MFAP1P55081 439 aaKnown RBP7.48□□□□□ -1.21
CEACAM1-201ENST00000161559 ARHGAP5Q13017 1502 aa7.48□□□□□ -1.21
CEACAM1-201ENST00000161559 RNF17Q9BXT8 1623 aaKnown RBP7.48□□□□□ -1.21
CEACAM1-201ENST00000161559 UGGT1Q9NYU2 1555 aa7.47□□□□□ -1.21
CEACAM1-201ENST00000161559 MADDQ8WXG6 1647 aa7.47□□□□□ -1.21
CEACAM1-201ENST00000161559 ERBB4Q15303 1308 aa7.47□□□□□ -1.21
CEACAM1-201ENST00000161559 TSR2Q969E8 191 aaKnown RBP7.47□□□□□ -1.21
CEACAM1-201ENST00000161559 FOXD4L1Q9NU39 408 aa7.47□□□□□ -1.21
CEACAM1-201ENST00000161559 E9PSI1 815 aa7.47□□□□□ -1.21
CEACAM1-201ENST00000161559 RARSP54136 660 aaKnown RBP7.47□□□□□ -1.21
CEACAM1-201ENST00000161559 TBC1D32Q96NH3 1257 aa7.47□□□□□ -1.21
CEACAM1-201ENST00000161559 ESF1Q9H501 851 aaKnown RBP7.47□□□□□ -1.21
CEACAM1-201ENST00000161559 IQGAP1P46940 1657 aa7.46□□□□□ -1.21
CEACAM1-201ENST00000161559 ARHGEF5Q12774 1597 aa7.46□□□□□ -1.21
CEACAM1-201ENST00000161559 UNC13BO14795 1591 aa7.46□□□□□ -1.22
CEACAM1-201ENST00000161559 NAP1L5Q96NT1 182 aaPredicted RBP7.46□□□□□ -1.22
CEACAM1-201ENST00000161559 LAMC1P11047 1609 aa7.46□□□□□ -1.22
CEACAM1-201ENST00000161559 PREX2Q70Z35 1606 aa7.46□□□□□ -1.22
CEACAM1-201ENST00000161559 AFAP1Q8N556 730 aa7.45□□□□□ -1.22
CEACAM1-201ENST00000161559 ADGRF5Q8IZF2 1346 aa7.45□□□□□ -1.22
CEACAM1-201ENST00000161559 TCP11L2Q8N4U5 519 aa7.45□□□□□ -1.22
CEACAM1-201ENST00000161559 RSPH6AQ9H0K4 717 aa7.45□□□□□ -1.22
CEACAM1-201ENST00000161559 SLC12A5Q9H2X9 1139 aa7.45□□□□□ -1.22
CEACAM1-201ENST00000161559 IQGAP3Q86VI3 1631 aa7.45□□□□□ -1.22
CEACAM1-201ENST00000161559 PIK3C2GO75747 1445 aa7.45□□□□□ -1.22
CEACAM1-201ENST00000161559 CEP152O94986 1710 aa7.45□□□□□ -1.22
CEACAM1-201ENST00000161559 NCBP3Q53F19 620 aaKnown RBP7.44□□□□□ -1.22
CEACAM1-201ENST00000161559 RTEL1-TNFRSF6BF6WH68 1400 aa7.44□□□□□ -1.22
CEACAM1-201ENST00000161559 SYNMO15061 1565 aa7.44□□□□□ -1.22
CEACAM1-201ENST00000161559 CGNL1Q0VF96 1302 aa7.44□□□□□ -1.22
CEACAM1-201ENST00000161559 EIF2AK4Q9P2K8 1649 aaKnown RBP7.44□□□□□ -1.22
CEACAM1-201ENST00000161559 MCM4P33991 863 aa7.44□□□□□ -1.22
CEACAM1-201ENST00000161559 NUTM2DQ5VT03 806 aaPredicted RBP7.44□□□□□ -1.22
CEACAM1-201ENST00000161559 CLASP1Q7Z460 1538 aa7.44□□□□□ -1.22
CEACAM1-201ENST00000161559 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.44□□□□□ -1.22
CEACAM1-201ENST00000161559 BECN1Q14457 450 aa7.44□□□□□ -1.22
CEACAM1-201ENST00000161559 CD2BP2O95400 341 aaKnown RBP7.43□□□□□ -1.22
CEACAM1-201ENST00000161559 GAS2L3Q86XJ1 694 aa7.43□□□□□ -1.22
CEACAM1-201ENST00000161559 ERVK-7P63135 1459 aa7.43□□□□□ -1.22
CEACAM1-201ENST00000161559 ABCC2Q92887 1545 aa7.43□□□□□ -1.22
CEACAM1-201ENST00000161559 CLTCL1P53675 1640 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms