RNA–Protein interactions for RNA: ENST00000056233.3

NFE2L3-201, Transcript of nuclear factor, erythroid 2 like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NFE2L3, Length 3,686 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFE2L3-201ENST00000056233 KIF3BO15066 747 aa21.29■■□□□ 1
NFE2L3-201ENST00000056233 FOXD4L6Q3SYB3 417 aaPredicted RBP21.28■■□□□ 1
NFE2L3-201ENST00000056233 FOXD4L3Q6VB84 417 aaPredicted RBP21.28■■□□□ 1
NFE2L3-201ENST00000056233 CC2D2AQ9P2K1 1620 aa21.28■■□□□ 1
NFE2L3-201ENST00000056233 TROQ12816 1431 aaPredicted RBP21.28■■□□□ 1
NFE2L3-201ENST00000056233 KDM2BQ8NHM5 1336 aa21.27■■□□□ 1
NFE2L3-201ENST00000056233 TESK2Q96S53 571 aa21.27■■□□□ 1
NFE2L3-201ENST00000056233 MCM4P33991 863 aa21.26■□□□□ 0.99
NFE2L3-201ENST00000056233 CHMP5Q9NZZ3 219 aa21.26■□□□□ 0.99
NFE2L3-201ENST00000056233 PCDHB15Q9Y5E8 787 aa21.26■□□□□ 0.99
NFE2L3-201ENST00000056233 CUL7Q14999 1698 aa21.26■□□□□ 0.99
NFE2L3-201ENST00000056233 TMEM132EQ6IEE7 984 aa21.26■□□□□ 0.99
NFE2L3-201ENST00000056233 CARMIL2Q6F5E8 1435 aa21.26■□□□□ 0.99
NFE2L3-201ENST00000056233 SLC12A5Q9H2X9 1139 aa21.26■□□□□ 0.99
NFE2L3-201ENST00000056233 TCOF1Q13428 1488 aaKnown RBP21.25■□□□□ 0.99
NFE2L3-201ENST00000056233 NOL8Q76FK4 1167 aaKnown RBP21.25■□□□□ 0.99
NFE2L3-201ENST00000056233 CTTNBP2Q8WZ74 1663 aa21.25■□□□□ 0.99
NFE2L3-201ENST00000056233 UBE2Q2Q8WVN8 375 aa21.25■□□□□ 0.99
NFE2L3-201ENST00000056233 MTHFSP49914 203 aa21.25■□□□□ 0.99
NFE2L3-201ENST00000056233 ANKRD45Q5TZF3 282 aa21.25■□□□□ 0.99
NFE2L3-201ENST00000056233 SRPK2P78362 688 aaKnown RBP21.24■□□□□ 0.99
NFE2L3-201ENST00000056233 PLCB2Q00722 1185 aa21.24■□□□□ 0.99
NFE2L3-201ENST00000056233 WWC1Q8IX03 1113 aa21.24■□□□□ 0.99
NFE2L3-201ENST00000056233 XRCC6P12956 609 aaKnown RBP eCLIP21.24■□□□□ 0.99
NFE2L3-201ENST00000056233 ZKSCAN2Q63HK3 967 aa21.24■□□□□ 0.99
NFE2L3-201ENST00000056233 ARHGEF11O15085 1522 aa21.24■□□□□ 0.99
NFE2L3-201ENST00000056233 BCORL1Q5H9F3 1711 aa21.24■□□□□ 0.99
NFE2L3-201ENST00000056233 MSNP26038 577 aaKnown RBP21.24■□□□□ 0.99
NFE2L3-201ENST00000056233 DZIP1LQ8IYY4 767 aaKnown RBP21.24■□□□□ 0.99
NFE2L3-201ENST00000056233 C1orf115Q9H7X2 142 aa21.24■□□□□ 0.99
NFE2L3-201ENST00000056233 DNTTIP2Q5QJE6 756 aaKnown RBP21.23■□□□□ 0.99
NFE2L3-201ENST00000056233 GGT6Q6P531 493 aa21.23■□□□□ 0.99
NFE2L3-201ENST00000056233 PTMAP06454 111 aaKnown RBP21.23■□□□□ 0.99
NFE2L3-201ENST00000056233 RLBP1P12271 317 aa21.23■□□□□ 0.99
NFE2L3-201ENST00000056233 IQGAP2Q13576 1575 aa21.22■□□□□ 0.99
NFE2L3-201ENST00000056233 GBP4Q96PP9 640 aa21.22■□□□□ 0.99
NFE2L3-201ENST00000056233 DDX49Q9Y6V7 483 aaKnown RBP21.21■□□□□ 0.99
NFE2L3-201ENST00000056233 RALGAPBQ86X10 1494 aa21.2■□□□□ 0.98
NFE2L3-201ENST00000056233 RBM10P98175 930 aaKnown RBP21.2■□□□□ 0.98
NFE2L3-201ENST00000056233 AFAP1Q8N556 730 aa21.19■□□□□ 0.98
NFE2L3-201ENST00000056233 PDE3AQ14432 1141 aa21.19■□□□□ 0.98
NFE2L3-201ENST00000056233 EXOSC9Q06265 439 aaKnown RBP21.19■□□□□ 0.98
NFE2L3-201ENST00000056233 PKNOX2Q96KN3 472 aa21.18■□□□□ 0.98
NFE2L3-201ENST00000056233 MPNDQ8N594 471 aa21.18■□□□□ 0.98
NFE2L3-201ENST00000056233 AMER1Q5JTC6 1135 aaPredicted RBP21.18■□□□□ 0.98
NFE2L3-201ENST00000056233 SOX12O15370 315 aa21.17■□□□□ 0.98
NFE2L3-201ENST00000056233 RUNDC1Q96C34 613 aa21.17■□□□□ 0.98
NFE2L3-201ENST00000056233 GPATCH8Q9UKJ3 1502 aaKnown RBP21.16■□□□□ 0.98
NFE2L3-201ENST00000056233 RARSP54136 660 aaKnown RBP21.16■□□□□ 0.98
NFE2L3-201ENST00000056233 FAM13BQ9NYF5 915 aa21.16■□□□□ 0.98
NFE2L3-201ENST00000056233 GRPEL1Q9HAV7 217 aa21.16■□□□□ 0.98
NFE2L3-201ENST00000056233 DDX11L8A8MPP1 907 aa21.15■□□□□ 0.98
NFE2L3-201ENST00000056233 GGNBP2Q9H3C7 697 aa21.15■□□□□ 0.98
NFE2L3-201ENST00000056233 STAG3Q9UJ98 1225 aa21.14■□□□□ 0.98
NFE2L3-201ENST00000056233 KIAA0586Q9BVV6 1533 aa21.14■□□□□ 0.97
NFE2L3-201ENST00000056233 NUP153P49790 1475 aaKnown RBP21.14■□□□□ 0.97
NFE2L3-201ENST00000056233 MRE11P49959 708 aa21.14■□□□□ 0.97
NFE2L3-201ENST00000056233 SPAG9O60271 1321 aaKnown RBP21.13■□□□□ 0.97
NFE2L3-201ENST00000056233 ERCC6Q03468 1493 aa21.13■□□□□ 0.97
NFE2L3-201ENST00000056233 ESPNB1AK53 854 aa21.12■□□□□ 0.97
NFE2L3-201ENST00000056233 NKTRP30414 1462 aaKnown RBP21.12■□□□□ 0.97
NFE2L3-201ENST00000056233 TBC1D32Q96NH3 1257 aa21.11■□□□□ 0.97
NFE2L3-201ENST00000056233 GCC2Q8IWJ2 1684 aa21.11■□□□□ 0.97
NFE2L3-201ENST00000056233 ZNF608Q9ULD9 1512 aaPredicted RBP21.11■□□□□ 0.97
NFE2L3-201ENST00000056233 EFCAB2Q5VUJ9 269 aa21.11■□□□□ 0.97
NFE2L3-201ENST00000056233 PLEKHG5O94827 1062 aa21.1■□□□□ 0.97
NFE2L3-201ENST00000056233 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.1■□□□□ 0.97
NFE2L3-201ENST00000056233 NOB1Q9ULX3 412 aaKnown RBP21.1■□□□□ 0.97
NFE2L3-201ENST00000056233 MCTP1Q6DN14 999 aa21.09■□□□□ 0.97
NFE2L3-201ENST00000056233 CABP2Q9NPB3 220 aa21.09■□□□□ 0.97
NFE2L3-201ENST00000056233 LAMC3Q9Y6N6 1575 aa21.09■□□□□ 0.97
NFE2L3-201ENST00000056233 RIPK4P57078 832 aa21.08■□□□□ 0.97
NFE2L3-201ENST00000056233 CALD1Q05682 793 aaKnown RBP21.08■□□□□ 0.97
NFE2L3-201ENST00000056233 PRAG1Q86YV5 1406 aa21.08■□□□□ 0.97
NFE2L3-201ENST00000056233 EIF3AQ14152 1382 aaKnown RBP21.08■□□□□ 0.96
NFE2L3-201ENST00000056233 PTPRGP23470 1445 aa21.07■□□□□ 0.96
NFE2L3-201ENST00000056233 RNF214Q8ND24 703 aa21.07■□□□□ 0.96
NFE2L3-201ENST00000056233 MVPQ14764 893 aaKnown RBP21.07■□□□□ 0.96
NFE2L3-201ENST00000056233 R3HCC1Q9Y3T6 440 aaKnown RBP21.07■□□□□ 0.96
NFE2L3-201ENST00000056233 IPO8O15397 1037 aaKnown RBP21.06■□□□□ 0.96
NFE2L3-201ENST00000056233 RBM42Q9BTD8 480 aaKnown RBP21.06■□□□□ 0.96
NFE2L3-201ENST00000056233 HMOX1P09601 288 aa21.05■□□□□ 0.96
NFE2L3-201ENST00000056233 RSPH4AQ5TD94 716 aa21.05■□□□□ 0.96
NFE2L3-201ENST00000056233 PLPPR3Q6T4P5 718 aa21.05■□□□□ 0.96
NFE2L3-201ENST00000056233 KDM5CP41229 1560 aa21.05■□□□□ 0.96
NFE2L3-201ENST00000056233 CAVIN1Q6NZI2 390 aaKnown RBP21.05■□□□□ 0.96
NFE2L3-201ENST00000056233 DDX19BQ9UMR2 479 aa21.05■□□□□ 0.96
NFE2L3-201ENST00000056233 ZMYND15Q9H091 742 aa21.05■□□□□ 0.96
NFE2L3-201ENST00000056233 NASPP49321 788 aaPredicted RBP21.04■□□□□ 0.96
NFE2L3-201ENST00000056233 TMEM57Q8N5G2 664 aa21.04■□□□□ 0.96
NFE2L3-201ENST00000056233 SAMD9Q5K651 1589 aa21.04■□□□□ 0.96
NFE2L3-201ENST00000056233 THUMPD2Q9BTF0 503 aaKnown RBP21.03■□□□□ 0.96
NFE2L3-201ENST00000056233 TNPO1Q92973 898 aaKnown RBP21.03■□□□□ 0.96
NFE2L3-201ENST00000056233 WDR62O43379 1518 aa21.03■□□□□ 0.96
NFE2L3-201ENST00000056233 SSH1Q8WYL5 1049 aa21.02■□□□□ 0.96
NFE2L3-201ENST00000056233 CARD14Q9BXL6 1004 aa21.02■□□□□ 0.96
NFE2L3-201ENST00000056233 PLEKHH2Q8IVE3 1493 aa21.02■□□□□ 0.95
NFE2L3-201ENST00000056233 DNMT1P26358 1616 aaKnown RBP21.01■□□□□ 0.95
NFE2L3-201ENST00000056233 LRRIQ1Q96JM4 1722 aa21.01■□□□□ 0.95
NFE2L3-201ENST00000056233 KIAA1211Q6ZU35 1233 aa21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 254.5 ms