RNA–Protein interactions for RNA: ENST00000054950.3

RCN1-201, Transcript of reticulocalbin 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RCN1, Length 2,572 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCN1-201ENST00000054950 RGS3P49796 1198 aa26.51■■□□□ 1.83
RCN1-201ENST00000054950 CENPQQ7L2Z9 268 aaPredicted RBP26.51■■□□□ 1.83
RCN1-201ENST00000054950 DDRGK1Q96HY6 314 aa26.51■■□□□ 1.83
RCN1-201ENST00000054950 USP35Q9P2H5 1018 aa26.5■■□□□ 1.83
RCN1-201ENST00000054950 C8orf34Q49A92 452 aa26.49■■□□□ 1.83
RCN1-201ENST00000054950 TRAPPC8Q9Y2L5 1435 aa26.48■■□□□ 1.83
RCN1-201ENST00000054950 SLFN5Q08AF3 891 aa26.48■■□□□ 1.83
RCN1-201ENST00000054950 APAF1O14727 1248 aa26.46■■□□□ 1.83
RCN1-201ENST00000054950 CHD1O14646 1710 aa26.46■■□□□ 1.83
RCN1-201ENST00000054950 BCAR3O75815 825 aa26.46■■□□□ 1.83
RCN1-201ENST00000054950 ASXL1Q8IXJ9 1541 aa26.45■■□□□ 1.83
RCN1-201ENST00000054950 SYNMO15061 1565 aa26.44■■□□□ 1.82
RCN1-201ENST00000054950 DMRT2Q9Y5R5 561 aa26.44■■□□□ 1.82
RCN1-201ENST00000054950 MYOM1P52179 1685 aa26.44■■□□□ 1.82
RCN1-201ENST00000054950 FAM161AQ3B820 660 aa26.44■■□□□ 1.82
RCN1-201ENST00000054950 NFKBIBQ15653 356 aa26.43■■□□□ 1.82
RCN1-201ENST00000054950 SCAF11Q99590 1463 aaKnown RBP26.43■■□□□ 1.82
RCN1-201ENST00000054950 AFAP1Q8N556 730 aa26.42■■□□□ 1.82
RCN1-201ENST00000054950 GOLGA6L2Q8N9W4 650 aaPredicted RBP26.41■■□□□ 1.82
RCN1-201ENST00000054950 SPHKAPQ2M3C7 1700 aa26.41■■□□□ 1.82
RCN1-201ENST00000054950 ABCC2Q92887 1545 aa26.4■■□□□ 1.82
RCN1-201ENST00000054950 CLTCL1P53675 1640 aa26.4■■□□□ 1.82
RCN1-201ENST00000054950 PLCH2O75038 1416 aa26.39■■□□□ 1.82
RCN1-201ENST00000054950 PIK3C2GO75747 1445 aa26.39■■□□□ 1.82
RCN1-201ENST00000054950 EFCAB2Q5VUJ9 269 aa26.39■■□□□ 1.81
RCN1-201ENST00000054950 CDCA8Q53HL2 280 aa26.38■■□□□ 1.81
RCN1-201ENST00000054950 DAXXQ9UER7 740 aaPredicted RBP26.38■■□□□ 1.81
RCN1-201ENST00000054950 TRMT2AQ8IZ69 625 aaKnown RBP26.37■■□□□ 1.81
RCN1-201ENST00000054950 ABCC1P33527 1531 aa26.37■■□□□ 1.81
RCN1-201ENST00000054950 TRPM2O94759 1503 aa26.36■■□□□ 1.81
RCN1-201ENST00000054950 CLASP1Q7Z460 1538 aa26.36■■□□□ 1.81
RCN1-201ENST00000054950 CEP152O94986 1710 aa26.36■■□□□ 1.81
RCN1-201ENST00000054950 SPAG9O60271 1321 aaKnown RBP26.35■■□□□ 1.81
RCN1-201ENST00000054950 CFAP70Q5T0N1 1121 aa26.35■■□□□ 1.81
RCN1-201ENST00000054950 NKTRP30414 1462 aaKnown RBP26.34■■□□□ 1.81
RCN1-201ENST00000054950 IGHDP01880 384 aa26.34■■□□□ 1.81
RCN1-201ENST00000054950 ANO8Q9HCE9 1232 aaPredicted RBP26.33■■□□□ 1.81
RCN1-201ENST00000054950 CARD14Q9BXL6 1004 aa26.33■■□□□ 1.81
RCN1-201ENST00000054950 SCAPERQ9BY12 1400 aa26.32■■□□□ 1.8
RCN1-201ENST00000054950 BRPF3Q9ULD4 1205 aa26.32■■□□□ 1.8
RCN1-201ENST00000054950 SHROOM2Q13796 1616 aa26.32■■□□□ 1.8
RCN1-201ENST00000054950 GSE1Q14687 1217 aa26.31■■□□□ 1.8
RCN1-201ENST00000054950 KDM5AP29375 1690 aaKnown RBP26.3■■□□□ 1.8
RCN1-201ENST00000054950 UGGT1Q9NYU2 1555 aa26.29■■□□□ 1.8
RCN1-201ENST00000054950 ZCCHC11Q5TAX3 1644 aaKnown RBP26.29■■□□□ 1.8
RCN1-201ENST00000054950 FRAT1Q92837 279 aaPredicted RBP26.29■■□□□ 1.8
RCN1-201ENST00000054950 PTPRTO14522 1441 aa26.28■■□□□ 1.8
RCN1-201ENST00000054950 EIF3AQ14152 1382 aaKnown RBP26.28■■□□□ 1.8
RCN1-201ENST00000054950 ADGRF5Q8IZF2 1346 aa26.27■■□□□ 1.8
RCN1-201ENST00000054950 PANK1Q8TE04 598 aa26.27■■□□□ 1.8
RCN1-201ENST00000054950 ERVK-7P63135 1459 aa26.27■■□□□ 1.8
RCN1-201ENST00000054950 E9PSI1 815 aa26.26■■□□□ 1.79
RCN1-201ENST00000054950 FRAT2O75474 233 aaPredicted RBP26.26■■□□□ 1.79
RCN1-201ENST00000054950 NPC1L1Q9UHC9 1359 aa26.26■■□□□ 1.79
RCN1-201ENST00000054950 ZFYVE16Q7Z3T8 1539 aa26.25■■□□□ 1.79
RCN1-201ENST00000054950 TNNT2P45379 298 aaPredicted RBP26.25■■□□□ 1.79
RCN1-201ENST00000054950 NEUROD2Q15784 382 aa26.25■■□□□ 1.79
RCN1-201ENST00000054950 COG6Q9Y2V7 657 aa26.25■■□□□ 1.79
RCN1-201ENST00000054950 RRP7AQ9Y3A4 280 aaKnown RBP26.24■■□□□ 1.79
RCN1-201ENST00000054950 KIF3BO15066 747 aa26.23■■□□□ 1.79
RCN1-201ENST00000054950 SEC24BO95487 1268 aa26.23■■□□□ 1.79
RCN1-201ENST00000054950 CANXP27824 592 aaKnown RBP26.21■■□□□ 1.79
RCN1-201ENST00000054950 ABCA6Q8N139 1617 aa26.2■■□□□ 1.79
RCN1-201ENST00000054950 USP19O94966 1318 aa26.2■■□□□ 1.78
RCN1-201ENST00000054950 CENPJQ9HC77 1338 aaPredicted RBP26.2■■□□□ 1.78
RCN1-201ENST00000054950 WWC1Q8IX03 1113 aa26.19■■□□□ 1.78
RCN1-201ENST00000054950 TET3O43151 1660 aa26.19■■□□□ 1.78
RCN1-201ENST00000054950 TNNQ9UQP3 1299 aa26.19■■□□□ 1.78
RCN1-201ENST00000054950 DEPDC5O75140 1603 aa26.18■■□□□ 1.78
RCN1-201ENST00000054950 CLUAP1Q96AJ1 413 aa26.16■■□□□ 1.78
RCN1-201ENST00000054950 MAP3K4Q9Y6R4 1608 aa26.15■■□□□ 1.78
RCN1-201ENST00000054950 STAC3Q96MF2 364 aa26.15■■□□□ 1.78
RCN1-201ENST00000054950 BCL2L13Q9BXK5 485 aa26.15■■□□□ 1.78
RCN1-201ENST00000054950 RTEL1-TNFRSF6BF6WH68 1400 aa26.14■■□□□ 1.78
RCN1-201ENST00000054950 CGNL1Q0VF96 1302 aa26.14■■□□□ 1.77
RCN1-201ENST00000054950 KANK1Q14678 1352 aa26.14■■□□□ 1.77
RCN1-201ENST00000054950 KIAA1210Q9ULL0 1709 aa26.14■■□□□ 1.77
RCN1-201ENST00000054950 VIRMAQ69YN4 1812 aaKnown RBP26.13■■□□□ 1.77
RCN1-201ENST00000054950 PDE3AQ14432 1141 aa26.12■■□□□ 1.77
RCN1-201ENST00000054950 ZBTB4Q9P1Z0 1013 aaPredicted RBP26.11■■□□□ 1.77
RCN1-201ENST00000054950 ATP7AQ04656 1500 aa26.11■■□□□ 1.77
RCN1-201ENST00000054950 CHGAP10645 457 aaKnown RBP26.1■■□□□ 1.77
RCN1-201ENST00000054950 SLC12A5Q9H2X9 1139 aa26.1■■□□□ 1.77
RCN1-201ENST00000054950 TRAK1Q9UPV9 953 aa26.1■■□□□ 1.77
RCN1-201ENST00000054950 NSD3Q9BZ95 1437 aa26.1■■□□□ 1.77
RCN1-201ENST00000054950 MROH2AA6NES4 1674 aa26.1■■□□□ 1.77
RCN1-201ENST00000054950 RLBP1P12271 317 aa26.1■■□□□ 1.77
RCN1-201ENST00000054950 MORC1Q86VD1 984 aa26.09■■□□□ 1.77
RCN1-201ENST00000054950 POLR3AO14802 1390 aaPredicted RBP26.08■■□□□ 1.77
RCN1-201ENST00000054950 VWDEQ8N2E2 1590 aa26.08■■□□□ 1.77
RCN1-201ENST00000054950 SHPRHQ149N8 1683 aa26.08■■□□□ 1.77
RCN1-201ENST00000054950 TCP11L2Q8N4U5 519 aa26.07■■□□□ 1.76
RCN1-201ENST00000054950 SLKQ9H2G2 1235 aaPredicted RBP26.07■■□□□ 1.76
RCN1-201ENST00000054950 PCDHB15Q9Y5E8 787 aa26.07■■□□□ 1.76
RCN1-201ENST00000054950 RARSP54136 660 aaKnown RBP26.06■■□□□ 1.76
RCN1-201ENST00000054950 MYOM2P54296 1465 aa26.06■■□□□ 1.76
RCN1-201ENST00000054950 MROH1Q8NDA8 1641 aa26.05■■□□□ 1.76
RCN1-201ENST00000054950 KIF1BO60333 1816 aa26.05■■□□□ 1.76
RCN1-201ENST00000054950 INO80Q9ULG1 1556 aaPredicted RBP26.05■■□□□ 1.76
RCN1-201ENST00000054950 NOS1P29475 1434 aa26.04■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 558.6 ms