RNA–Protein interactions for RNA: ENST00000022615.8

VDAC3-201, Transcript of voltage dependent anion channel 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VDAC3, Length 1,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDAC3-201ENST00000022615 NCOA2Q15596 1464 aa9.56□□□□□ -0.88
VDAC3-201ENST00000022615 TRPC5Q9UL62 973 aaPredicted RBP9.56□□□□□ -0.88
VDAC3-201ENST00000022615 INO80Q9ULG1 1556 aaPredicted RBP9.56□□□□□ -0.88
VDAC3-201ENST00000022615 PRXQ9BXM0 1461 aa9.55□□□□□ -0.88
VDAC3-201ENST00000022615 UBR1Q8IWV7 1749 aa9.55□□□□□ -0.88
VDAC3-201ENST00000022615 SLIT1O75093 1534 aa9.55□□□□□ -0.88
VDAC3-201ENST00000022615 CAMTA1Q9Y6Y1 1673 aa9.55□□□□□ -0.88
VDAC3-201ENST00000022615 SETD5Q9C0A6 1442 aa9.55□□□□□ -0.88
VDAC3-201ENST00000022615 UNC13BO14795 1591 aa9.55□□□□□ -0.88
VDAC3-201ENST00000022615 MAST1Q9Y2H9 1570 aa9.55□□□□□ -0.88
VDAC3-201ENST00000022615 PREX2Q70Z35 1606 aa9.55□□□□□ -0.88
VDAC3-201ENST00000022615 FBXO3Q9UK99 471 aa9.54□□□□□ -0.88
VDAC3-201ENST00000022615 SPAG9O60271 1321 aaKnown RBP9.54□□□□□ -0.88
VDAC3-201ENST00000022615 R3HDM1Q15032 1099 aaKnown RBP9.53□□□□□ -0.88
VDAC3-201ENST00000022615 USP21Q9UK80 565 aa9.53□□□□□ -0.88
VDAC3-201ENST00000022615 TXNDC2Q86VQ3 553 aa9.52□□□□□ -0.88
VDAC3-201ENST00000022615 SF3B2Q13435 895 aaKnown RBP9.51□□□□□ -0.89
VDAC3-201ENST00000022615 FNBP4Q8N3X1 1017 aaPredicted RBP9.5□□□□□ -0.89
VDAC3-201ENST00000022615 PNPLA6Q8IY17 1366 aa9.5□□□□□ -0.89
VDAC3-201ENST00000022615 NINLQ9Y2I6 1382 aa9.5□□□□□ -0.89
VDAC3-201ENST00000022615 TROQ12816 1431 aaPredicted RBP9.5□□□□□ -0.89
VDAC3-201ENST00000022615 SPHKAPQ2M3C7 1700 aa9.49□□□□□ -0.89
VDAC3-201ENST00000022615 TET3O43151 1660 aa9.49□□□□□ -0.89
VDAC3-201ENST00000022615 CAPN15O75808 1086 aa9.49□□□□□ -0.89
VDAC3-201ENST00000022615 BRINP3Q76B58 766 aa9.49□□□□□ -0.89
VDAC3-201ENST00000022615 SYCP2Q9BX26 1530 aa9.48□□□□□ -0.89
VDAC3-201ENST00000022615 BRWD3Q6RI45 1802 aa9.48□□□□□ -0.89
VDAC3-201ENST00000022615 ADAMTS2O95450 1211 aa9.48□□□□□ -0.89
VDAC3-201ENST00000022615 PRELPP51888 382 aa9.48□□□□□ -0.89
VDAC3-201ENST00000022615 MROH1Q8NDA8 1641 aa9.47□□□□□ -0.89
VDAC3-201ENST00000022615 GIGYF1O75420 1035 aaPredicted RBP9.47□□□□□ -0.89
VDAC3-201ENST00000022615 BCANQ96GW7 911 aa9.47□□□□□ -0.89
VDAC3-201ENST00000022615 ZNF219Q9P2Y4 722 aaPredicted RBP9.47□□□□□ -0.89
VDAC3-201ENST00000022615 CHD4Q14839 1912 aa9.46□□□□□ -0.89
VDAC3-201ENST00000022615 CAMSAP2Q08AD1 1489 aa9.46□□□□□ -0.9
VDAC3-201ENST00000022615 RALGAPBQ86X10 1494 aa9.46□□□□□ -0.9
VDAC3-201ENST00000022615 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.46□□□□□ -0.9
VDAC3-201ENST00000022615 GPATCH8Q9UKJ3 1502 aaKnown RBP9.46□□□□□ -0.9
VDAC3-201ENST00000022615 ASXL1Q8IXJ9 1541 aa9.45□□□□□ -0.9
VDAC3-201ENST00000022615 ERVK-7P63135 1459 aa9.45□□□□□ -0.9
VDAC3-201ENST00000022615 NCOA3Q9Y6Q9 1424 aa9.45□□□□□ -0.9
VDAC3-201ENST00000022615 BAG6P46379 1132 aa9.45□□□□□ -0.9
VDAC3-201ENST00000022615 LRRC59Q96AG4 307 aaKnown RBP9.45□□□□□ -0.9
VDAC3-201ENST00000022615 WASHC2CQ9Y4E1 1318 aa9.44□□□□□ -0.9
VDAC3-201ENST00000022615 GJD4Q96KN9 370 aaPredicted RBP9.44□□□□□ -0.9
VDAC3-201ENST00000022615 SLC26A8Q96RN1 970 aa9.44□□□□□ -0.9
VDAC3-201ENST00000022615 CDC42BPAQ5VT25 1732 aa9.44□□□□□ -0.9
VDAC3-201ENST00000022615 GLI3P10071 1580 aa9.44□□□□□ -0.9
VDAC3-201ENST00000022615 ARHGAP35Q9NRY4 1499 aa9.43□□□□□ -0.9
VDAC3-201ENST00000022615 CADPS2Q86UW7 1296 aa9.43□□□□□ -0.9
VDAC3-201ENST00000022615 CDK11AQ9UQ88 783 aaPredicted RBP9.43□□□□□ -0.9
VDAC3-201ENST00000022615 EID1Q9Y6B2 187 aa9.43□□□□□ -0.9
VDAC3-201ENST00000022615 CLIP1P30622 1438 aa9.43□□□□□ -0.9
VDAC3-201ENST00000022615 PTCH1Q13635 1447 aa9.43□□□□□ -0.9
VDAC3-201ENST00000022615 DHX29Q7Z478 1369 aaKnown RBP9.42□□□□□ -0.9
VDAC3-201ENST00000022615 HNRNPMP52272 730 aaKnown RBP eCLIP9.42□□□□□ -0.9
VDAC3-201ENST00000022615 HAP1P54257 671 aaPredicted RBP9.42□□□□□ -0.9
VDAC3-201ENST00000022615 TMEM2Q9UHN6 1383 aa9.42□□□□□ -0.9
VDAC3-201ENST00000022615 EN1Q05925 392 aaPredicted RBP9.41□□□□□ -0.9
VDAC3-201ENST00000022615 CHD2O14647 1828 aaKnown RBP9.41□□□□□ -0.9
VDAC3-201ENST00000022615 COL13A1Q5TAT6 717 aaPredicted RBP9.4□□□□□ -0.9
VDAC3-201ENST00000022615 KIAA1107Q9UPP5 1409 aa9.4□□□□□ -0.9
VDAC3-201ENST00000022615 KIF3BO15066 747 aa9.39□□□□□ -0.91
VDAC3-201ENST00000022615 PPP1R1BQ9UD71 204 aaPredicted RBP9.39□□□□□ -0.91
VDAC3-201ENST00000022615 ATF3P18847 181 aa9.38□□□□□ -0.91
VDAC3-201ENST00000022615 POTEHQ6S545 545 aa9.38□□□□□ -0.91
VDAC3-201ENST00000022615 C19orf44Q9H6X5 657 aa9.38□□□□□ -0.91
VDAC3-201ENST00000022615 DISP2A7MBM2 1401 aa9.38□□□□□ -0.91
VDAC3-201ENST00000022615 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.38□□□□□ -0.91
VDAC3-201ENST00000022615 SUPT5HO00267 1087 aaKnown RBP9.37□□□□□ -0.91
VDAC3-201ENST00000022615 VSIG10Q8N0Z9 540 aa9.37□□□□□ -0.91
VDAC3-201ENST00000022615 DDX17Q92841 729 aaKnown RBP9.37□□□□□ -0.91
VDAC3-201ENST00000022615 ZNF777Q9ULD5 760 aaPredicted RBP9.37□□□□□ -0.91
VDAC3-201ENST00000022615 HSPA6P17066 643 aa9.36□□□□□ -0.91
VDAC3-201ENST00000022615 RANGAP1P46060 587 aaPredicted RBP9.36□□□□□ -0.91
VDAC3-201ENST00000022615 SEPT12Q8IYM1 358 aa9.36□□□□□ -0.91
VDAC3-201ENST00000022615 SPON1Q9HCB6 807 aa9.36□□□□□ -0.91
VDAC3-201ENST00000022615 RGPD1P0DJD0 1748 aa9.36□□□□□ -0.91
VDAC3-201ENST00000022615 RNF39Q9H2S5 420 aa9.35□□□□□ -0.91
VDAC3-201ENST00000022615 MST1RQ04912 1400 aa9.34□□□□□ -0.91
VDAC3-201ENST00000022615 PIK3C2BO00750 1634 aa9.34□□□□□ -0.91
VDAC3-201ENST00000022615 LRRIQ1Q96JM4 1722 aa9.34□□□□□ -0.91
VDAC3-201ENST00000022615 SHANK3Q9BYB0 1731 aa9.34□□□□□ -0.91
VDAC3-201ENST00000022615 PLEKHH2Q8IVE3 1493 aa9.34□□□□□ -0.91
VDAC3-201ENST00000022615 KCNQ2O43526 872 aa9.34□□□□□ -0.91
VDAC3-201ENST00000022615 KRT27Q7Z3Y8 459 aa9.34□□□□□ -0.91
VDAC3-201ENST00000022615 C14orf37Q86TY3 774 aa9.34□□□□□ -0.91
VDAC3-201ENST00000022615 TNS1Q9HBL0 1735 aaKnown RBP9.33□□□□□ -0.92
VDAC3-201ENST00000022615 COL22A1Q8NFW1 1626 aaPredicted RBP9.33□□□□□ -0.92
VDAC3-201ENST00000022615 SPDYE4A6NLX3 237 aa9.33□□□□□ -0.92
VDAC3-201ENST00000022615 VASPP50552 380 aaPredicted RBP9.33□□□□□ -0.92
VDAC3-201ENST00000022615 EZH2Q15910 746 aaKnown RBP9.33□□□□□ -0.92
VDAC3-201ENST00000022615 TNS4Q8IZW8 715 aa9.33□□□□□ -0.92
VDAC3-201ENST00000022615 MARF1Q9Y4F3 1742 aaKnown RBP9.33□□□□□ -0.92
VDAC3-201ENST00000022615 DCCP43146 1447 aa9.33□□□□□ -0.92
VDAC3-201ENST00000022615 CFAP65Q6ZU64 1925 aaKnown RBP9.32□□□□□ -0.92
VDAC3-201ENST00000022615 MYOM2P54296 1465 aa9.32□□□□□ -0.92
VDAC3-201ENST00000022615 LAMC1P11047 1609 aa9.32□□□□□ -0.92
VDAC3-201ENST00000022615 ONECUT3O60422 494 aaPredicted RBP9.31□□□□□ -0.92
VDAC3-201ENST00000022615 CAMKK2Q96RR4 588 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms