RNA–Protein interactions for RNA: ENST00000016946.7

RGPD5-201, Transcript of RANBP2-like and GRIP domain containing 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGPD5, Length 7,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD5-201ENST00000016946 DDX58O95786 925 aaKnown RBP13.82□□□□□ -0.2
RGPD5-201ENST00000016946 SPRYD3Q8NCJ5 442 aa13.82□□□□□ -0.2
RGPD5-201ENST00000016946 C9orf78Q9NZ63 289 aaPredicted RBP13.82□□□□□ -0.2
RGPD5-201ENST00000016946 DNMBPQ6XZF7 1577 aa13.82□□□□□ -0.2
RGPD5-201ENST00000016946 ABTB2Q8N961 1025 aa13.81□□□□□ -0.2
RGPD5-201ENST00000016946 PRAM1Q96QH2 718 aa13.81□□□□□ -0.2
RGPD5-201ENST00000016946 API5Q9BZZ5 524 aaKnown RBP13.8□□□□□ -0.2
RGPD5-201ENST00000016946 MFAP1P55081 439 aaKnown RBP13.8□□□□□ -0.2
RGPD5-201ENST00000016946 GNAI1P63096 354 aa13.79□□□□□ -0.2
RGPD5-201ENST00000016946 HTATSF1O43719 755 aaKnown RBP13.79□□□□□ -0.2
RGPD5-201ENST00000016946 RUNDC1Q96C34 613 aa13.79□□□□□ -0.2
RGPD5-201ENST00000016946 KIF7Q2M1P5 1343 aa13.79□□□□□ -0.2
RGPD5-201ENST00000016946 HMOX1P09601 288 aa13.79□□□□□ -0.2
RGPD5-201ENST00000016946 HSP90B1P14625 803 aaKnown RBP13.79□□□□□ -0.2
RGPD5-201ENST00000016946 DNTTIP2Q5QJE6 756 aaKnown RBP13.79□□□□□ -0.2
RGPD5-201ENST00000016946 FKBP5Q13451 457 aaPredicted RBP13.78□□□□□ -0.2
RGPD5-201ENST00000016946 SLC26A8Q96RN1 970 aa13.78□□□□□ -0.2
RGPD5-201ENST00000016946 NECTIN2Q92692 538 aa13.78□□□□□ -0.2
RGPD5-201ENST00000016946 TSPYL4Q9UJ04 414 aa13.78□□□□□ -0.2
RGPD5-201ENST00000016946 USP35Q9P2H5 1018 aa13.78□□□□□ -0.2
RGPD5-201ENST00000016946 PHF23Q9BUL5 403 aaPredicted RBP13.77□□□□□ -0.21
RGPD5-201ENST00000016946 TOP2BQ02880 1626 aa13.76□□□□□ -0.21
RGPD5-201ENST00000016946 ABCA10Q8WWZ4 1543 aa13.76□□□□□ -0.21
RGPD5-201ENST00000016946 CCDC7Q96M83 1385 aa13.76□□□□□ -0.21
RGPD5-201ENST00000016946 RPGRIP1LQ68CZ1 1315 aa13.75□□□□□ -0.21
RGPD5-201ENST00000016946 EHBP1L1Q8N3D4 1523 aa13.75□□□□□ -0.21
RGPD5-201ENST00000016946 LRRFIP1Q32MZ4 808 aaKnown RBP13.74□□□□□ -0.21
RGPD5-201ENST00000016946 CD109Q6YHK3 1445 aa13.74□□□□□ -0.21
RGPD5-201ENST00000016946 LAMC3Q9Y6N6 1575 aa13.74□□□□□ -0.21
RGPD5-201ENST00000016946 ZNF692Q9BU19 519 aaPredicted RBP13.74□□□□□ -0.21
RGPD5-201ENST00000016946 CCDC34Q96HJ3 373 aa13.74□□□□□ -0.21
RGPD5-201ENST00000016946 COG6Q9Y2V7 657 aa13.74□□□□□ -0.21
RGPD5-201ENST00000016946 DDX19BQ9UMR2 479 aa13.73□□□□□ -0.21
RGPD5-201ENST00000016946 ANKRD45Q5TZF3 282 aa13.73□□□□□ -0.21
RGPD5-201ENST00000016946 GBP4Q96PP9 640 aa13.73□□□□□ -0.21
RGPD5-201ENST00000016946 NOL10Q9BSC4 688 aaKnown RBP13.73□□□□□ -0.21
RGPD5-201ENST00000016946 MTHFSP49914 203 aa13.73□□□□□ -0.21
RGPD5-201ENST00000016946 NBPF1Q3BBV0 1214 aa13.73□□□□□ -0.21
RGPD5-201ENST00000016946 STRN4Q9NRL3 753 aa13.73□□□□□ -0.21
RGPD5-201ENST00000016946 PLEKHO1Q53GL0 409 aaPredicted RBP13.72□□□□□ -0.21
RGPD5-201ENST00000016946 GAS2L2Q8NHY3 880 aa13.72□□□□□ -0.21
RGPD5-201ENST00000016946 KLHL34Q8N239 644 aa13.72□□□□□ -0.21
RGPD5-201ENST00000016946 RILPL2Q969X0 211 aa13.72□□□□□ -0.21
RGPD5-201ENST00000016946 KIF3AQ9Y496 699 aa13.72□□□□□ -0.21
RGPD5-201ENST00000016946 ZBED9Q6R2W3 1325 aa13.72□□□□□ -0.21
RGPD5-201ENST00000016946 KIAA1107Q9UPP5 1409 aa13.72□□□□□ -0.21
RGPD5-201ENST00000016946 DZIP1LQ8IYY4 767 aaKnown RBP13.71□□□□□ -0.21
RGPD5-201ENST00000016946 VPS37DQ86XT2 251 aa13.71□□□□□ -0.21
RGPD5-201ENST00000016946 CDK19Q9BWU1 502 aa13.71□□□□□ -0.21
RGPD5-201ENST00000016946 CABP1Q9NZU7 370 aa13.71□□□□□ -0.21
RGPD5-201ENST00000016946 G3BP1Q13283 466 aaKnown RBP eCLIP13.71□□□□□ -0.22
RGPD5-201ENST00000016946 PLIN1O60240 522 aa13.71□□□□□ -0.22
RGPD5-201ENST00000016946 ANKRD30BQ9BXX2 1392 aa13.7□□□□□ -0.22
RGPD5-201ENST00000016946 NOL8Q76FK4 1167 aaKnown RBP13.7□□□□□ -0.22
RGPD5-201ENST00000016946 SLKQ9H2G2 1235 aaPredicted RBP13.7□□□□□ -0.22
RGPD5-201ENST00000016946 IFIT2P09913 472 aaKnown RBP13.7□□□□□ -0.22
RGPD5-201ENST00000016946 RIC3Q7Z5B4 369 aa13.7□□□□□ -0.22
RGPD5-201ENST00000016946 AMOTL1Q8IY63 956 aa13.7□□□□□ -0.22
RGPD5-201ENST00000016946 RASSF8Q8NHQ8 419 aa13.7□□□□□ -0.22
RGPD5-201ENST00000016946 DIAPH3Q9NSV4 1193 aa13.7□□□□□ -0.22
RGPD5-201ENST00000016946 NUTM2BA6NNL0 878 aaPredicted RBP13.7□□□□□ -0.22
RGPD5-201ENST00000016946 NUTM2EB1AL46 878 aaPredicted RBP13.7□□□□□ -0.22
RGPD5-201ENST00000016946 NUTM2AQ8IVF1 878 aaPredicted RBP13.7□□□□□ -0.22
RGPD5-201ENST00000016946 TATP17735 454 aaPredicted RBP13.69□□□□□ -0.22
RGPD5-201ENST00000016946 KIF16BQ96L93 1317 aa13.69□□□□□ -0.22
RGPD5-201ENST00000016946 MAGI1Q96QZ7 1491 aaPredicted RBP13.69□□□□□ -0.22
RGPD5-201ENST00000016946 ROCK1Q13464 1354 aa13.69□□□□□ -0.22
RGPD5-201ENST00000016946 SLC12A5Q9H2X9 1139 aa13.69□□□□□ -0.22
RGPD5-201ENST00000016946 HECW1Q76N89 1606 aa13.69□□□□□ -0.22
RGPD5-201ENST00000016946 AIMP1Q12904 312 aaKnown RBP13.69□□□□□ -0.22
RGPD5-201ENST00000016946 ST18O60284 1047 aa13.69□□□□□ -0.22
RGPD5-201ENST00000016946 RRP1P56182 461 aaKnown RBP13.69□□□□□ -0.22
RGPD5-201ENST00000016946 CENPQQ7L2Z9 268 aaPredicted RBP13.69□□□□□ -0.22
RGPD5-201ENST00000016946 PRDM11Q9NQV5 511 aa13.69□□□□□ -0.22
RGPD5-201ENST00000016946 BICRAQ9NZM4 1560 aa13.68□□□□□ -0.22
RGPD5-201ENST00000016946 RTEL1-TNFRSF6BF6WH68 1400 aa13.68□□□□□ -0.22
RGPD5-201ENST00000016946 CHMP4CQ96CF2 233 aa13.68□□□□□ -0.22
RGPD5-201ENST00000016946 RBM33Q96EV2 1170 aaKnown RBP13.68□□□□□ -0.22
RGPD5-201ENST00000016946 HSP90AB4PQ58FF6 505 aa13.68□□□□□ -0.22
RGPD5-201ENST00000016946 TRIM34Q9BYJ4 488 aa13.68□□□□□ -0.22
RGPD5-201ENST00000016946 GRIN2AQ12879 1464 aa13.67□□□□□ -0.22
RGPD5-201ENST00000016946 DAPK1P53355 1430 aa13.67□□□□□ -0.22
RGPD5-201ENST00000016946 SMG6Q86US8 1419 aaKnown RBP13.67□□□□□ -0.22
RGPD5-201ENST00000016946 TOM1L2Q6ZVM7 507 aa13.67□□□□□ -0.22
RGPD5-201ENST00000016946 EPRSP07814 1512 aaKnown RBP13.67□□□□□ -0.22
RGPD5-201ENST00000016946 MARCH6O60337 910 aa13.67□□□□□ -0.22
RGPD5-201ENST00000016946 PTMSP20962 102 aa13.67□□□□□ -0.22
RGPD5-201ENST00000016946 PRKAR2BP31323 418 aa13.67□□□□□ -0.22
RGPD5-201ENST00000016946 RBM42Q9BTD8 480 aaKnown RBP13.67□□□□□ -0.22
RGPD5-201ENST00000016946 RUFY2Q8WXA3 655 aa13.67□□□□□ -0.22
RGPD5-201ENST00000016946 DRC7Q8IY82 874 aa13.66□□□□□ -0.22
RGPD5-201ENST00000016946 WASHC2AQ641Q2 1341 aa13.66□□□□□ -0.22
RGPD5-201ENST00000016946 ERBINQ96RT1 1412 aa13.66□□□□□ -0.22
RGPD5-201ENST00000016946 TCP11L2Q8N4U5 519 aa13.66□□□□□ -0.22
RGPD5-201ENST00000016946 PIP4K2BP78356 416 aa13.65□□□□□ -0.22
RGPD5-201ENST00000016946 FBXW7Q969H0 707 aa13.65□□□□□ -0.22
RGPD5-201ENST00000016946 VPS53Q5VIR6 699 aa13.65□□□□□ -0.22
RGPD5-201ENST00000016946 EXOC6Q8TAG9 804 aa13.65□□□□□ -0.22
RGPD5-201ENST00000016946 SF3B2Q13435 895 aaKnown RBP13.65□□□□□ -0.22
RGPD5-201ENST00000016946 SYNE3Q6ZMZ3 975 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms