RNA–Protein interactions for RNA: ENST00000011691.5

SS18L2-201, Transcript of SS18 like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SS18L2, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L2-201ENST00000011691 IQGAP3Q86VI3 1631 aa23.92■■□□□ 1.42
SS18L2-201ENST00000011691 SLC26A8Q96RN1 970 aa23.91■■□□□ 1.42
SS18L2-201ENST00000011691 ROCK1Q13464 1354 aa23.91■■□□□ 1.42
SS18L2-201ENST00000011691 SLC52A1Q9NWF4 448 aa23.9■■□□□ 1.42
SS18L2-201ENST00000011691 MED1Q15648 1581 aaPredicted RBP23.9■■□□□ 1.42
SS18L2-201ENST00000011691 TMEM131LA2VDJ0 1609 aa23.89■■□□□ 1.42
SS18L2-201ENST00000011691 BCANQ96GW7 911 aa23.88■■□□□ 1.41
SS18L2-201ENST00000011691 CHGAP10645 457 aaKnown RBP23.84■■□□□ 1.41
SS18L2-201ENST00000011691 ZFYVE9O95405 1425 aa23.84■■□□□ 1.41
SS18L2-201ENST00000011691 SOCS7O14512 581 aa23.83■■□□□ 1.41
SS18L2-201ENST00000011691 RBM33Q96EV2 1170 aaKnown RBP23.83■■□□□ 1.41
SS18L2-201ENST00000011691 RIMS2Q9UQ26 1411 aa23.83■■□□□ 1.4
SS18L2-201ENST00000011691 NUP155O75694 1391 aa23.82■■□□□ 1.4
SS18L2-201ENST00000011691 NWD1Q149M9 1564 aa23.82■■□□□ 1.4
SS18L2-201ENST00000011691 TMEM94Q12767 1356 aa23.81■■□□□ 1.4
SS18L2-201ENST00000011691 PPP1R15AO75807 674 aaPredicted RBP23.81■■□□□ 1.4
SS18L2-201ENST00000011691 CHD2O14647 1828 aaKnown RBP23.81■■□□□ 1.4
SS18L2-201ENST00000011691 KCNA6P17658 529 aa23.8■■□□□ 1.4
SS18L2-201ENST00000011691 PROSER2Q86WR7 435 aaPredicted RBP23.79■■□□□ 1.4
SS18L2-201ENST00000011691 SPHKAPQ2M3C7 1700 aa23.78■■□□□ 1.4
SS18L2-201ENST00000011691 PLEKHG1Q9ULL1 1385 aa23.78■■□□□ 1.4
SS18L2-201ENST00000011691 NUTM2DQ5VT03 806 aaPredicted RBP23.77■■□□□ 1.4
SS18L2-201ENST00000011691 NKTRP30414 1462 aaKnown RBP23.76■■□□□ 1.39
SS18L2-201ENST00000011691 ROBO1Q9Y6N7 1651 aa23.75■■□□□ 1.39
SS18L2-201ENST00000011691 HDGFP51858 240 aaKnown RBP23.72■■□□□ 1.39
SS18L2-201ENST00000011691 RRBP1Q9P2E9 1410 aaKnown RBP23.7■■□□□ 1.38
SS18L2-201ENST00000011691 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.69■■□□□ 1.38
SS18L2-201ENST00000011691 FAM135BQ49AJ0 1406 aa23.67■■□□□ 1.38
SS18L2-201ENST00000011691 ADAMTS13Q76LX8 1427 aa23.67■■□□□ 1.38
SS18L2-201ENST00000011691 MSH6P52701 1360 aa23.66■■□□□ 1.38
SS18L2-201ENST00000011691 DIP2AQ14689 1571 aa23.66■■□□□ 1.38
SS18L2-201ENST00000011691 CLTCL1P53675 1640 aa23.65■■□□□ 1.38
SS18L2-201ENST00000011691 TBX22Q9Y458 520 aa23.64■■□□□ 1.37
SS18L2-201ENST00000011691 NAIPQ13075 1403 aa23.64■■□□□ 1.37
SS18L2-201ENST00000011691 PHLPP1O60346 1717 aa23.62■■□□□ 1.37
SS18L2-201ENST00000011691 KIF1BO60333 1816 aa23.62■■□□□ 1.37
SS18L2-201ENST00000011691 TRPM2O94759 1503 aa23.62■■□□□ 1.37
SS18L2-201ENST00000011691 NRXN3Q9Y4C0 1643 aa23.62■■□□□ 1.37
SS18L2-201ENST00000011691 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.6■■□□□ 1.37
SS18L2-201ENST00000011691 ZNF326Q5BKZ1 582 aaKnown RBP23.6■■□□□ 1.37
SS18L2-201ENST00000011691 C14orf37Q86TY3 774 aa23.6■■□□□ 1.37
SS18L2-201ENST00000011691 SLAIN2Q9P270 581 aa23.57■■□□□ 1.36
SS18L2-201ENST00000011691 PTPRUQ92729 1446 aa23.56■■□□□ 1.36
SS18L2-201ENST00000011691 SETBP1Q9Y6X0 1596 aa23.56■■□□□ 1.36
SS18L2-201ENST00000011691 PIK3R4Q99570 1358 aa23.55■■□□□ 1.36
SS18L2-201ENST00000011691 TRIM52Q96A61 297 aa23.55■■□□□ 1.36
SS18L2-201ENST00000011691 XRN1Q8IZH2 1706 aaKnown RBP23.54■■□□□ 1.36
SS18L2-201ENST00000011691 AMOTL2Q9Y2J4 779 aa23.54■■□□□ 1.36
SS18L2-201ENST00000011691 NEXMIFQ5QGS0 1516 aa23.54■■□□□ 1.36
SS18L2-201ENST00000011691 HFM1A2PYH4 1435 aa23.52■■□□□ 1.36
SS18L2-201ENST00000011691 NCOA3Q9Y6Q9 1424 aa23.51■■□□□ 1.35
SS18L2-201ENST00000011691 COL16A1Q07092 1604 aaPredicted RBP23.5■■□□□ 1.35
SS18L2-201ENST00000011691 RGS17Q9UGC6 210 aaPredicted RBP23.49■■□□□ 1.35
SS18L2-201ENST00000011691 ATF3P18847 181 aa23.47■■□□□ 1.35
SS18L2-201ENST00000011691 C19orf44Q9H6X5 657 aa23.47■■□□□ 1.35
SS18L2-201ENST00000011691 METP08581 1390 aa23.47■■□□□ 1.35
SS18L2-201ENST00000011691 CADPS2Q86UW7 1296 aa23.45■■□□□ 1.34
SS18L2-201ENST00000011691 SLC4A1APQ9BWU0 796 aaKnown RBP23.45■■□□□ 1.34
SS18L2-201ENST00000011691 NALCNQ8IZF0 1738 aa23.44■■□□□ 1.34
SS18L2-201ENST00000011691 PPLO60437 1756 aa23.43■■□□□ 1.34
SS18L2-201ENST00000011691 SETD1AO15047 1707 aaKnown RBP23.43■■□□□ 1.34
SS18L2-201ENST00000011691 JCADQ9P266 1359 aa23.42■■□□□ 1.34
SS18L2-201ENST00000011691 AHDC1Q5TGY3 1603 aaPredicted RBP23.42■■□□□ 1.34
SS18L2-201ENST00000011691 SHPRHQ149N8 1683 aa23.38■■□□□ 1.33
SS18L2-201ENST00000011691 DCCP43146 1447 aa23.37■■□□□ 1.33
SS18L2-201ENST00000011691 POTEAQ6S8J7 498 aa23.37■■□□□ 1.33
SS18L2-201ENST00000011691 BRINP3Q76B58 766 aa23.36■■□□□ 1.33
SS18L2-201ENST00000011691 ASXL1Q8IXJ9 1541 aa23.36■■□□□ 1.33
SS18L2-201ENST00000011691 MST1RQ04912 1400 aa23.35■■□□□ 1.33
SS18L2-201ENST00000011691 LRP6O75581 1613 aa23.35■■□□□ 1.33
SS18L2-201ENST00000011691 ADGRL3Q9HAR2 1447 aa23.34■■□□□ 1.33
SS18L2-201ENST00000011691 NHSL1Q5SYE7 1610 aa23.34■■□□□ 1.33
SS18L2-201ENST00000011691 VGFO15240 615 aaPredicted RBP23.33■■□□□ 1.33
SS18L2-201ENST00000011691 IFT172Q9UG01 1749 aa23.3■■□□□ 1.32
SS18L2-201ENST00000011691 MEX3CQ5U5Q3 659 aaKnown RBP23.29■■□□□ 1.32
SS18L2-201ENST00000011691 SPATA31A6Q5VVP1 1343 aa23.29■■□□□ 1.32
SS18L2-201ENST00000011691 RPGRIP1LQ68CZ1 1315 aa23.29■■□□□ 1.32
SS18L2-201ENST00000011691 CCDC144AA2RUR9 1427 aa23.28■■□□□ 1.32
SS18L2-201ENST00000011691 ROBO2Q9HCK4 1378 aa23.27■■□□□ 1.32
SS18L2-201ENST00000011691 PTCH1Q13635 1447 aa23.27■■□□□ 1.32
SS18L2-201ENST00000011691 DDX17Q92841 729 aaKnown RBP23.27■■□□□ 1.32
SS18L2-201ENST00000011691 RGL3Q3MIN7 710 aa23.26■■□□□ 1.31
SS18L2-201ENST00000011691 MPHOSPH9Q99550 1183 aa23.26■■□□□ 1.31
SS18L2-201ENST00000011691 NUTM2BA6NNL0 878 aaPredicted RBP23.25■■□□□ 1.31
SS18L2-201ENST00000011691 NUTM2EB1AL46 878 aaPredicted RBP23.25■■□□□ 1.31
SS18L2-201ENST00000011691 NUTM2AQ8IVF1 878 aaPredicted RBP23.25■■□□□ 1.31
SS18L2-201ENST00000011691 ADGRF5Q8IZF2 1346 aa23.22■■□□□ 1.31
SS18L2-201ENST00000011691 C1orf167Q5SNV9 1468 aa23.22■■□□□ 1.31
SS18L2-201ENST00000011691 SPATA31E1Q6ZUB1 1445 aa23.21■■□□□ 1.31
SS18L2-201ENST00000011691 SETD5Q9C0A6 1442 aa23.21■■□□□ 1.31
SS18L2-201ENST00000011691 PRAG1Q86YV5 1406 aa23.18■■□□□ 1.3
SS18L2-201ENST00000011691 LAMC1P11047 1609 aa23.16■■□□□ 1.3
SS18L2-201ENST00000011691 LRRC59Q96AG4 307 aaKnown RBP23.16■■□□□ 1.3
SS18L2-201ENST00000011691 ORAI2Q96SN7 254 aa23.16■■□□□ 1.3
SS18L2-201ENST00000011691 STK26Q9P289 416 aa23.16■■□□□ 1.3
SS18L2-201ENST00000011691 ZNF772Q68DY9 489 aaPredicted RBP23.15■■□□□ 1.3
SS18L2-201ENST00000011691 KNDC1Q76NI1 1749 aa23.15■■□□□ 1.3
SS18L2-201ENST00000011691 PNPLA6Q8IY17 1366 aa23.14■■□□□ 1.3
SS18L2-201ENST00000011691 ANKRD30BQ9BXX2 1392 aa23.14■■□□□ 1.3
SS18L2-201ENST00000011691 CDC42BPGQ6DT37 1551 aa23.14■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms