RNA–Protein interactions for RNA: ENSMUST00000202681.3

Pdgfra-208, Transcript of Platelet-derived growth factor receptor alpha, mousemouse

TSL 1 (best) BASIC

Gene Pdgfra, Length 2,876 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdgfra-208ENSMUST00000202681 Mug2P28666 1451 aa11.19□□□□□ -0.62
Pdgfra-208ENSMUST00000202681 Gapvd1Q6PAR5 1458 aa11.19□□□□□ -0.62
Pdgfra-208ENSMUST00000202681 Mapk8ip3Q9ESN9 1337 aa11.18□□□□□ -0.62
Pdgfra-208ENSMUST00000202681 Rrp12Q6P5B0 1295 aaKnown RBP11.18□□□□□ -0.62
Pdgfra-208ENSMUST00000202681 Dusp27Q148W8 1138 aa11.18□□□□□ -0.62
Pdgfra-208ENSMUST00000202681 Gcc2Q8CHG3 1679 aa11.18□□□□□ -0.62
Pdgfra-208ENSMUST00000202681 Gm6268A2A3U9 297 aa11.18□□□□□ -0.62
Pdgfra-208ENSMUST00000202681 Abcc5Q9R1X5 1436 aa11.17□□□□□ -0.62
Pdgfra-208ENSMUST00000202681 PogkQ80TC5 607 aa11.17□□□□□ -0.62
Pdgfra-208ENSMUST00000202681 Card11Q8CIS0 1159 aa11.17□□□□□ -0.62
Pdgfra-208ENSMUST00000202681 Lamc1P02468 1607 aaKnown RBP11.17□□□□□ -0.62
Pdgfra-208ENSMUST00000202681 Kiaa1551Q5DTW7 1521 aa11.16□□□□□ -0.62
Pdgfra-208ENSMUST00000202681 Trappc8E9PWG2 1437 aa11.16□□□□□ -0.62
Pdgfra-208ENSMUST00000202681 Znf316Q6PGE4 1016 aa11.16□□□□□ -0.62
Pdgfra-208ENSMUST00000202681 Adgrb2Q8CGM1 1561 aa11.16□□□□□ -0.62
Pdgfra-208ENSMUST00000202681 Ccdc183A2AJB1 534 aa11.15□□□□□ -0.62
Pdgfra-208ENSMUST00000202681 Q7TT23 1179 aa11.15□□□□□ -0.62
Pdgfra-208ENSMUST00000202681 Kif14L0N7N1 1674 aaKnown RBP11.15□□□□□ -0.62
Pdgfra-208ENSMUST00000202681 Rwdd1Q9CQK7 243 aa11.15□□□□□ -0.62
Pdgfra-208ENSMUST00000202681 Antxr1Q9CZ52 562 aa11.15□□□□□ -0.62
Pdgfra-208ENSMUST00000202681 4930567H17RikQ3V0K5 233 aa11.14□□□□□ -0.63
Pdgfra-208ENSMUST00000202681 Ppp6r1Q7TSI3 856 aa11.14□□□□□ -0.63
Pdgfra-208ENSMUST00000202681 Riok3Q9DBU3 519 aaKnown RBP11.14□□□□□ -0.63
Pdgfra-208ENSMUST00000202681 Rgl3Q3UYI5 709 aa11.14□□□□□ -0.63
Pdgfra-208ENSMUST00000202681 Fancd2Q80V62 1450 aa11.14□□□□□ -0.63
Pdgfra-208ENSMUST00000202681 Il4rP16382 810 aa11.14□□□□□ -0.63
Pdgfra-208ENSMUST00000202681 Nom1Q3UFM5 854 aaKnown RBP11.14□□□□□ -0.63
Pdgfra-208ENSMUST00000202681 Zfp91Q62511 572 aa11.14□□□□□ -0.63
Pdgfra-208ENSMUST00000202681 Atp10dQ8K2X1 1416 aa11.13□□□□□ -0.63
Pdgfra-208ENSMUST00000202681 SphkapQ6NSW3 1687 aa11.13□□□□□ -0.63
Pdgfra-208ENSMUST00000202681 Scaf1Q5U4C3 1256 aaKnown RBP11.13□□□□□ -0.63
Pdgfra-208ENSMUST00000202681 Plekhh2Q8C115 1491 aa11.12□□□□□ -0.63
Pdgfra-208ENSMUST00000202681 Tpm2P58774 284 aa11.12□□□□□ -0.63
Pdgfra-208ENSMUST00000202681 Cep170Q6A065 1588 aa11.12□□□□□ -0.63
Pdgfra-208ENSMUST00000202681 Arhgap5P97393 1501 aa11.12□□□□□ -0.63
Pdgfra-208ENSMUST00000202681 MyclP10166 368 aa11.12□□□□□ -0.63
Pdgfra-208ENSMUST00000202681 Clcn1Q64347 994 aa11.12□□□□□ -0.63
Pdgfra-208ENSMUST00000202681 Rrbp1Q99PL5 1605 aaKnown RBP11.12□□□□□ -0.63
Pdgfra-208ENSMUST00000202681 RalgapbQ8BQZ4 1484 aa11.12□□□□□ -0.63
Pdgfra-208ENSMUST00000202681 Kif16bB1AVY7 1312 aa11.12□□□□□ -0.63
Pdgfra-208ENSMUST00000202681 Sptbn5F6UCX4 1208 aa11.11□□□□□ -0.63
Pdgfra-208ENSMUST00000202681 Mcm4P49717 862 aa11.11□□□□□ -0.63
Pdgfra-208ENSMUST00000202681 Gm156Q58A37 223 aa11.11□□□□□ -0.63
Pdgfra-208ENSMUST00000202681 Dcaf11Q91VU6 549 aa11.11□□□□□ -0.63
Pdgfra-208ENSMUST00000202681 Rbm10Q99KG3 930 aaKnown RBP11.11□□□□□ -0.63
Pdgfra-208ENSMUST00000202681 Plekhh1Q80TI1 1356 aa11.11□□□□□ -0.63
Pdgfra-208ENSMUST00000202681 Cul9Q80TT8 1865 aa11.11□□□□□ -0.63
Pdgfra-208ENSMUST00000202681 Cdk13Q69ZA1 1511 aaKnown RBP11.1□□□□□ -0.63
Pdgfra-208ENSMUST00000202681 Mapkbp1Q6NS57 1503 aa11.1□□□□□ -0.63
Pdgfra-208ENSMUST00000202681 Ncbp3Q8BZR9 615 aaKnown RBP11.1□□□□□ -0.63
Pdgfra-208ENSMUST00000202681 Rrp7aQ9D1C9 280 aaKnown RBP11.1□□□□□ -0.63
Pdgfra-208ENSMUST00000202681 Irf5P56477 497 aa11.1□□□□□ -0.63
Pdgfra-208ENSMUST00000202681 Sart1Q9Z315 806 aaKnown RBP11.1□□□□□ -0.63
Pdgfra-208ENSMUST00000202681 Fam163aQ8CAA5 168 aa11.09□□□□□ -0.63
Pdgfra-208ENSMUST00000202681 Map3k5O35099 1380 aa11.09□□□□□ -0.63
Pdgfra-208ENSMUST00000202681 Clasp1Q80TV8 1535 aaKnown RBP11.09□□□□□ -0.63
Pdgfra-208ENSMUST00000202681 Tubgcp6G5E8P0 1769 aa11.09□□□□□ -0.63
Pdgfra-208ENSMUST00000202681 Lrrc9Q8CDN9 1456 aa11.09□□□□□ -0.63
Pdgfra-208ENSMUST00000202681 Dhx9O70133 1380 aaKnown RBP11.08□□□□□ -0.64
Pdgfra-208ENSMUST00000202681 Rock1P70335 1354 aa11.08□□□□□ -0.64
Pdgfra-208ENSMUST00000202681 Ddrgk1Q80WW9 315 aa11.08□□□□□ -0.64
Pdgfra-208ENSMUST00000202681 NhsB1AV60 1647 aa11.08□□□□□ -0.64
Pdgfra-208ENSMUST00000202681 Apbb1Q9QXJ1 710 aa11.07□□□□□ -0.64
Pdgfra-208ENSMUST00000202681 Tnpo1Q8BFY9 898 aaKnown RBP11.07□□□□□ -0.64
Pdgfra-208ENSMUST00000202681 CrbnQ8C7D2 445 aa11.07□□□□□ -0.64
Pdgfra-208ENSMUST00000202681 Trim44Q9QXA7 346 aa11.07□□□□□ -0.64
Pdgfra-208ENSMUST00000202681 Plch2A2AP18 1501 aa11.06□□□□□ -0.64
Pdgfra-208ENSMUST00000202681 IbspQ61711 324 aa11.06□□□□□ -0.64
Pdgfra-208ENSMUST00000202681 Arid4bA2CG63 1314 aaKnown RBP11.06□□□□□ -0.64
Pdgfra-208ENSMUST00000202681 Esx1O88933 382 aa11.06□□□□□ -0.64
Pdgfra-208ENSMUST00000202681 Ssh1Q76I79 1042 aa11.05□□□□□ -0.64
Pdgfra-208ENSMUST00000202681 Fam208aQ69ZR9 1610 aaKnown RBP11.05□□□□□ -0.64
Pdgfra-208ENSMUST00000202681 Isy1Q69ZQ2 285 aaKnown RBP11.05□□□□□ -0.64
Pdgfra-208ENSMUST00000202681 Stard8Q8K031 1019 aa11.04□□□□□ -0.64
Pdgfra-208ENSMUST00000202681 Tex14Q7M6U3 1450 aa11.04□□□□□ -0.64
Pdgfra-208ENSMUST00000202681 Wdr7Q920I9 1489 aa11.04□□□□□ -0.64
Pdgfra-208ENSMUST00000202681 Rabep1O35551 862 aa11.04□□□□□ -0.64
Pdgfra-208ENSMUST00000202681 AlkP97793 1621 aa11.04□□□□□ -0.64
Pdgfra-208ENSMUST00000202681 Kdm5cP41230 1554 aa11.04□□□□□ -0.64
Pdgfra-208ENSMUST00000202681 Grwd1Q810D6 446 aaKnown RBP11.03□□□□□ -0.64
Pdgfra-208ENSMUST00000202681 Ppp1r18Q8BQ30 594 aa11.03□□□□□ -0.64
Pdgfra-208ENSMUST00000202681 Ripk4Q9ERK0 786 aa11.03□□□□□ -0.64
Pdgfra-208ENSMUST00000202681 Pdia4P08003 638 aaKnown RBP11.02□□□□□ -0.64
Pdgfra-208ENSMUST00000202681 Cpsf1Q9EPU4 1441 aaKnown RBP11.02□□□□□ -0.64
Pdgfra-208ENSMUST00000202681 SlkO54988 1233 aa11.02□□□□□ -0.65
Pdgfra-208ENSMUST00000202681 Trak1Q6PD31 939 aa11.02□□□□□ -0.65
Pdgfra-208ENSMUST00000202681 Tmem132aQ922P8 1018 aa11.02□□□□□ -0.65
Pdgfra-208ENSMUST00000202681 Setd1aE9PYH6 1716 aa11.02□□□□□ -0.65
Pdgfra-208ENSMUST00000202681 Tspyl2Q7TQI8 677 aa11.02□□□□□ -0.65
Pdgfra-208ENSMUST00000202681 Kdm3bQ6ZPY7 1562 aa11.01□□□□□ -0.65
Pdgfra-208ENSMUST00000202681 Supt6hQ62383 1726 aaKnown RBP11.01□□□□□ -0.65
Pdgfra-208ENSMUST00000202681 Ttll5Q8CHB8 1328 aa11.01□□□□□ -0.65
Pdgfra-208ENSMUST00000202681 Vgll3P85442 326 aa11.01□□□□□ -0.65
Pdgfra-208ENSMUST00000202681 Dhx16G3X8X0 1044 aaKnown RBP11□□□□□ -0.65
Pdgfra-208ENSMUST00000202681 Tbc1d32Q3URV1 1296 aa11□□□□□ -0.65
Pdgfra-208ENSMUST00000202681 KarsQ99MN1 595 aaKnown RBP11□□□□□ -0.65
Pdgfra-208ENSMUST00000202681 Asxl1P59598 1514 aa11□□□□□ -0.65
Pdgfra-208ENSMUST00000202681 DroshaQ5HZJ0 1373 aaKnown RBP11□□□□□ -0.65
Pdgfra-208ENSMUST00000202681 Dhx30Q99PU8 1217 aaKnown RBP11□□□□□ -0.65
Pdgfra-208ENSMUST00000202681 Adgrl3Q80TS3 1537 aa11□□□□□ -0.65
Retrieved 100 of 22,080 RNA–protein pairs in 117.9 ms