RNA–Protein interactions for RNA: ENSMUST00000185852.6

Msh3-202, Transcript of DNA mismatch repair protein Msh3, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Msh3, Length 3,946 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3-202ENSMUST00000185852 Nolc1E9Q5C9 702 aaKnown RBP13.81□□□□□ -0.2
Msh3-202ENSMUST00000185852 Mlh3A0A1Y7VMP7 1443 aa13.8□□□□□ -0.2
Msh3-202ENSMUST00000185852 Mapkbp1Q6NS57 1503 aa13.8□□□□□ -0.2
Msh3-202ENSMUST00000185852 Rapgef6Q5NCJ1 1609 aa13.8□□□□□ -0.2
Msh3-202ENSMUST00000185852 NudcO35685 332 aaKnown RBP13.79□□□□□ -0.2
Msh3-202ENSMUST00000185852 PrxO55103 1391 aa13.79□□□□□ -0.2
Msh3-202ENSMUST00000185852 MpripP97434 1024 aa13.78□□□□□ -0.2
Msh3-202ENSMUST00000185852 Fyb1O35601 819 aa13.78□□□□□ -0.2
Msh3-202ENSMUST00000185852 Naip5Q9R016 1403 aa13.78□□□□□ -0.2
Msh3-202ENSMUST00000185852 Bcl2l13P59017 434 aa13.78□□□□□ -0.2
Msh3-202ENSMUST00000185852 Stk31Q99MW1 1018 aa13.78□□□□□ -0.2
Msh3-202ENSMUST00000185852 Lrriq1Q0P5X1 1673 aa13.77□□□□□ -0.21
Msh3-202ENSMUST00000185852 Ssh2Q5SW75 1423 aa13.77□□□□□ -0.21
Msh3-202ENSMUST00000185852 Atp7aQ64430 1491 aa13.76□□□□□ -0.21
Msh3-202ENSMUST00000185852 Znf608Q56A10 1511 aa13.76□□□□□ -0.21
Msh3-202ENSMUST00000185852 Zfp444Q3TDV8 331 aaKnown RBP13.76□□□□□ -0.21
Msh3-202ENSMUST00000185852 OvosQ3UU35 1456 aa13.76□□□□□ -0.21
Msh3-202ENSMUST00000185852 Ccdc30Q8BVF4 654 aa13.76□□□□□ -0.21
Msh3-202ENSMUST00000185852 PnisrA2AJT4 805 aaKnown RBP13.75□□□□□ -0.21
Msh3-202ENSMUST00000185852 Pank1Q8K4K6 548 aa13.75□□□□□ -0.21
Msh3-202ENSMUST00000185852 Larp1bA0A0A6YXJ7 370 aaKnown RBP13.74□□□□□ -0.21
Msh3-202ENSMUST00000185852 Arhgef12Q8R4H2 1543 aaKnown RBP13.73□□□□□ -0.21
Msh3-202ENSMUST00000185852 DekQ7TNV0 380 aaKnown RBP13.72□□□□□ -0.21
Msh3-202ENSMUST00000185852 Caskin1Q6P9K8 1431 aa13.72□□□□□ -0.21
Msh3-202ENSMUST00000185852 AI481877A2ALV5 1481 aa13.72□□□□□ -0.21
Msh3-202ENSMUST00000185852 Rprd2Q6NXI6 1469 aaKnown RBP13.72□□□□□ -0.21
Msh3-202ENSMUST00000185852 Spryd3E9Q9B3 442 aa13.71□□□□□ -0.21
Msh3-202ENSMUST00000185852 GnpatP98192 678 aa13.71□□□□□ -0.21
Msh3-202ENSMUST00000185852 Clstn1Q9EPL2 979 aa13.71□□□□□ -0.21
Msh3-202ENSMUST00000185852 GorabQ8BRM2 368 aa13.7□□□□□ -0.22
Msh3-202ENSMUST00000185852 TatQ8QZR1 454 aa13.7□□□□□ -0.22
Msh3-202ENSMUST00000185852 Adcy10Q8C0T9 1614 aa13.7□□□□□ -0.22
Msh3-202ENSMUST00000185852 Ddx54Q8K4L0 874 aaKnown RBP13.7□□□□□ -0.22
Msh3-202ENSMUST00000185852 Atxn3Q9CVD2 355 aa13.7□□□□□ -0.22
Msh3-202ENSMUST00000185852 Ccar1Q8CH18 1146 aaKnown RBP13.69□□□□□ -0.22
Msh3-202ENSMUST00000185852 Ptch1Q61115 1434 aa13.69□□□□□ -0.22
Msh3-202ENSMUST00000185852 Atf3Q60765 181 aa13.69□□□□□ -0.22
Msh3-202ENSMUST00000185852 Usp16Q99LG0 825 aa13.68□□□□□ -0.22
Msh3-202ENSMUST00000185852 Gm10471E9Q1C7 252 aa13.68□□□□□ -0.22
Msh3-202ENSMUST00000185852 Cabp2Q9JLK4 216 aa13.68□□□□□ -0.22
Msh3-202ENSMUST00000185852 Rusc2Q80U22 1514 aa13.68□□□□□ -0.22
Msh3-202ENSMUST00000185852 Cyb5rlB1AS42 316 aa13.67□□□□□ -0.22
Msh3-202ENSMUST00000185852 Wdr7Q920I9 1489 aa13.67□□□□□ -0.22
Msh3-202ENSMUST00000185852 Kdm5bQ80Y84 1544 aa13.67□□□□□ -0.22
Msh3-202ENSMUST00000185852 Mcm10Q0VBD2 885 aa13.67□□□□□ -0.22
Msh3-202ENSMUST00000185852 Acsbg1Q99PU5 721 aa13.67□□□□□ -0.22
Msh3-202ENSMUST00000185852 Ccdc146E9Q9F7 977 aa13.66□□□□□ -0.22
Msh3-202ENSMUST00000185852 Hsp90b1P08113 802 aaKnown RBP13.66□□□□□ -0.22
Msh3-202ENSMUST00000185852 ChgaP26339 463 aaKnown RBP13.66□□□□□ -0.22
Msh3-202ENSMUST00000185852 G3bp1P97855 465 aaKnown RBP13.66□□□□□ -0.22
Msh3-202ENSMUST00000185852 Kif16bB1AVY7 1312 aa13.66□□□□□ -0.22
Msh3-202ENSMUST00000185852 Plekhg5Q66T02 1073 aa13.66□□□□□ -0.22
Msh3-202ENSMUST00000185852 Ggnbp2Q5SV77 696 aa13.66□□□□□ -0.22
Msh3-202ENSMUST00000185852 Rfx7F8VPJ6 1459 aa13.66□□□□□ -0.22
Msh3-202ENSMUST00000185852 Gm10563F6WIE4 79 aa13.65□□□□□ -0.22
Msh3-202ENSMUST00000185852 Dusp27Q148W8 1138 aa13.65□□□□□ -0.22
Msh3-202ENSMUST00000185852 Zranb3Q6NZP1 1069 aa13.65□□□□□ -0.22
Msh3-202ENSMUST00000185852 Q3UJC8 639 aa13.64□□□□□ -0.23
Msh3-202ENSMUST00000185852 HdgfP51859 237 aaKnown RBP13.64□□□□□ -0.23
Msh3-202ENSMUST00000185852 PalmQ9Z0P4 383 aa13.64□□□□□ -0.23
Msh3-202ENSMUST00000185852 Rbm25B2RY56 838 aaKnown RBP13.63□□□□□ -0.23
Msh3-202ENSMUST00000185852 Rab3gap2Q8BMG7 1366 aa13.63□□□□□ -0.23
Msh3-202ENSMUST00000185852 Mfap1aC0HKD8 439 aaKnown RBP13.63□□□□□ -0.23
Msh3-202ENSMUST00000185852 Mfap1bC0HKD9 439 aaKnown RBP13.63□□□□□ -0.23
Msh3-202ENSMUST00000185852 FanciQ8K368 1330 aa13.63□□□□□ -0.23
Msh3-202ENSMUST00000185852 L3mbtl2P59178 703 aa13.62□□□□□ -0.23
Msh3-202ENSMUST00000185852 Cald1E9QA15 768 aaKnown RBP13.62□□□□□ -0.23
Msh3-202ENSMUST00000185852 Lmo7E9PYF4 1699 aaKnown RBP13.61□□□□□ -0.23
Msh3-202ENSMUST00000185852 Triml2E9PW10 424 aa13.61□□□□□ -0.23
Msh3-202ENSMUST00000185852 Slc4a10Q5DTL9 1118 aa13.61□□□□□ -0.23
Msh3-202ENSMUST00000185852 Eif4g3Q80XI3 1579 aaKnown RBP13.61□□□□□ -0.23
Msh3-202ENSMUST00000185852 Ylpm1Q9R0I7 1386 aaKnown RBP13.61□□□□□ -0.23
Msh3-202ENSMUST00000185852 Adamts12Q811B3 1600 aa13.61□□□□□ -0.23
Msh3-202ENSMUST00000185852 Ralbp1Q62172 648 aa13.61□□□□□ -0.23
Msh3-202ENSMUST00000185852 Pik3c2gO70167 1506 aa13.61□□□□□ -0.23
Msh3-202ENSMUST00000185852 Erich3F6QRE9 1637 aa13.61□□□□□ -0.23
Msh3-202ENSMUST00000185852 Aplp1Q03157 653 aa13.6□□□□□ -0.23
Msh3-202ENSMUST00000185852 Polr3aB2RXC6 1390 aa13.6□□□□□ -0.23
Msh3-202ENSMUST00000185852 Tmem94Q7TSH8 1360 aa13.6□□□□□ -0.23
Msh3-202ENSMUST00000185852 Lmtk2Q3TYD6 1471 aa13.6□□□□□ -0.23
Msh3-202ENSMUST00000185852 Dennd6aQ8BH65 605 aa13.59□□□□□ -0.23
Msh3-202ENSMUST00000185852 Ciz1Q8VEH2 845 aa13.59□□□□□ -0.23
Msh3-202ENSMUST00000185852 Chmp3Q9CQ10 224 aa13.59□□□□□ -0.23
Msh3-202ENSMUST00000185852 Slc52a2Q9D8F3 450 aa13.59□□□□□ -0.23
Msh3-202ENSMUST00000185852 GphnQ8BUV3 769 aaKnown RBP13.59□□□□□ -0.23
Msh3-202ENSMUST00000185852 Sirt1Q923E4 737 aa13.59□□□□□ -0.23
Msh3-202ENSMUST00000185852 Ncoa1P70365 1447 aa13.58□□□□□ -0.23
Msh3-202ENSMUST00000185852 Chmp4cQ9D7F7 232 aa13.58□□□□□ -0.24
Msh3-202ENSMUST00000185852 Abca5Q8K448 1642 aa13.58□□□□□ -0.24
Msh3-202ENSMUST00000185852 Rtl5Q5DTT4 599 aa13.58□□□□□ -0.24
Msh3-202ENSMUST00000185852 EspnQ9ET47 871 aa13.58□□□□□ -0.24
Msh3-202ENSMUST00000185852 Swt1Q9DBQ9 907 aa13.57□□□□□ -0.24
Msh3-202ENSMUST00000185852 DroshaQ5HZJ0 1373 aaKnown RBP13.57□□□□□ -0.24
Msh3-202ENSMUST00000185852 Kdm3bQ6ZPY7 1562 aa13.57□□□□□ -0.24
Msh3-202ENSMUST00000185852 Fkbp4P30416 458 aa13.57□□□□□ -0.24
Msh3-202ENSMUST00000185852 Gm21698A0A087WQP8 267 aa13.57□□□□□ -0.24
Msh3-202ENSMUST00000185852 Gm21671G3UY31 267 aa13.57□□□□□ -0.24
Msh3-202ENSMUST00000185852 Slc12a5Q91V14 1138 aa13.57□□□□□ -0.24
Msh3-202ENSMUST00000185852 Kdm6bQ5NCY0 1641 aa13.56□□□□□ -0.24
Msh3-202ENSMUST00000185852 PtprtQ99M80 1454 aa13.56□□□□□ -0.24
Retrieved 100 of 22,080 RNA–protein pairs in 13.2 ms