RNA–Protein interactions for RNA: ENSMUST00000170957.2

Ggps1-201, Transcript of Geranylgeranyl pyrophosphate synthase, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ggps1, Length 4,244 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ggps1-201ENSMUST00000170957 Gm21190A0A0G2JGJ6 266 aa12.28□□□□□ -0.44
Ggps1-201ENSMUST00000170957 Ggt6Q6PDE7 497 aa12.28□□□□□ -0.44
Ggps1-201ENSMUST00000170957 Cdk19Q8BWD8 501 aa12.28□□□□□ -0.44
Ggps1-201ENSMUST00000170957 NudcO35685 332 aaKnown RBP12.27□□□□□ -0.45
Ggps1-201ENSMUST00000170957 Wdr43Q6ZQL4 677 aaKnown RBP12.27□□□□□ -0.45
Ggps1-201ENSMUST00000170957 Depdc5P61460 1591 aa12.27□□□□□ -0.45
Ggps1-201ENSMUST00000170957 Kiaa1551Q5DTW7 1521 aa12.27□□□□□ -0.45
Ggps1-201ENSMUST00000170957 Slc52a2Q9D8F3 450 aa12.26□□□□□ -0.45
Ggps1-201ENSMUST00000170957 Tnnt1O88346 262 aa12.26□□□□□ -0.45
Ggps1-201ENSMUST00000170957 Rock1P70335 1354 aa12.26□□□□□ -0.45
Ggps1-201ENSMUST00000170957 Setd1bQ8CFT2 1985 aa12.25□□□□□ -0.45
Ggps1-201ENSMUST00000170957 Znf330Q922H9 316 aa12.25□□□□□ -0.45
Ggps1-201ENSMUST00000170957 Asxl1P59598 1514 aa12.25□□□□□ -0.45
Ggps1-201ENSMUST00000170957 Dbr1Q923B1 550 aa12.25□□□□□ -0.45
Ggps1-201ENSMUST00000170957 Bcl11bQ99PV8 884 aa12.25□□□□□ -0.45
Ggps1-201ENSMUST00000170957 Polr3aB2RXC6 1390 aa12.25□□□□□ -0.45
Ggps1-201ENSMUST00000170957 PrxO55103 1391 aa12.24□□□□□ -0.45
Ggps1-201ENSMUST00000170957 Tmco5bQ80X59 307 aa12.24□□□□□ -0.45
Ggps1-201ENSMUST00000170957 Plekhg5Q66T02 1073 aa12.23□□□□□ -0.45
Ggps1-201ENSMUST00000170957 AlkP97793 1621 aa12.23□□□□□ -0.45
Ggps1-201ENSMUST00000170957 FanciQ8K368 1330 aa12.23□□□□□ -0.45
Ggps1-201ENSMUST00000170957 GsdmaQ9EST1 446 aa12.23□□□□□ -0.45
Ggps1-201ENSMUST00000170957 Fgd1P52734 960 aa12.22□□□□□ -0.45
Ggps1-201ENSMUST00000170957 Ksr2Q3UVC0 959 aa12.22□□□□□ -0.45
Ggps1-201ENSMUST00000170957 Ppp2r1aQ76MZ3 589 aa12.22□□□□□ -0.45
Ggps1-201ENSMUST00000170957 Znf518aB2RRF6 1478 aaKnown RBP12.22□□□□□ -0.45
Ggps1-201ENSMUST00000170957 Lrrc9Q8CDN9 1456 aa12.21□□□□□ -0.45
Ggps1-201ENSMUST00000170957 Gli2Q0VGT2 1544 aa12.21□□□□□ -0.45
Ggps1-201ENSMUST00000170957 Yeats2Q3TUF7 1407 aa12.21□□□□□ -0.46
Ggps1-201ENSMUST00000170957 Cyb5rlB1AS42 316 aa12.2□□□□□ -0.46
Ggps1-201ENSMUST00000170957 GphnQ8BUV3 769 aaKnown RBP12.2□□□□□ -0.46
Ggps1-201ENSMUST00000170957 SphkapQ6NSW3 1687 aa12.2□□□□□ -0.46
Ggps1-201ENSMUST00000170957 Pcdh10E9PXQ7 1057 aa12.2□□□□□ -0.46
Ggps1-201ENSMUST00000170957 Apaf1O88879 1249 aa12.2□□□□□ -0.46
Ggps1-201ENSMUST00000170957 Fyb1O35601 819 aa12.2□□□□□ -0.46
Ggps1-201ENSMUST00000170957 Rtn4Q99P72 1162 aaKnown RBP12.19□□□□□ -0.46
Ggps1-201ENSMUST00000170957 HdgfP51859 237 aaKnown RBP12.19□□□□□ -0.46
Ggps1-201ENSMUST00000170957 B4galnt3Q6L8S8 986 aa12.19□□□□□ -0.46
Ggps1-201ENSMUST00000170957 Dnajc5gQ8C632 165 aa12.19□□□□□ -0.46
Ggps1-201ENSMUST00000170957 Fmn2Q9JL04 1578 aa12.19□□□□□ -0.46
Ggps1-201ENSMUST00000170957 Rwdd1Q9CQK7 243 aa12.19□□□□□ -0.46
Ggps1-201ENSMUST00000170957 Fam208aQ69ZR9 1610 aaKnown RBP12.19□□□□□ -0.46
Ggps1-201ENSMUST00000170957 Rtf1A2AQ19 715 aaKnown RBP12.19□□□□□ -0.46
Ggps1-201ENSMUST00000170957 Rtl5Q5DTT4 599 aa12.18□□□□□ -0.46
Ggps1-201ENSMUST00000170957 Cfap65Q3V0B4 1847 aa12.18□□□□□ -0.46
Ggps1-201ENSMUST00000170957 Pak3Q61036 559 aa12.18□□□□□ -0.46
Ggps1-201ENSMUST00000170957 DiexfQ8BTT6 772 aaKnown RBP12.17□□□□□ -0.46
Ggps1-201ENSMUST00000170957 PnisrA2AJT4 805 aaKnown RBP12.16□□□□□ -0.46
Ggps1-201ENSMUST00000170957 1700123L14RikQ3V2K7 440 aa12.16□□□□□ -0.46
Ggps1-201ENSMUST00000170957 Dennd4bQ3U1Y4 1499 aa12.16□□□□□ -0.46
Ggps1-201ENSMUST00000170957 Ubap1lG3UW59 384 aa12.16□□□□□ -0.46
Ggps1-201ENSMUST00000170957 PtprgQ05909 1442 aa12.16□□□□□ -0.46
Ggps1-201ENSMUST00000170957 Atf3Q60765 181 aa12.16□□□□□ -0.46
Ggps1-201ENSMUST00000170957 Cdk13Q69ZA1 1511 aaKnown RBP12.16□□□□□ -0.46
Ggps1-201ENSMUST00000170957 Chmp4bQ9D8B3 224 aaKnown RBP12.16□□□□□ -0.46
Ggps1-201ENSMUST00000170957 Q3UJC8 639 aa12.16□□□□□ -0.46
Ggps1-201ENSMUST00000170957 Mbd3Q9Z2D8 285 aaKnown RBP12.16□□□□□ -0.46
Ggps1-201ENSMUST00000170957 Cdc42bpaQ3UU96 1719 aa12.15□□□□□ -0.46
Ggps1-201ENSMUST00000170957 Mug2P28666 1451 aa12.15□□□□□ -0.46
Ggps1-201ENSMUST00000170957 Camsap2Q8C1B1 1461 aa12.15□□□□□ -0.46
Ggps1-201ENSMUST00000170957 Ncoa1P70365 1447 aa12.15□□□□□ -0.46
Ggps1-201ENSMUST00000170957 NpatQ8BMA5 1420 aa12.15□□□□□ -0.46
Ggps1-201ENSMUST00000170957 Gm10563F6WIE4 79 aa12.15□□□□□ -0.46
Ggps1-201ENSMUST00000170957 Naip6Q9JIB6 1403 aa12.14□□□□□ -0.47
Ggps1-201ENSMUST00000170957 MpripP97434 1024 aa12.13□□□□□ -0.47
Ggps1-201ENSMUST00000170957 GnpatP98192 678 aa12.13□□□□□ -0.47
Ggps1-201ENSMUST00000170957 Stk31Q99MW1 1018 aa12.13□□□□□ -0.47
Ggps1-201ENSMUST00000170957 AatkQ80YE4 1365 aa12.13□□□□□ -0.47
Ggps1-201ENSMUST00000170957 Znf710Q3U288 666 aa12.13□□□□□ -0.47
Ggps1-201ENSMUST00000170957 Q3TQI7 289 aaKnown RBP12.12□□□□□ -0.47
Ggps1-201ENSMUST00000170957 Cluap1Q8R3P7 413 aa12.12□□□□□ -0.47
Ggps1-201ENSMUST00000170957 Trim30dE9PWL0 497 aa12.11□□□□□ -0.47
Ggps1-201ENSMUST00000170957 Tmem94Q7TSH8 1360 aa12.11□□□□□ -0.47
Ggps1-201ENSMUST00000170957 Prrc2bQ7TPM1 1486 aaKnown RBP12.11□□□□□ -0.47
Ggps1-201ENSMUST00000170957 Abcc6Q9R1S7 1498 aa12.11□□□□□ -0.47
Ggps1-201ENSMUST00000170957 Kif16bB1AVY7 1312 aa12.11□□□□□ -0.47
Ggps1-201ENSMUST00000170957 Supt6hQ62383 1726 aaKnown RBP12.11□□□□□ -0.47
Ggps1-201ENSMUST00000170957 Synj2Q9D2G5 1434 aa12.1□□□□□ -0.47
Ggps1-201ENSMUST00000170957 TatQ8QZR1 454 aa12.1□□□□□ -0.47
Ggps1-201ENSMUST00000170957 Edc4Q3UJB9 1406 aaKnown RBP12.1□□□□□ -0.47
Ggps1-201ENSMUST00000170957 Rab3gap2Q8BMG7 1366 aa12.1□□□□□ -0.47
Ggps1-201ENSMUST00000170957 Q8BT18 775 aa12.1□□□□□ -0.47
Ggps1-201ENSMUST00000170957 Zfp444Q3TDV8 331 aaKnown RBP12.1□□□□□ -0.47
Ggps1-201ENSMUST00000170957 Talpid3E9PV87 1520 aa12.09□□□□□ -0.47
Ggps1-201ENSMUST00000170957 Ccdc30Q8BVF4 654 aa12.09□□□□□ -0.47
Ggps1-201ENSMUST00000170957 Usp54Q8BL06 1588 aaKnown RBP12.09□□□□□ -0.47
Ggps1-201ENSMUST00000170957 4930567H17RikQ3V0K5 233 aa12.08□□□□□ -0.48
Ggps1-201ENSMUST00000170957 Ralbp1Q62172 648 aa12.08□□□□□ -0.48
Ggps1-201ENSMUST00000170957 Ccdc60Q8C4J0 545 aa12.08□□□□□ -0.48
Ggps1-201ENSMUST00000170957 AU022751B1B0V2 589 aa12.07□□□□□ -0.48
Ggps1-201ENSMUST00000170957 Ccar1Q8CH18 1146 aaKnown RBP12.07□□□□□ -0.48
Ggps1-201ENSMUST00000170957 Chd1P40201 1711 aa12.07□□□□□ -0.48
Ggps1-201ENSMUST00000170957 Mast1Q9R1L5 1570 aa12.07□□□□□ -0.48
Ggps1-201ENSMUST00000170957 Larp1bA0A0A6YXJ7 370 aaKnown RBP12.07□□□□□ -0.48
Ggps1-201ENSMUST00000170957 Cald1E9QA15 768 aaKnown RBP12.07□□□□□ -0.48
Ggps1-201ENSMUST00000170957 Nectin2P32507 530 aa12.07□□□□□ -0.48
Ggps1-201ENSMUST00000170957 Ddx54Q8K4L0 874 aaKnown RBP12.07□□□□□ -0.48
Ggps1-201ENSMUST00000170957 Dennd6aQ8BH65 605 aa12.06□□□□□ -0.48
Ggps1-201ENSMUST00000170957 Ciz1Q8VEH2 845 aa12.06□□□□□ -0.48
Ggps1-201ENSMUST00000170957 Cpsf1Q9EPU4 1441 aaKnown RBP12.06□□□□□ -0.48
Retrieved 100 of 22,080 RNA–protein pairs in 14 ms