RNA–Protein interactions for RNA: ENSMUST00000159337.7

Vcan-205, Transcript of Versican core protein, mousemouse

TSL 1 (best) BASIC

Gene Vcan, Length 2,273 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vcan-205ENSMUST00000159337 Ifit1bl1D3Z6F0 470 aa19.05■□□□□ 0.64
Vcan-205ENSMUST00000159337 Fancd2Q80V62 1450 aa19.03■□□□□ 0.64
Vcan-205ENSMUST00000159337 Cep170Q6A065 1588 aa19.03■□□□□ 0.64
Vcan-205ENSMUST00000159337 Lrriq1Q0P5X1 1673 aa19.02■□□□□ 0.64
Vcan-205ENSMUST00000159337 Robo2Q7TPD3 1470 aa19.02■□□□□ 0.64
Vcan-205ENSMUST00000159337 Tulp4Q9JIL5 1547 aa19.02■□□□□ 0.64
Vcan-205ENSMUST00000159337 Hecw1Q8K4P8 1604 aa19.01■□□□□ 0.63
Vcan-205ENSMUST00000159337 Mroh3A0A1D5RM54 893 aa19.01■□□□□ 0.63
Vcan-205ENSMUST00000159337 Usp19Q3UJD6 1360 aa19■□□□□ 0.63
Vcan-205ENSMUST00000159337 Ipo8Q7TMY7 1010 aa19■□□□□ 0.63
Vcan-205ENSMUST00000159337 Dcaf11Q91VU6 549 aa18.99■□□□□ 0.63
Vcan-205ENSMUST00000159337 Rrp7aQ9D1C9 280 aaKnown RBP18.99■□□□□ 0.63
Vcan-205ENSMUST00000159337 Eif2s2Q99L45 331 aaKnown RBP18.99■□□□□ 0.63
Vcan-205ENSMUST00000159337 Pdcd11Q6NS46 1862 aaKnown RBP18.99■□□□□ 0.63
Vcan-205ENSMUST00000159337 Col17a1Q07563 1470 aa18.99■□□□□ 0.63
Vcan-205ENSMUST00000159337 Rnf17Q99MV7 1640 aa18.98■□□□□ 0.63
Vcan-205ENSMUST00000159337 Slc4a1apE9PX68 744 aa18.98■□□□□ 0.63
Vcan-205ENSMUST00000159337 AnkarA2RT91 1465 aa18.98■□□□□ 0.63
Vcan-205ENSMUST00000159337 Ppp1r9bQ6R891 817 aaKnown RBP18.98■□□□□ 0.63
Vcan-205ENSMUST00000159337 Ak7Q9D2H2 614 aa18.98■□□□□ 0.63
Vcan-205ENSMUST00000159337 Edc4Q3UJB9 1406 aaKnown RBP18.97■□□□□ 0.63
Vcan-205ENSMUST00000159337 Dnmt1P13864 1620 aaKnown RBP18.97■□□□□ 0.63
Vcan-205ENSMUST00000159337 Itsn2Q9Z0R6 1659 aa18.97■□□□□ 0.63
Vcan-205ENSMUST00000159337 Fam184bQ0KK56 942 aa18.97■□□□□ 0.63
Vcan-205ENSMUST00000159337 Ccdc30Q8BVF4 654 aa18.97■□□□□ 0.63
Vcan-205ENSMUST00000159337 Apbb1Q9QXJ1 710 aa18.96■□□□□ 0.63
Vcan-205ENSMUST00000159337 Arhgap5P97393 1501 aa18.96■□□□□ 0.63
Vcan-205ENSMUST00000159337 Speer4f1Q9D5Q6 258 aa18.95■□□□□ 0.62
Vcan-205ENSMUST00000159337 Cfap74Q3UY96 1578 aa18.95■□□□□ 0.62
Vcan-205ENSMUST00000159337 Zbtb7cQ8VCZ7 619 aa18.95■□□□□ 0.62
Vcan-205ENSMUST00000159337 Kcnn1Q9EQR3 537 aa18.95■□□□□ 0.62
Vcan-205ENSMUST00000159337 Ccdc183A2AJB1 534 aa18.94■□□□□ 0.62
Vcan-205ENSMUST00000159337 Trim30dE9PWL0 497 aa18.94■□□□□ 0.62
Vcan-205ENSMUST00000159337 Hsp90ab1P11499 724 aaKnown RBP18.93■□□□□ 0.62
Vcan-205ENSMUST00000159337 Srcin1Q9QWI6 1250 aa18.93■□□□□ 0.62
Vcan-205ENSMUST00000159337 Znf521Q6KAS7 1311 aa18.92■□□□□ 0.62
Vcan-205ENSMUST00000159337 Kdm5aQ3UXZ9 1690 aa18.91■□□□□ 0.62
Vcan-205ENSMUST00000159337 Tspyl2Q7TQI8 677 aa18.9■□□□□ 0.62
Vcan-205ENSMUST00000159337 Htatsf1Q8BGC0 757 aa18.89■□□□□ 0.61
Vcan-205ENSMUST00000159337 Sart1Q9Z315 806 aaKnown RBP18.89■□□□□ 0.61
Vcan-205ENSMUST00000159337 Neo1P97798 1493 aa18.88■□□□□ 0.61
Vcan-205ENSMUST00000159337 Uggt2E9Q4X2 1504 aa18.88■□□□□ 0.61
Vcan-205ENSMUST00000159337 Jph4Q80WT0 628 aa18.88■□□□□ 0.61
Vcan-205ENSMUST00000159337 Pdcl3Q8BVF2 240 aa18.88■□□□□ 0.61
Vcan-205ENSMUST00000159337 AI481877A2ALV5 1481 aa18.87■□□□□ 0.61
Vcan-205ENSMUST00000159337 4930567H17RikQ3V0K5 233 aa18.86■□□□□ 0.61
Vcan-205ENSMUST00000159337 Cdc42bpbQ7TT50 1713 aa18.86■□□□□ 0.61
Vcan-205ENSMUST00000159337 Abcc6Q9R1S7 1498 aa18.86■□□□□ 0.61
Vcan-205ENSMUST00000159337 Myom2Q14BI5 1463 aa18.86■□□□□ 0.61
Vcan-205ENSMUST00000159337 Kif7B7ZNG0 1348 aa18.86■□□□□ 0.61
Vcan-205ENSMUST00000159337 Spag9Q58A65 1321 aaKnown RBP18.85■□□□□ 0.61
Vcan-205ENSMUST00000159337 Ralbp1Q62172 648 aa18.85■□□□□ 0.61
Vcan-205ENSMUST00000159337 Neurod2Q62414 383 aa18.85■□□□□ 0.61
Vcan-205ENSMUST00000159337 Pknox2Q8BG99 474 aa18.85■□□□□ 0.61
Vcan-205ENSMUST00000159337 Abcc3B2RX12 1523 aa18.85■□□□□ 0.61
Vcan-205ENSMUST00000159337 Nsd2Q8BVE8 1365 aa18.84■□□□□ 0.61
Vcan-205ENSMUST00000159337 AampJ3QN89 436 aa18.84■□□□□ 0.61
Vcan-205ENSMUST00000159337 Pde4cQ3UEI1 686 aa18.84■□□□□ 0.61
Vcan-205ENSMUST00000159337 ShprhQ7TPQ3 1674 aa18.83■□□□□ 0.61
Vcan-205ENSMUST00000159337 Kiaa1107Q80TK0 1369 aa18.83■□□□□ 0.6
Vcan-205ENSMUST00000159337 Kif1bQ60575 1816 aaKnown RBP18.83■□□□□ 0.6
Vcan-205ENSMUST00000159337 Uspl1Q3ULM6 1089 aa18.83■□□□□ 0.6
Vcan-205ENSMUST00000159337 Golga2Q921M4 999 aa18.83■□□□□ 0.6
Vcan-205ENSMUST00000159337 Abcc1O35379 1528 aa18.82■□□□□ 0.6
Vcan-205ENSMUST00000159337 Myom1Q62234 1667 aaKnown RBP18.82■□□□□ 0.6
Vcan-205ENSMUST00000159337 Nlrp6Q91WS2 869 aa18.82■□□□□ 0.6
Vcan-205ENSMUST00000159337 Prdm16A2A935 1275 aa18.81■□□□□ 0.6
Vcan-205ENSMUST00000159337 Usp54Q8BL06 1588 aaKnown RBP18.81■□□□□ 0.6
Vcan-205ENSMUST00000159337 AknaQ80VW7 1404 aa18.81■□□□□ 0.6
Vcan-205ENSMUST00000159337 Sptbn5F6UCX4 1208 aa18.8■□□□□ 0.6
Vcan-205ENSMUST00000159337 Trim58Q5NCC9 485 aa18.8■□□□□ 0.6
Vcan-205ENSMUST00000159337 Pank1Q8K4K6 548 aa18.8■□□□□ 0.6
Vcan-205ENSMUST00000159337 Rlbp1Q9Z275 317 aa18.8■□□□□ 0.6
Vcan-205ENSMUST00000159337 Fam135bQ9DAI6 1403 aa18.8■□□□□ 0.6
Vcan-205ENSMUST00000159337 Abca17E9PX95 1733 aa18.8■□□□□ 0.6
Vcan-205ENSMUST00000159337 AU015836B2RUM3 263 aa18.8■□□□□ 0.6
Vcan-205ENSMUST00000159337 Fkbp15Q6P9Q6 1216 aaKnown RBP18.79■□□□□ 0.6
Vcan-205ENSMUST00000159337 Gtf2a1Q99PM3 378 aa18.79■□□□□ 0.6
Vcan-205ENSMUST00000159337 4933402E13RikQ9D4D2 429 aa18.79■□□□□ 0.6
Vcan-205ENSMUST00000159337 Cep152A2AUM9 1736 aaKnown RBP18.79■□□□□ 0.6
Vcan-205ENSMUST00000159337 Rusc2Q80U22 1514 aa18.79■□□□□ 0.6
Vcan-205ENSMUST00000159337 Gprasp1Q5U4C1 1347 aa18.78■□□□□ 0.6
Vcan-205ENSMUST00000159337 Duxf3A0A0N4SV92 674 aa18.78■□□□□ 0.6
Vcan-205ENSMUST00000159337 Gm6268A2A3U9 297 aa18.78■□□□□ 0.6
Vcan-205ENSMUST00000159337 Ppp2r3aB2RXC8 1150 aa18.77■□□□□ 0.6
Vcan-205ENSMUST00000159337 Gas2l2Q5SSG4 860 aa18.77■□□□□ 0.6
Vcan-205ENSMUST00000159337 Kiaa1210E9Q0C6 1637 aa18.77■□□□□ 0.6
Vcan-205ENSMUST00000159337 Iqsec2Q5DU25 1478 aa18.76■□□□□ 0.59
Vcan-205ENSMUST00000159337 Kdm2aP59997 1161 aa18.75■□□□□ 0.59
Vcan-205ENSMUST00000159337 Antxr1Q9CZ52 562 aa18.75■□□□□ 0.59
Vcan-205ENSMUST00000159337 Map4k4P97820 1233 aaKnown RBP18.75■□□□□ 0.59
Vcan-205ENSMUST00000159337 Tbc1d32Q3URV1 1296 aa18.74■□□□□ 0.59
Vcan-205ENSMUST00000159337 Ylpm1Q9R0I7 1386 aaKnown RBP18.73■□□□□ 0.59
Vcan-205ENSMUST00000159337 Rabep1O35551 862 aa18.73■□□□□ 0.59
Vcan-205ENSMUST00000159337 KarsQ99MN1 595 aaKnown RBP18.72■□□□□ 0.59
Vcan-205ENSMUST00000159337 Phf14Q9D4H9 881 aa18.72■□□□□ 0.59
Vcan-205ENSMUST00000159337 Talpid3E9PV87 1520 aa18.72■□□□□ 0.59
Vcan-205ENSMUST00000159337 Stard8Q8K031 1019 aa18.72■□□□□ 0.59
Vcan-205ENSMUST00000159337 Kif20aP97329 887 aa18.71■□□□□ 0.59
Vcan-205ENSMUST00000159337 Tnpo1Q8BFY9 898 aaKnown RBP18.71■□□□□ 0.59
Retrieved 100 of 22,080 RNA–protein pairs in 12 ms