RNA–Protein interactions for RNA: ENSMUST00000119954.8

Pcf11-201, Transcript of Cleavage and polyadenylation factor subunit homolog (S. cerevisiae), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcf11, Length 5,995 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcf11-201ENSMUST00000119954 Gpatch3Q8BIY1 525 aa21.27■■□□□ 1
Pcf11-201ENSMUST00000119954 Mrvi1Q9WUX5 899 aaKnown RBP21.27■■□□□ 1
Pcf11-201ENSMUST00000119954 Necab1Q8BG18 352 aa21.27■□□□□ 0.99
Pcf11-201ENSMUST00000119954 Phactr2B1AVP0 632 aa21.26■□□□□ 0.99
Pcf11-201ENSMUST00000119954 Ccdc43Q9CR29 222 aaKnown RBP21.26■□□□□ 0.99
Pcf11-201ENSMUST00000119954 G3bp1P97855 465 aaKnown RBP21.26■□□□□ 0.99
Pcf11-201ENSMUST00000119954 Rnf20Q5DTM8 973 aa21.25■□□□□ 0.99
Pcf11-201ENSMUST00000119954 Rsph6aQ8CDR2 708 aa21.25■□□□□ 0.99
Pcf11-201ENSMUST00000119954 HmmrQ00547 794 aaKnown RBP21.25■□□□□ 0.99
Pcf11-201ENSMUST00000119954 Wdr78E9PYY5 807 aa21.25■□□□□ 0.99
Pcf11-201ENSMUST00000119954 Cabp4Q8VHC5 271 aa21.25■□□□□ 0.99
Pcf11-201ENSMUST00000119954 Hap1O35668 628 aa21.24■□□□□ 0.99
Pcf11-201ENSMUST00000119954 Baz1bQ9Z277 1479 aa21.24■□□□□ 0.99
Pcf11-201ENSMUST00000119954 Kif3bQ61771 747 aa21.24■□□□□ 0.99
Pcf11-201ENSMUST00000119954 Cdkn1cP49919 348 aa21.24■□□□□ 0.99
Pcf11-201ENSMUST00000119954 Ubxn4Q8VCH8 506 aa21.24■□□□□ 0.99
Pcf11-201ENSMUST00000119954 Fyco1Q8VDC1 1437 aa21.23■□□□□ 0.99
Pcf11-201ENSMUST00000119954 Stk31Q99MW1 1018 aa21.22■□□□□ 0.99
Pcf11-201ENSMUST00000119954 Arhgap35Q91YM2 1499 aa21.22■□□□□ 0.99
Pcf11-201ENSMUST00000119954 Stard8Q8K031 1019 aa21.22■□□□□ 0.99
Pcf11-201ENSMUST00000119954 Hdgfl1Q2VPR5 283 aa21.22■□□□□ 0.99
Pcf11-201ENSMUST00000119954 Cabp1Q9JLK7 227 aa21.21■□□□□ 0.99
Pcf11-201ENSMUST00000119954 Rnf214Q8BFU3 668 aaKnown RBP21.21■□□□□ 0.99
Pcf11-201ENSMUST00000119954 AcrbpQ3V140 540 aa21.21■□□□□ 0.99
Pcf11-201ENSMUST00000119954 Ddx11Q6AXC6 880 aa21.21■□□□□ 0.99
Pcf11-201ENSMUST00000119954 Fnbp4Q6ZQ03 1031 aa21.21■□□□□ 0.99
Pcf11-201ENSMUST00000119954 Gps2Q921N8 327 aa21.2■□□□□ 0.99
Pcf11-201ENSMUST00000119954 Hnrnpul1Q8VDM6 859 aaKnown RBP21.2■□□□□ 0.98
Pcf11-201ENSMUST00000119954 Rock1P70335 1354 aa21.2■□□□□ 0.98
Pcf11-201ENSMUST00000119954 Trim58Q5NCC9 485 aa21.2■□□□□ 0.98
Pcf11-201ENSMUST00000119954 Rbm10Q99KG3 930 aaKnown RBP21.2■□□□□ 0.98
Pcf11-201ENSMUST00000119954 PogkQ80TC5 607 aa21.19■□□□□ 0.98
Pcf11-201ENSMUST00000119954 Tceal9Q9DD24 104 aa21.19■□□□□ 0.98
Pcf11-201ENSMUST00000119954 Kif7B7ZNG0 1348 aa21.18■□□□□ 0.98
Pcf11-201ENSMUST00000119954 Klf15Q9EPW2 415 aa21.18■□□□□ 0.98
Pcf11-201ENSMUST00000119954 Smc4Q8CG47 1286 aa21.18■□□□□ 0.98
Pcf11-201ENSMUST00000119954 Atl3Q91YH5 541 aa21.18■□□□□ 0.98
Pcf11-201ENSMUST00000119954 Utp14aQ640M1 767 aaKnown RBP21.17■□□□□ 0.98
Pcf11-201ENSMUST00000119954 Pip4k2bQ80XI4 416 aa21.17■□□□□ 0.98
Pcf11-201ENSMUST00000119954 Pank3Q8R2W9 370 aa21.17■□□□□ 0.98
Pcf11-201ENSMUST00000119954 Mad1l1Q9WTX8 717 aaKnown RBP21.17■□□□□ 0.98
Pcf11-201ENSMUST00000119954 Tmco3Q8BH01 678 aa21.17■□□□□ 0.98
Pcf11-201ENSMUST00000119954 BbxQ8VBW5 907 aa21.17■□□□□ 0.98
Pcf11-201ENSMUST00000119954 Trim55G3X8Y1 545 aa21.16■□□□□ 0.98
Pcf11-201ENSMUST00000119954 Nap1l1P28656 391 aaKnown RBP21.16■□□□□ 0.98
Pcf11-201ENSMUST00000119954 Cc2d1aQ8K1A6 943 aa21.16■□□□□ 0.98
Pcf11-201ENSMUST00000119954 Ripply1Q2WG77 201 aa21.16■□□□□ 0.98
Pcf11-201ENSMUST00000119954 CenpjQ569L8 1344 aa21.15■□□□□ 0.98
Pcf11-201ENSMUST00000119954 March6Q6ZQ89 909 aa21.15■□□□□ 0.98
Pcf11-201ENSMUST00000119954 Ccp110Q7TSH4 1004 aa21.15■□□□□ 0.98
Pcf11-201ENSMUST00000119954 Znf704Q9ERQ3 566 aa21.15■□□□□ 0.98
Pcf11-201ENSMUST00000119954 Gtf2a1Q99PM3 378 aa21.15■□□□□ 0.98
Pcf11-201ENSMUST00000119954 Rpap1Q80TE0 1409 aa21.14■□□□□ 0.98
Pcf11-201ENSMUST00000119954 Triml2E9PW10 424 aa21.14■□□□□ 0.97
Pcf11-201ENSMUST00000119954 PhaxQ9JJT9 385 aaKnown RBP21.14■□□□□ 0.97
Pcf11-201ENSMUST00000119954 Fam43aQ8BUP8 424 aa21.13■□□□□ 0.97
Pcf11-201ENSMUST00000119954 Ccdc96Q9CR92 584 aa21.13■□□□□ 0.97
Pcf11-201ENSMUST00000119954 Q9D2X8 372 aa21.13■□□□□ 0.97
Pcf11-201ENSMUST00000119954 Cchcr1Q8K2I2 770 aa21.13■□□□□ 0.97
Pcf11-201ENSMUST00000119954 Fan1Q69ZT1 1020 aa21.13■□□□□ 0.97
Pcf11-201ENSMUST00000119954 GsdmaQ9EST1 446 aa21.13■□□□□ 0.97
Pcf11-201ENSMUST00000119954 Eva1cP58659 440 aa21.12■□□□□ 0.97
Pcf11-201ENSMUST00000119954 Gprasp1Q5U4C1 1347 aa21.12■□□□□ 0.97
Pcf11-201ENSMUST00000119954 Ccdc183A2AJB1 534 aa21.12■□□□□ 0.97
Pcf11-201ENSMUST00000119954 Aebp1Q640N1 1128 aa21.12■□□□□ 0.97
Pcf11-201ENSMUST00000119954 Phf14Q9D4H9 881 aa21.11■□□□□ 0.97
Pcf11-201ENSMUST00000119954 Nup155Q99P88 1391 aaKnown RBP21.11■□□□□ 0.97
Pcf11-201ENSMUST00000119954 PdcQ9QW08 244 aa21.11■□□□□ 0.97
Pcf11-201ENSMUST00000119954 Cfap99A0A140LIX9 648 aa21.1■□□□□ 0.97
Pcf11-201ENSMUST00000119954 Sycp1Q62209 993 aa21.1■□□□□ 0.97
Pcf11-201ENSMUST00000119954 Cetn4Q8K4K1 168 aa21.09■□□□□ 0.97
Pcf11-201ENSMUST00000119954 KarsQ99MN1 595 aaKnown RBP21.09■□□□□ 0.97
Pcf11-201ENSMUST00000119954 Chmp4cQ9D7F7 232 aa21.09■□□□□ 0.97
Pcf11-201ENSMUST00000119954 Sytl4Q9R0Q1 673 aa21.09■□□□□ 0.97
Pcf11-201ENSMUST00000119954 Cep162Q6ZQ06 1403 aa21.09■□□□□ 0.97
Pcf11-201ENSMUST00000119954 Fez1Q8K0X8 392 aa21.09■□□□□ 0.97
Pcf11-201ENSMUST00000119954 BcanQ61361 883 aa21.09■□□□□ 0.97
Pcf11-201ENSMUST00000119954 Nop14Q8R3N1 860 aaKnown RBP21.09■□□□□ 0.97
Pcf11-201ENSMUST00000119954 Trim29Q8R2Q0 587 aa21.08■□□□□ 0.97
Pcf11-201ENSMUST00000119954 Prkrip1Q9CWV6 186 aaKnown RBP21.08■□□□□ 0.97
Pcf11-201ENSMUST00000119954 FosbP13346 338 aa21.08■□□□□ 0.96
Pcf11-201ENSMUST00000119954 Nol12Q8BG17 217 aa21.07■□□□□ 0.96
Pcf11-201ENSMUST00000119954 Chmp7Q8R1T1 451 aa21.06■□□□□ 0.96
Pcf11-201ENSMUST00000119954 Inpp5dQ9ES52 1191 aa21.06■□□□□ 0.96
Pcf11-201ENSMUST00000119954 Erc2Q6PH08 957 aa21.06■□□□□ 0.96
Pcf11-201ENSMUST00000119954 Usp48Q3V0C5 1052 aa21.05■□□□□ 0.96
Pcf11-201ENSMUST00000119954 Dhx8A2A4P0 1244 aaKnown RBP21.05■□□□□ 0.96
Pcf11-201ENSMUST00000119954 Cep112Q5PR68 954 aa21.05■□□□□ 0.96
Pcf11-201ENSMUST00000119954 Ints3Q7TPD0 1041 aaKnown RBP21.04■□□□□ 0.96
Pcf11-201ENSMUST00000119954 Rab11fip3Q8CHD8 1047 aa21.03■□□□□ 0.96
Pcf11-201ENSMUST00000119954 Ccar2Q8VDP4 922 aaKnown RBP21.03■□□□□ 0.96
Pcf11-201ENSMUST00000119954 Esx1O88933 382 aa21.03■□□□□ 0.96
Pcf11-201ENSMUST00000119954 NefhP19246 1090 aa21.03■□□□□ 0.96
Pcf11-201ENSMUST00000119954 Hmox1P14901 289 aa21.02■□□□□ 0.96
Pcf11-201ENSMUST00000119954 Fmnl2A2APV2 1086 aa21.02■□□□□ 0.96
Pcf11-201ENSMUST00000119954 Nek4Q9Z1J2 792 aa21.02■□□□□ 0.95
Pcf11-201ENSMUST00000119954 Gm21190A0A0G2JGJ6 266 aa21.01■□□□□ 0.95
Pcf11-201ENSMUST00000119954 1700010I14RikQ7TPG0 532 aa21.01■□□□□ 0.95
Pcf11-201ENSMUST00000119954 Gbp4Q61107 620 aa21.01■□□□□ 0.95
Pcf11-201ENSMUST00000119954 Psma5Q9Z2U1 241 aaKnown RBP21.01■□□□□ 0.95
Retrieved 100 of 22,080 RNA–protein pairs in 11 ms