RNA–Protein interactions for RNA: ENSMUST00000116359.2

Ctc1-202, Transcript of CST complex subunit CTC1, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Ctc1, Length 3,978 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctc1-202ENSMUST00000116359 Card11Q8CIS0 1159 aa12.91□□□□□ -0.34
Ctc1-202ENSMUST00000116359 Tmem132aQ922P8 1018 aa12.91□□□□□ -0.34
Ctc1-202ENSMUST00000116359 Chmp4bQ9D8B3 224 aaKnown RBP12.91□□□□□ -0.34
Ctc1-202ENSMUST00000116359 Kif16bB1AVY7 1312 aa12.9□□□□□ -0.34
Ctc1-202ENSMUST00000116359 KarsQ99MN1 595 aaKnown RBP12.9□□□□□ -0.34
Ctc1-202ENSMUST00000116359 Igf1rQ60751 1373 aa12.9□□□□□ -0.34
Ctc1-202ENSMUST00000116359 Rabep1O35551 862 aa12.9□□□□□ -0.34
Ctc1-202ENSMUST00000116359 Rgl3Q3UYI5 709 aa12.9□□□□□ -0.34
Ctc1-202ENSMUST00000116359 Tspyl2Q7TQI8 677 aa12.9□□□□□ -0.34
Ctc1-202ENSMUST00000116359 Erich6bQ9D4S6 220 aa12.9□□□□□ -0.34
Ctc1-202ENSMUST00000116359 Arhgap31A6X8Z5 1425 aa12.9□□□□□ -0.34
Ctc1-202ENSMUST00000116359 Zmym4A2A791 1549 aaKnown RBP12.9□□□□□ -0.34
Ctc1-202ENSMUST00000116359 Zfp644E9QA22 1323 aa12.9□□□□□ -0.34
Ctc1-202ENSMUST00000116359 Arhgef12Q8R4H2 1543 aaKnown RBP12.9□□□□□ -0.34
Ctc1-202ENSMUST00000116359 Aebp1Q640N1 1128 aa12.89□□□□□ -0.35
Ctc1-202ENSMUST00000116359 Plcd3Q8K2J0 785 aa12.89□□□□□ -0.35
Ctc1-202ENSMUST00000116359 Isy1Q69ZQ2 285 aaKnown RBP12.89□□□□□ -0.35
Ctc1-202ENSMUST00000116359 Ttc41Q692V3 1318 aa12.89□□□□□ -0.35
Ctc1-202ENSMUST00000116359 Esx1O88933 382 aa12.89□□□□□ -0.35
Ctc1-202ENSMUST00000116359 Kif27Q7M6Z4 1394 aa12.89□□□□□ -0.35
Ctc1-202ENSMUST00000116359 Mug1P28665 1476 aa12.89□□□□□ -0.35
Ctc1-202ENSMUST00000116359 Naip6Q9JIB6 1403 aa12.88□□□□□ -0.35
Ctc1-202ENSMUST00000116359 Ush1cQ9ES64 910 aa12.87□□□□□ -0.35
Ctc1-202ENSMUST00000116359 Gm1043A0A140LJC2 1431 aa12.87□□□□□ -0.35
Ctc1-202ENSMUST00000116359 Arid4bA2CG63 1314 aaKnown RBP12.87□□□□□ -0.35
Ctc1-202ENSMUST00000116359 Vsig10D3YX43 558 aa12.87□□□□□ -0.35
Ctc1-202ENSMUST00000116359 Zhx1P70121 873 aa12.87□□□□□ -0.35
Ctc1-202ENSMUST00000116359 Lmod3E9QA62 571 aa12.86□□□□□ -0.35
Ctc1-202ENSMUST00000116359 Kiaa0753Q6A000 959 aa12.86□□□□□ -0.35
Ctc1-202ENSMUST00000116359 Cux1P53564 1515 aa12.86□□□□□ -0.35
Ctc1-202ENSMUST00000116359 Stac3Q8BZ71 360 aa12.86□□□□□ -0.35
Ctc1-202ENSMUST00000116359 Plekhh1Q80TI1 1356 aa12.85□□□□□ -0.35
Ctc1-202ENSMUST00000116359 Cers3Q1A3B0 383 aa12.85□□□□□ -0.35
Ctc1-202ENSMUST00000116359 Ccnb3Q810T2 1396 aa12.85□□□□□ -0.35
Ctc1-202ENSMUST00000116359 Abcc2Q8VI47 1543 aa12.85□□□□□ -0.35
Ctc1-202ENSMUST00000116359 Sox12Q04890 314 aa12.85□□□□□ -0.35
Ctc1-202ENSMUST00000116359 MpndQ3TV65 487 aa12.85□□□□□ -0.35
Ctc1-202ENSMUST00000116359 Ddit3P35639 168 aa12.84□□□□□ -0.35
Ctc1-202ENSMUST00000116359 Dnmt1P13864 1620 aaKnown RBP12.84□□□□□ -0.35
Ctc1-202ENSMUST00000116359 Terf2O35144 541 aa12.84□□□□□ -0.35
Ctc1-202ENSMUST00000116359 Fam13bQ8K2H3 851 aa12.84□□□□□ -0.35
Ctc1-202ENSMUST00000116359 Pik3c2gO70167 1506 aa12.83□□□□□ -0.36
Ctc1-202ENSMUST00000116359 Tbc1d32Q3URV1 1296 aa12.83□□□□□ -0.36
Ctc1-202ENSMUST00000116359 Pdcl2Q78Y63 240 aa12.83□□□□□ -0.36
Ctc1-202ENSMUST00000116359 BC005561E9Q5E2 1589 aa12.82□□□□□ -0.36
Ctc1-202ENSMUST00000116359 Mug2P28666 1451 aa12.82□□□□□ -0.36
Ctc1-202ENSMUST00000116359 Abca16E9PWJ7 1678 aa12.82□□□□□ -0.36
Ctc1-202ENSMUST00000116359 Nectin2P32507 530 aa12.82□□□□□ -0.36
Ctc1-202ENSMUST00000116359 Gzf1Q4VBD9 706 aa12.82□□□□□ -0.36
Ctc1-202ENSMUST00000116359 Map3k4O08648 1597 aa12.82□□□□□ -0.36
Ctc1-202ENSMUST00000116359 Ppp2r3aB2RXC8 1150 aa12.81□□□□□ -0.36
Ctc1-202ENSMUST00000116359 Becn1O88597 448 aa12.81□□□□□ -0.36
Ctc1-202ENSMUST00000116359 Ccdc94Q9D6J3 314 aa12.81□□□□□ -0.36
Ctc1-202ENSMUST00000116359 Mbd5B1AYB6 1498 aa12.81□□□□□ -0.36
Ctc1-202ENSMUST00000116359 Depdc5P61460 1591 aa12.81□□□□□ -0.36
Ctc1-202ENSMUST00000116359 Grwd1Q810D6 446 aaKnown RBP12.8□□□□□ -0.36
Ctc1-202ENSMUST00000116359 Chd1P40201 1711 aa12.8□□□□□ -0.36
Ctc1-202ENSMUST00000116359 Rlbp1Q9Z275 317 aa12.8□□□□□ -0.36
Ctc1-202ENSMUST00000116359 Rock1P70335 1354 aa12.8□□□□□ -0.36
Ctc1-202ENSMUST00000116359 Atp10dQ8K2X1 1416 aa12.8□□□□□ -0.36
Ctc1-202ENSMUST00000116359 Mfap1aC0HKD8 439 aaKnown RBP12.8□□□□□ -0.36
Ctc1-202ENSMUST00000116359 Mfap1bC0HKD9 439 aaKnown RBP12.8□□□□□ -0.36
Ctc1-202ENSMUST00000116359 Znf608Q56A10 1511 aa12.79□□□□□ -0.36
Ctc1-202ENSMUST00000116359 Polr1aO35134 1717 aaKnown RBP12.79□□□□□ -0.36
Ctc1-202ENSMUST00000116359 Nsfl1cQ9CZ44 370 aaKnown RBP12.79□□□□□ -0.36
Ctc1-202ENSMUST00000116359 Adamts12Q811B3 1600 aa12.79□□□□□ -0.36
Ctc1-202ENSMUST00000116359 Cbx1P83917 185 aaKnown RBP12.79□□□□□ -0.36
Ctc1-202ENSMUST00000116359 Pank2Q3U4S0 443 aa12.79□□□□□ -0.36
Ctc1-202ENSMUST00000116359 Pnmal2G3X9N3 661 aa12.78□□□□□ -0.36
Ctc1-202ENSMUST00000116359 Dnajc5gQ8C632 165 aa12.78□□□□□ -0.36
Ctc1-202ENSMUST00000116359 Pank1Q8K4K6 548 aa12.78□□□□□ -0.36
Ctc1-202ENSMUST00000116359 Cabp1Q9JLK7 227 aa12.78□□□□□ -0.36
Ctc1-202ENSMUST00000116359 Ccdc141E9Q8Q6 1531 aa12.78□□□□□ -0.36
Ctc1-202ENSMUST00000116359 Pnma3Q8JZW8 466 aa12.78□□□□□ -0.36
Ctc1-202ENSMUST00000116359 Rfx1P48377 963 aa12.77□□□□□ -0.36
Ctc1-202ENSMUST00000116359 Neurod2Q62414 383 aa12.77□□□□□ -0.36
Ctc1-202ENSMUST00000116359 Lemd3Q9WU40 921 aa12.77□□□□□ -0.36
Ctc1-202ENSMUST00000116359 Fez1Q8K0X8 392 aa12.77□□□□□ -0.37
Ctc1-202ENSMUST00000116359 Wdr7Q920I9 1489 aa12.77□□□□□ -0.37
Ctc1-202ENSMUST00000116359 Ylpm1Q9R0I7 1386 aaKnown RBP12.76□□□□□ -0.37
Ctc1-202ENSMUST00000116359 Gtpbp6Q3U6U5 514 aa12.76□□□□□ -0.37
Ctc1-202ENSMUST00000116359 Pank3Q8R2W9 370 aa12.76□□□□□ -0.37
Ctc1-202ENSMUST00000116359 Dhx9O70133 1380 aaKnown RBP12.75□□□□□ -0.37
Ctc1-202ENSMUST00000116359 Kif2cQ922S8 721 aa12.75□□□□□ -0.37
Ctc1-202ENSMUST00000116359 Speer4f1Q9D5Q6 258 aa12.75□□□□□ -0.37
Ctc1-202ENSMUST00000116359 Cdk13Q69ZA1 1511 aaKnown RBP12.75□□□□□ -0.37
Ctc1-202ENSMUST00000116359 Kif14L0N7N1 1674 aaKnown RBP12.75□□□□□ -0.37
Ctc1-202ENSMUST00000116359 PtmaP26350 111 aa12.74□□□□□ -0.37
Ctc1-202ENSMUST00000116359 Rps6ka5Q8C050 863 aa12.74□□□□□ -0.37
Ctc1-202ENSMUST00000116359 Duxf3A0A0N4SV92 674 aa12.73□□□□□ -0.37
Ctc1-202ENSMUST00000116359 Fam114a1Q9D281 569 aa12.73□□□□□ -0.37
Ctc1-202ENSMUST00000116359 MsnP26041 577 aaKnown RBP12.72□□□□□ -0.37
Ctc1-202ENSMUST00000116359 Rsph3aQ3UFY4 516 aa12.72□□□□□ -0.37
Ctc1-202ENSMUST00000116359 Kank4Q6P9J5 1016 aa12.72□□□□□ -0.37
Ctc1-202ENSMUST00000116359 Tmx3Q8BXZ1 456 aa12.72□□□□□ -0.37
Ctc1-202ENSMUST00000116359 Ccdc30Q8BVF4 654 aa12.72□□□□□ -0.37
Ctc1-202ENSMUST00000116359 Rfx7F8VPJ6 1459 aa12.71□□□□□ -0.37
Ctc1-202ENSMUST00000116359 Wdr78E9PYY5 807 aa12.71□□□□□ -0.37
Ctc1-202ENSMUST00000116359 SphkapQ6NSW3 1687 aa12.71□□□□□ -0.38
Ctc1-202ENSMUST00000116359 Znf326O88291 580 aa12.71□□□□□ -0.38
Retrieved 100 of 22,080 RNA–protein pairs in 10.5 ms