RNA–Protein interactions for RNA: ENSMUST00000100164.4

Hoxc4-201, Transcript of Homeobox protein Hox-C4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hoxc4, Length 1,983 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc4-201ENSMUST00000100164 EspnQ9ET47 871 aa18.22■□□□□ 0.51
Hoxc4-201ENSMUST00000100164 NudcO35685 332 aaKnown RBP18.21■□□□□ 0.51
Hoxc4-201ENSMUST00000100164 Rpgrip1lQ8CG73 1264 aa18.21■□□□□ 0.51
Hoxc4-201ENSMUST00000100164 Tubgcp6G5E8P0 1769 aa18.21■□□□□ 0.51
Hoxc4-201ENSMUST00000100164 PtprmP28828 1452 aa18.21■□□□□ 0.51
Hoxc4-201ENSMUST00000100164 SphkapQ6NSW3 1687 aa18.21■□□□□ 0.51
Hoxc4-201ENSMUST00000100164 Adcy10Q8C0T9 1614 aa18.2■□□□□ 0.5
Hoxc4-201ENSMUST00000100164 Il16O54824 1322 aa18.2■□□□□ 0.5
Hoxc4-201ENSMUST00000100164 Ercc6l2Q9JIM3 1537 aa18.19■□□□□ 0.5
Hoxc4-201ENSMUST00000100164 AlkP97793 1621 aa18.19■□□□□ 0.5
Hoxc4-201ENSMUST00000100164 Kdm3bQ6ZPY7 1562 aa18.19■□□□□ 0.5
Hoxc4-201ENSMUST00000100164 Cpsf1Q9EPU4 1441 aaKnown RBP18.18■□□□□ 0.5
Hoxc4-201ENSMUST00000100164 Safb2Q80YR5 991 aaKnown RBP18.17■□□□□ 0.5
Hoxc4-201ENSMUST00000100164 Sart1Q9Z315 806 aaKnown RBP18.17■□□□□ 0.5
Hoxc4-201ENSMUST00000100164 AU015836B2RUM3 263 aa18.17■□□□□ 0.5
Hoxc4-201ENSMUST00000100164 Setd1aE9PYH6 1716 aa18.17■□□□□ 0.5
Hoxc4-201ENSMUST00000100164 Arhgef40Q3UPH7 1517 aa18.16■□□□□ 0.5
Hoxc4-201ENSMUST00000100164 Arid4bA2CG63 1314 aaKnown RBP18.16■□□□□ 0.5
Hoxc4-201ENSMUST00000100164 Tmc1Q8R4P5 757 aa18.15■□□□□ 0.5
Hoxc4-201ENSMUST00000100164 Talpid3E9PV87 1520 aa18.15■□□□□ 0.5
Hoxc4-201ENSMUST00000100164 Rgl3Q3UYI5 709 aa18.15■□□□□ 0.5
Hoxc4-201ENSMUST00000100164 Hecw1Q8K4P8 1604 aa18.14■□□□□ 0.5
Hoxc4-201ENSMUST00000100164 Dhx9O70133 1380 aaKnown RBP18.14■□□□□ 0.49
Hoxc4-201ENSMUST00000100164 MyclP10166 368 aa18.12■□□□□ 0.49
Hoxc4-201ENSMUST00000100164 Cdk13Q69ZA1 1511 aaKnown RBP18.12■□□□□ 0.49
Hoxc4-201ENSMUST00000100164 Mroh3A0A1D5RM54 893 aa18.11■□□□□ 0.49
Hoxc4-201ENSMUST00000100164 B4galnt3Q6L8S8 986 aa18.11■□□□□ 0.49
Hoxc4-201ENSMUST00000100164 Rrp9Q91WM3 475 aaKnown RBP18.11■□□□□ 0.49
Hoxc4-201ENSMUST00000100164 Supt6hQ62383 1726 aaKnown RBP18.11■□□□□ 0.49
Hoxc4-201ENSMUST00000100164 Cdc42bpgQ80UW5 1551 aa18.11■□□□□ 0.49
Hoxc4-201ENSMUST00000100164 4933402E13RikQ9D4D2 429 aa18.11■□□□□ 0.49
Hoxc4-201ENSMUST00000100164 Asxl1P59598 1514 aa18.1■□□□□ 0.49
Hoxc4-201ENSMUST00000100164 Cdc42bpbQ7TT50 1713 aa18.1■□□□□ 0.49
Hoxc4-201ENSMUST00000100164 Iqgap1Q9JKF1 1657 aaKnown RBP18.09■□□□□ 0.49
Hoxc4-201ENSMUST00000100164 Polr3aB2RXC6 1390 aa18.08■□□□□ 0.49
Hoxc4-201ENSMUST00000100164 Chmp5Q9D7S9 219 aa18.08■□□□□ 0.49
Hoxc4-201ENSMUST00000100164 Cfap65Q3V0B4 1847 aa18.08■□□□□ 0.48
Hoxc4-201ENSMUST00000100164 Smc5Q8CG46 1101 aaKnown RBP18.08■□□□□ 0.48
Hoxc4-201ENSMUST00000100164 Trpm1Q2TV84 1622 aa18.07■□□□□ 0.48
Hoxc4-201ENSMUST00000100164 Mapk8ip3Q9ESN9 1337 aa18.07■□□□□ 0.48
Hoxc4-201ENSMUST00000100164 Nos1Q9Z0J4 1429 aa18.06■□□□□ 0.48
Hoxc4-201ENSMUST00000100164 Trpm2Q91YD4 1506 aa18.06■□□□□ 0.48
Hoxc4-201ENSMUST00000100164 Q7TT23 1179 aa18.06■□□□□ 0.48
Hoxc4-201ENSMUST00000100164 Htatsf1Q8BGC0 757 aa18.06■□□□□ 0.48
Hoxc4-201ENSMUST00000100164 Adgrb2Q8CGM1 1561 aa18.06■□□□□ 0.48
Hoxc4-201ENSMUST00000100164 Myom2Q14BI5 1463 aa18.05■□□□□ 0.48
Hoxc4-201ENSMUST00000100164 Ahdc1Q6PAL7 1594 aaKnown RBP18.05■□□□□ 0.48
Hoxc4-201ENSMUST00000100164 Rwdd1Q9CQK7 243 aa18.05■□□□□ 0.48
Hoxc4-201ENSMUST00000100164 Plch2A2AP18 1501 aa18.04■□□□□ 0.48
Hoxc4-201ENSMUST00000100164 Kif20aP97329 887 aa18.04■□□□□ 0.48
Hoxc4-201ENSMUST00000100164 Phf14Q9D4H9 881 aa18.04■□□□□ 0.48
Hoxc4-201ENSMUST00000100164 Tex14Q7M6U3 1450 aa18.04■□□□□ 0.48
Hoxc4-201ENSMUST00000100164 Ttll5Q8CHB8 1328 aa18.03■□□□□ 0.48
Hoxc4-201ENSMUST00000100164 Rad21Q61550 635 aaKnown RBP18.03■□□□□ 0.48
Hoxc4-201ENSMUST00000100164 Ppp1r9bQ6R891 817 aaKnown RBP18.03■□□□□ 0.48
Hoxc4-201ENSMUST00000100164 Ipo8Q7TMY7 1010 aa18.03■□□□□ 0.48
Hoxc4-201ENSMUST00000100164 Abca6Q8K441 1624 aa18.03■□□□□ 0.48
Hoxc4-201ENSMUST00000100164 Prdm16A2A935 1275 aa18.02■□□□□ 0.47
Hoxc4-201ENSMUST00000100164 Rock1P70335 1354 aa18.01■□□□□ 0.47
Hoxc4-201ENSMUST00000100164 Kif16bB1AVY7 1312 aa18.01■□□□□ 0.47
Hoxc4-201ENSMUST00000100164 Plekhh1Q80TI1 1356 aa18.01■□□□□ 0.47
Hoxc4-201ENSMUST00000100164 Rsph4aQ8BYM7 716 aa18■□□□□ 0.47
Hoxc4-201ENSMUST00000100164 Dbr1Q923B1 550 aa18■□□□□ 0.47
Hoxc4-201ENSMUST00000100164 Map3k5O35099 1380 aa18■□□□□ 0.47
Hoxc4-201ENSMUST00000100164 Afap1Q80YS6 731 aa17.99■□□□□ 0.47
Hoxc4-201ENSMUST00000100164 Gli2Q0VGT2 1544 aa17.98■□□□□ 0.47
Hoxc4-201ENSMUST00000100164 Mast1Q9R1L5 1570 aa17.98■□□□□ 0.47
Hoxc4-201ENSMUST00000100164 Trak1Q6PD31 939 aa17.97■□□□□ 0.47
Hoxc4-201ENSMUST00000100164 Grwd1Q810D6 446 aaKnown RBP17.97■□□□□ 0.47
Hoxc4-201ENSMUST00000100164 Eif2s2Q99L45 331 aaKnown RBP17.97■□□□□ 0.47
Hoxc4-201ENSMUST00000100164 Ak7Q9D2H2 614 aa17.97■□□□□ 0.47
Hoxc4-201ENSMUST00000100164 Znf518aB2RRF6 1478 aaKnown RBP17.96■□□□□ 0.47
Hoxc4-201ENSMUST00000100164 Tarbp1E9Q368 1579 aa17.96■□□□□ 0.47
Hoxc4-201ENSMUST00000100164 Fmn2Q9JL04 1578 aa17.96■□□□□ 0.47
Hoxc4-201ENSMUST00000100164 Hsp90ab1P11499 724 aaKnown RBP17.95■□□□□ 0.46
Hoxc4-201ENSMUST00000100164 Dot1lQ6XZL8 1540 aa17.94■□□□□ 0.46
Hoxc4-201ENSMUST00000100164 AampJ3QN89 436 aa17.93■□□□□ 0.46
Hoxc4-201ENSMUST00000100164 Dip2bQ3UH60 1574 aa17.93■□□□□ 0.46
Hoxc4-201ENSMUST00000100164 4930407I10RikD3Z5T8 1512 aa17.92■□□□□ 0.46
Hoxc4-201ENSMUST00000100164 Nup155Q99P88 1391 aaKnown RBP17.92■□□□□ 0.46
Hoxc4-201ENSMUST00000100164 DmtnQ9WV69 405 aa17.92■□□□□ 0.46
Hoxc4-201ENSMUST00000100164 Bcl9Q9D219 1425 aa17.92■□□□□ 0.46
Hoxc4-201ENSMUST00000100164 Atf7ipQ7TT18 1306 aa17.92■□□□□ 0.46
Hoxc4-201ENSMUST00000100164 Uggt2E9Q4X2 1504 aa17.91■□□□□ 0.46
Hoxc4-201ENSMUST00000100164 Ccdc183A2AJB1 534 aa17.91■□□□□ 0.46
Hoxc4-201ENSMUST00000100164 Dnttip2Q8R2M2 758 aaKnown RBP17.91■□□□□ 0.46
Hoxc4-201ENSMUST00000100164 Rrp7aQ9D1C9 280 aaKnown RBP17.91■□□□□ 0.46
Hoxc4-201ENSMUST00000100164 Esx1O88933 382 aa17.9■□□□□ 0.46
Hoxc4-201ENSMUST00000100164 PrxO55103 1391 aa17.9■□□□□ 0.46
Hoxc4-201ENSMUST00000100164 Xrn1P97789 1719 aaKnown RBP17.9■□□□□ 0.46
Hoxc4-201ENSMUST00000100164 Trim30dE9PWL0 497 aa17.9■□□□□ 0.46
Hoxc4-201ENSMUST00000100164 Pank3Q8R2W9 370 aa17.89■□□□□ 0.45
Hoxc4-201ENSMUST00000100164 Dcaf11Q91VU6 549 aa17.89■□□□□ 0.45
Hoxc4-201ENSMUST00000100164 Knl1Q66JQ7 1612 aa17.88■□□□□ 0.45
Hoxc4-201ENSMUST00000100164 Topbp1Q6ZQF0 1515 aa17.87■□□□□ 0.45
Hoxc4-201ENSMUST00000100164 RictorQ6QI06 1708 aa17.87■□□□□ 0.45
Hoxc4-201ENSMUST00000100164 Adgrl2Q8JZZ7 1487 aa17.86■□□□□ 0.45
Hoxc4-201ENSMUST00000100164 CltcQ68FD5 1675 aaKnown RBP17.86■□□□□ 0.45
Hoxc4-201ENSMUST00000100164 Zscan10Q3URR7 782 aa17.86■□□□□ 0.45
Hoxc4-201ENSMUST00000100164 Kif3bQ61771 747 aa17.86■□□□□ 0.45
Retrieved 100 of 22,080 RNA–protein pairs in 45.6 ms