RNA–Protein interactions for RNA: ENSMUST00000100064.8

Scn9a-202, Transcript of Sodium channel protein type 9 subunit alpha, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Scn9a, Length 9,840 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9a-202ENSMUST00000100064 Ddx54Q8K4L0 874 aaKnown RBP12.67□□□□□ -0.38
Scn9a-202ENSMUST00000100064 TatQ8QZR1 454 aa12.67□□□□□ -0.38
Scn9a-202ENSMUST00000100064 Hdgfl1Q2VPR5 283 aa12.66□□□□□ -0.38
Scn9a-202ENSMUST00000100064 Ccdc60Q8C4J0 545 aa12.66□□□□□ -0.38
Scn9a-202ENSMUST00000100064 Fam193aQ8CGI1 1231 aaKnown RBP12.66□□□□□ -0.38
Scn9a-202ENSMUST00000100064 IkQ9Z1M8 557 aaKnown RBP12.66□□□□□ -0.38
Scn9a-202ENSMUST00000100064 Ylpm1Q9R0I7 1386 aaKnown RBP12.65□□□□□ -0.38
Scn9a-202ENSMUST00000100064 Gm10471E9Q1C7 252 aa12.65□□□□□ -0.38
Scn9a-202ENSMUST00000100064 Evi5lH3BKQ3 813 aa12.65□□□□□ -0.38
Scn9a-202ENSMUST00000100064 ErbinQ80TH2 1402 aa12.65□□□□□ -0.38
Scn9a-202ENSMUST00000100064 Sh3bgrQ9WUZ7 214 aa12.65□□□□□ -0.38
Scn9a-202ENSMUST00000100064 Necab1Q8BG18 352 aa12.65□□□□□ -0.38
Scn9a-202ENSMUST00000100064 Aebp2Q9Z248 504 aaKnown RBP12.65□□□□□ -0.38
Scn9a-202ENSMUST00000100064 Trim30aP15533 496 aa12.64□□□□□ -0.39
Scn9a-202ENSMUST00000100064 Exoc6Q8R313 802 aa12.64□□□□□ -0.39
Scn9a-202ENSMUST00000100064 Sycp1Q62209 993 aa12.64□□□□□ -0.39
Scn9a-202ENSMUST00000100064 Hap1O35668 628 aa12.64□□□□□ -0.39
Scn9a-202ENSMUST00000100064 Ccdc96Q9CR92 584 aa12.64□□□□□ -0.39
Scn9a-202ENSMUST00000100064 Cc2d1aQ8K1A6 943 aa12.64□□□□□ -0.39
Scn9a-202ENSMUST00000100064 Nap1l2P51860 460 aa12.63□□□□□ -0.39
Scn9a-202ENSMUST00000100064 Gpatch11Q3UFS4 262 aa12.63□□□□□ -0.39
Scn9a-202ENSMUST00000100064 Commd10Q8JZY2 202 aa12.63□□□□□ -0.39
Scn9a-202ENSMUST00000100064 Erc2Q6PH08 957 aa12.63□□□□□ -0.39
Scn9a-202ENSMUST00000100064 Slc4a3P16283 1227 aa12.63□□□□□ -0.39
Scn9a-202ENSMUST00000100064 Zrsr2Q62377 462 aaKnown RBP12.63□□□□□ -0.39
Scn9a-202ENSMUST00000100064 Supt16hQ920B9 1047 aa12.63□□□□□ -0.39
Scn9a-202ENSMUST00000100064 Gsto1O09131 240 aa12.63□□□□□ -0.39
Scn9a-202ENSMUST00000100064 HmmrQ00547 794 aaKnown RBP12.62□□□□□ -0.39
Scn9a-202ENSMUST00000100064 Zranb3Q6NZP1 1069 aa12.62□□□□□ -0.39
Scn9a-202ENSMUST00000100064 Usp40Q8BWR4 1235 aa12.62□□□□□ -0.39
Scn9a-202ENSMUST00000100064 Ttc5Q99LG4 440 aa12.62□□□□□ -0.39
Scn9a-202ENSMUST00000100064 Me1P06801 572 aa12.62□□□□□ -0.39
Scn9a-202ENSMUST00000100064 Cep89Q9CZX2 791 aa12.62□□□□□ -0.39
Scn9a-202ENSMUST00000100064 Ehmt1Q5DW34 1296 aa12.61□□□□□ -0.39
Scn9a-202ENSMUST00000100064 Cep162Q6ZQ06 1403 aa12.61□□□□□ -0.39
Scn9a-202ENSMUST00000100064 Wdhd1P59328 1117 aa12.61□□□□□ -0.39
Scn9a-202ENSMUST00000100064 KinQ8K339 391 aa12.61□□□□□ -0.39
Scn9a-202ENSMUST00000100064 FanciQ8K368 1330 aa12.61□□□□□ -0.39
Scn9a-202ENSMUST00000100064 PnisrA2AJT4 805 aaKnown RBP12.6□□□□□ -0.39
Scn9a-202ENSMUST00000100064 Ncbp1Q3UYV9 790 aaKnown RBP12.6□□□□□ -0.39
Scn9a-202ENSMUST00000100064 TefQ9JLC6 301 aa12.6□□□□□ -0.39
Scn9a-202ENSMUST00000100064 Plekhd1B2RPU2 505 aa12.6□□□□□ -0.39
Scn9a-202ENSMUST00000100064 Carmil1Q6EDY6 1374 aa12.6□□□□□ -0.39
Scn9a-202ENSMUST00000100064 Abl1P00520 1123 aa12.6□□□□□ -0.39
Scn9a-202ENSMUST00000100064 G3bp1P97855 465 aaKnown RBP12.6□□□□□ -0.39
Scn9a-202ENSMUST00000100064 Polr1aO35134 1717 aaKnown RBP12.6□□□□□ -0.39
Scn9a-202ENSMUST00000100064 GlmnQ8BZM1 596 aa12.59□□□□□ -0.39
Scn9a-202ENSMUST00000100064 GsdmaQ9EST1 446 aa12.59□□□□□ -0.39
Scn9a-202ENSMUST00000100064 Gm21698A0A087WQP8 267 aa12.59□□□□□ -0.39
Scn9a-202ENSMUST00000100064 Gm21671G3UY31 267 aa12.59□□□□□ -0.39
Scn9a-202ENSMUST00000100064 Kif3aP28741 701 aa12.59□□□□□ -0.39
Scn9a-202ENSMUST00000100064 Ripply1Q2WG77 201 aa12.59□□□□□ -0.39
Scn9a-202ENSMUST00000100064 Rsph3aQ3UFY4 516 aa12.59□□□□□ -0.39
Scn9a-202ENSMUST00000100064 Plagl1Q9JLQ4 704 aa12.59□□□□□ -0.39
Scn9a-202ENSMUST00000100064 Gpatch3Q8BIY1 525 aa12.59□□□□□ -0.39
Scn9a-202ENSMUST00000100064 Wdr78E9PYY5 807 aa12.58□□□□□ -0.4
Scn9a-202ENSMUST00000100064 Drc7Q6V3W6 876 aa12.58□□□□□ -0.4
Scn9a-202ENSMUST00000100064 Glipr1l2Q9CQ35 332 aa12.58□□□□□ -0.4
Scn9a-202ENSMUST00000100064 Mapk8ip1Q9WVI9 707 aa12.58□□□□□ -0.4
Scn9a-202ENSMUST00000100064 Gcom1E9PZ54 550 aa12.58□□□□□ -0.4
Scn9a-202ENSMUST00000100064 MyzapQ3UIJ9 466 aa12.58□□□□□ -0.4
Scn9a-202ENSMUST00000100064 Fam71e1A1L3C1 212 aa12.58□□□□□ -0.4
Scn9a-202ENSMUST00000100064 ZgpatQ8VDM1 511 aa12.57□□□□□ -0.4
Scn9a-202ENSMUST00000100064 Nap1l1P28656 391 aaKnown RBP12.57□□□□□ -0.4
Scn9a-202ENSMUST00000100064 Sel1lQ9Z2G6 790 aa12.57□□□□□ -0.4
Scn9a-202ENSMUST00000100064 Fnbp4Q6ZQ03 1031 aa12.57□□□□□ -0.4
Scn9a-202ENSMUST00000100064 Ell2Q3UKU1 639 aa12.57□□□□□ -0.4
Scn9a-202ENSMUST00000100064 Fmnl2A2APV2 1086 aa12.57□□□□□ -0.4
Scn9a-202ENSMUST00000100064 Ccdc34Q3UI66 367 aa12.57□□□□□ -0.4
Scn9a-202ENSMUST00000100064 Smg6P61406 1418 aaKnown RBP12.57□□□□□ -0.4
Scn9a-202ENSMUST00000100064 Bicd2Q921C5 820 aa12.57□□□□□ -0.4
Scn9a-202ENSMUST00000100064 NaspQ99MD9 773 aaKnown RBP12.57□□□□□ -0.4
Scn9a-202ENSMUST00000100064 Agtpbp1Q641K1 1218 aa12.56□□□□□ -0.4
Scn9a-202ENSMUST00000100064 Znf704Q9ERQ3 566 aa12.56□□□□□ -0.4
Scn9a-202ENSMUST00000100064 Rufy1Q8BIJ7 712 aa12.56□□□□□ -0.4
Scn9a-202ENSMUST00000100064 Rbm28Q8CGC6 750 aaKnown RBP12.56□□□□□ -0.4
Scn9a-202ENSMUST00000100064 Zeb2Q9R0G7 1215 aa12.56□□□□□ -0.4
Scn9a-202ENSMUST00000100064 Gtf2f1Q3THK3 508 aaKnown RBP12.56□□□□□ -0.4
Scn9a-202ENSMUST00000100064 Pank3Q8R2W9 370 aa12.56□□□□□ -0.4
Scn9a-202ENSMUST00000100064 Cfdp1O88271 295 aaKnown RBP12.55□□□□□ -0.4
Scn9a-202ENSMUST00000100064 Bcl2l13P59017 434 aa12.55□□□□□ -0.4
Scn9a-202ENSMUST00000100064 Smc2Q8CG48 1191 aaKnown RBP12.55□□□□□ -0.4
Scn9a-202ENSMUST00000100064 Cc2d2bA0A286YDU8 1405 aa12.54□□□□□ -0.4
Scn9a-202ENSMUST00000100064 Ripk4Q9ERK0 786 aa12.54□□□□□ -0.4
Scn9a-202ENSMUST00000100064 Triml2E9PW10 424 aa12.54□□□□□ -0.4
Scn9a-202ENSMUST00000100064 Kif7B7ZNG0 1348 aa12.54□□□□□ -0.4
Scn9a-202ENSMUST00000100064 Mphosph10Q810V0 681 aaKnown RBP12.54□□□□□ -0.4
Scn9a-202ENSMUST00000100064 Nsd2Q8BVE8 1365 aa12.54□□□□□ -0.4
Scn9a-202ENSMUST00000100064 Gimap6Q8K349 305 aa12.54□□□□□ -0.4
Scn9a-202ENSMUST00000100064 Usp16Q99LG0 825 aa12.53□□□□□ -0.4
Scn9a-202ENSMUST00000100064 Gprasp1Q5U4C1 1347 aa12.53□□□□□ -0.4
Scn9a-202ENSMUST00000100064 OptnQ8K3K8 584 aa12.53□□□□□ -0.4
Scn9a-202ENSMUST00000100064 Rock1P70335 1354 aa12.53□□□□□ -0.4
Scn9a-202ENSMUST00000100064 Washc4Q3UMB9 1173 aa12.53□□□□□ -0.4
Scn9a-202ENSMUST00000100064 Znhit6Q3UFB2 460 aaKnown RBP12.53□□□□□ -0.4
Scn9a-202ENSMUST00000100064 Cfap99A0A140LIX9 648 aa12.53□□□□□ -0.4
Scn9a-202ENSMUST00000100064 Trim34bJ3QNR8 485 aa12.53□□□□□ -0.4
Scn9a-202ENSMUST00000100064 Cnnm1Q0GA42 951 aa12.53□□□□□ -0.4
Scn9a-202ENSMUST00000100064 Kcnh8P59111 1102 aa12.53□□□□□ -0.4
Scn9a-202ENSMUST00000100064 Lrrc45Q8CIM1 670 aa12.52□□□□□ -0.4
Retrieved 100 of 22,080 RNA–protein pairs in 63.7 ms