RNA–Protein interactions for RNA: ENSMUST00000066432.11

Scn3a-201, Transcript of Sodium channel protein, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Scn3a, Length 9,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3a-201ENSMUST00000066432 Plekhg5Q66T02 1073 aa9□□□□□ -0.97
Scn3a-201ENSMUST00000066432 GsdmaQ9EST1 446 aa9□□□□□ -0.97
Scn3a-201ENSMUST00000066432 AI481877A2ALV5 1481 aa9□□□□□ -0.97
Scn3a-201ENSMUST00000066432 IbtkQ6ZPR6 1352 aaKnown RBP9□□□□□ -0.97
Scn3a-201ENSMUST00000066432 Cspp1B2RX88 1205 aa9□□□□□ -0.97
Scn3a-201ENSMUST00000066432 Exoc6Q8R313 802 aa9□□□□□ -0.97
Scn3a-201ENSMUST00000066432 Dhx8A2A4P0 1244 aaKnown RBP8.99□□□□□ -0.97
Scn3a-201ENSMUST00000066432 Gnai1B2RSH2 354 aa8.99□□□□□ -0.97
Scn3a-201ENSMUST00000066432 Gnai3Q9DC51 354 aa8.99□□□□□ -0.97
Scn3a-201ENSMUST00000066432 Eif3aP23116 1344 aaKnown RBP8.99□□□□□ -0.97
Scn3a-201ENSMUST00000066432 Cfap65Q3V0B4 1847 aa8.99□□□□□ -0.97
Scn3a-201ENSMUST00000066432 Sos1Q62245 1319 aa8.99□□□□□ -0.97
Scn3a-201ENSMUST00000066432 Trim26Q99PN3 545 aa8.99□□□□□ -0.97
Scn3a-201ENSMUST00000066432 Zscan10Q3URR7 782 aa8.99□□□□□ -0.97
Scn3a-201ENSMUST00000066432 Tceal9Q9DD24 104 aa8.99□□□□□ -0.97
Scn3a-201ENSMUST00000066432 Sh3bp5Q9Z131 463 aa8.99□□□□□ -0.97
Scn3a-201ENSMUST00000066432 Trim58Q5NCC9 485 aa8.99□□□□□ -0.97
Scn3a-201ENSMUST00000066432 Eif2ak4Q9QZ05 1648 aa8.98□□□□□ -0.97
Scn3a-201ENSMUST00000066432 Slc4a1apE9PX68 744 aa8.98□□□□□ -0.97
Scn3a-201ENSMUST00000066432 Rsph3aQ3UFY4 516 aa8.98□□□□□ -0.97
Scn3a-201ENSMUST00000066432 Slx4Q6P1D7 1565 aa8.98□□□□□ -0.97
Scn3a-201ENSMUST00000066432 Cers3Q1A3B0 383 aa8.98□□□□□ -0.97
Scn3a-201ENSMUST00000066432 Plcb2A3KGF7 1181 aa8.98□□□□□ -0.97
Scn3a-201ENSMUST00000066432 Gtf3c3Q3TMP1 882 aa8.98□□□□□ -0.97
Scn3a-201ENSMUST00000066432 Neurod2Q62414 383 aa8.98□□□□□ -0.97
Scn3a-201ENSMUST00000066432 Fan1Q69ZT1 1020 aa8.97□□□□□ -0.97
Scn3a-201ENSMUST00000066432 Samd9lQ69Z37 1561 aa8.97□□□□□ -0.97
Scn3a-201ENSMUST00000066432 Ipo9Q91YE6 1041 aa8.97□□□□□ -0.97
Scn3a-201ENSMUST00000066432 Srek1Q8BZX4 494 aaKnown RBP8.97□□□□□ -0.97
Scn3a-201ENSMUST00000066432 PtprgQ05909 1442 aa8.97□□□□□ -0.97
Scn3a-201ENSMUST00000066432 Kif14L0N7N1 1674 aaKnown RBP8.97□□□□□ -0.97
Scn3a-201ENSMUST00000066432 Tsen2Q6P7W5 460 aa8.97□□□□□ -0.97
Scn3a-201ENSMUST00000066432 Usp40Q8BWR4 1235 aa8.97□□□□□ -0.97
Scn3a-201ENSMUST00000066432 Tubb6Q922F4 447 aa8.97□□□□□ -0.97
Scn3a-201ENSMUST00000066432 UvssaQ9D479 717 aa8.97□□□□□ -0.97
Scn3a-201ENSMUST00000066432 Plch2A2AP18 1501 aa8.97□□□□□ -0.97
Scn3a-201ENSMUST00000066432 Neo1P97798 1493 aa8.97□□□□□ -0.97
Scn3a-201ENSMUST00000066432 St18Q80TY4 1045 aa8.96□□□□□ -0.97
Scn3a-201ENSMUST00000066432 SphkapQ6NSW3 1687 aa8.96□□□□□ -0.97
Scn3a-201ENSMUST00000066432 Pde4cQ3UEI1 686 aa8.96□□□□□ -0.97
Scn3a-201ENSMUST00000066432 Pik3c2gO70167 1506 aa8.96□□□□□ -0.97
Scn3a-201ENSMUST00000066432 Mfap1aC0HKD8 439 aaKnown RBP8.96□□□□□ -0.97
Scn3a-201ENSMUST00000066432 Mfap1bC0HKD9 439 aaKnown RBP8.96□□□□□ -0.97
Scn3a-201ENSMUST00000066432 Fchsd2Q3USJ8 740 aa8.96□□□□□ -0.97
Scn3a-201ENSMUST00000066432 Rprd2Q6NXI6 1469 aaKnown RBP8.96□□□□□ -0.98
Scn3a-201ENSMUST00000066432 Stk26Q99JT2 416 aa8.95□□□□□ -0.98
Scn3a-201ENSMUST00000066432 NinlQ6ZQ12 1394 aa8.95□□□□□ -0.98
Scn3a-201ENSMUST00000066432 MecomP14404 1042 aa8.95□□□□□ -0.98
Scn3a-201ENSMUST00000066432 RdxP26043 583 aaKnown RBP8.95□□□□□ -0.98
Scn3a-201ENSMUST00000066432 AU015836B2RUM3 263 aa8.95□□□□□ -0.98
Scn3a-201ENSMUST00000066432 Rnf20Q5DTM8 973 aa8.95□□□□□ -0.98
Scn3a-201ENSMUST00000066432 Cplx2P84086 134 aa8.95□□□□□ -0.98
Scn3a-201ENSMUST00000066432 Polr3aB2RXC6 1390 aa8.95□□□□□ -0.98
Scn3a-201ENSMUST00000066432 Eif4g3Q80XI3 1579 aaKnown RBP8.95□□□□□ -0.98
Scn3a-201ENSMUST00000066432 Chmp7Q8R1T1 451 aa8.95□□□□□ -0.98
Scn3a-201ENSMUST00000066432 Pank3Q8R2W9 370 aa8.95□□□□□ -0.98
Scn3a-201ENSMUST00000066432 Rusc2Q80U22 1514 aa8.95□□□□□ -0.98
Scn3a-201ENSMUST00000066432 Cchcr1Q8K2I2 770 aa8.95□□□□□ -0.98
Scn3a-201ENSMUST00000066432 Adamts12Q811B3 1600 aa8.95□□□□□ -0.98
Scn3a-201ENSMUST00000066432 Mast1Q9R1L5 1570 aa8.94□□□□□ -0.98
Scn3a-201ENSMUST00000066432 Abcc5Q9R1X5 1436 aa8.94□□□□□ -0.98
Scn3a-201ENSMUST00000066432 Rassf8Q8CJ96 419 aa8.94□□□□□ -0.98
Scn3a-201ENSMUST00000066432 PtprkP35822 1457 aa8.94□□□□□ -0.98
Scn3a-201ENSMUST00000066432 Znf692Q3U381 531 aa8.94□□□□□ -0.98
Scn3a-201ENSMUST00000066432 Erc2Q6PH08 957 aa8.94□□□□□ -0.98
Scn3a-201ENSMUST00000066432 Ksr2Q3UVC0 959 aa8.93□□□□□ -0.98
Scn3a-201ENSMUST00000066432 Iffo2Q8R2V2 512 aa8.93□□□□□ -0.98
Scn3a-201ENSMUST00000066432 Kif21bQ9QXL1 1668 aa8.93□□□□□ -0.98
Scn3a-201ENSMUST00000066432 Plekhd1B2RPU2 505 aa8.93□□□□□ -0.98
Scn3a-201ENSMUST00000066432 Birc3O08863 600 aa8.93□□□□□ -0.98
Scn3a-201ENSMUST00000066432 Tnnt1O88346 262 aa8.93□□□□□ -0.98
Scn3a-201ENSMUST00000066432 Map7d2A2AG50 781 aa8.92□□□□□ -0.98
Scn3a-201ENSMUST00000066432 Cnga1P29974 684 aa8.92□□□□□ -0.98
Scn3a-201ENSMUST00000066432 PsapQ61207 557 aaKnown RBP8.92□□□□□ -0.98
Scn3a-201ENSMUST00000066432 Filip1lQ6P6L0 1131 aa8.92□□□□□ -0.98
Scn3a-201ENSMUST00000066432 GphnQ8BUV3 769 aaKnown RBP8.92□□□□□ -0.98
Scn3a-201ENSMUST00000066432 Isy1Q69ZQ2 285 aaKnown RBP8.92□□□□□ -0.98
Scn3a-201ENSMUST00000066432 ArxO35085 564 aa8.92□□□□□ -0.98
Scn3a-201ENSMUST00000066432 Mapkbp1Q6NS57 1503 aa8.92□□□□□ -0.98
Scn3a-201ENSMUST00000066432 NexnQ7TPW1 607 aa8.92□□□□□ -0.98
Scn3a-201ENSMUST00000066432 Lrrcc1Q69ZB0 1026 aa8.92□□□□□ -0.98
Scn3a-201ENSMUST00000066432 Plxnc1Q9QZC2 1574 aa8.91□□□□□ -0.98
Scn3a-201ENSMUST00000066432 Cavin4A2AMM0 362 aa8.91□□□□□ -0.98
Scn3a-201ENSMUST00000066432 Hook1Q8BIL5 728 aa8.91□□□□□ -0.98
Scn3a-201ENSMUST00000066432 KinQ8K339 391 aa8.91□□□□□ -0.98
Scn3a-201ENSMUST00000066432 AnkarA2RT91 1465 aa8.91□□□□□ -0.98
Scn3a-201ENSMUST00000066432 1700019A02RikA0A087WPV9 146 aa8.91□□□□□ -0.98
Scn3a-201ENSMUST00000066432 Mre11Q61216 706 aa8.91□□□□□ -0.98
Scn3a-201ENSMUST00000066432 Shq1Q7TMX5 569 aa8.91□□□□□ -0.98
Scn3a-201ENSMUST00000066432 U2surpQ6NV83 1029 aaKnown RBP8.91□□□□□ -0.98
Scn3a-201ENSMUST00000066432 OptnQ8K3K8 584 aa8.91□□□□□ -0.98
Scn3a-201ENSMUST00000066432 Prkrip1Q9CWV6 186 aaKnown RBP8.91□□□□□ -0.98
Scn3a-201ENSMUST00000066432 Fyb1O35601 819 aa8.91□□□□□ -0.98
Scn3a-201ENSMUST00000066432 VgfQ0VGU4 617 aa8.91□□□□□ -0.98
Scn3a-201ENSMUST00000066432 Gpatch8A2A6A1 1505 aa8.91□□□□□ -0.98
Scn3a-201ENSMUST00000066432 Puf60Q3UEB3 564 aaKnown RBP8.9□□□□□ -0.98
Scn3a-201ENSMUST00000066432 Cul7Q8VE73 1689 aa8.9□□□□□ -0.98
Scn3a-201ENSMUST00000066432 Swt1Q9DBQ9 907 aa8.9□□□□□ -0.98
Scn3a-201ENSMUST00000066432 Zeb2Q9R0G7 1215 aa8.9□□□□□ -0.98
Scn3a-201ENSMUST00000066432 Atp10dQ8K2X1 1416 aa8.9□□□□□ -0.98
Retrieved 100 of 22,080 RNA–protein pairs in 14.2 ms