RNA–Protein interactions for RNA: ENSMUST00000055758.15

Ubr3-201, Transcript of E3 ubiquitin-protein ligase UBR3, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ubr3, Length 8,072 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr3-201ENSMUST00000055758 A0A1L1SQF0 893 aa18.96■□□□□ 0.63
Ubr3-201ENSMUST00000055758 EzrP26040 586 aaKnown RBP18.96■□□□□ 0.63
Ubr3-201ENSMUST00000055758 TimelessQ9R1X4 1197 aa18.95■□□□□ 0.62
Ubr3-201ENSMUST00000055758 Gpatch3Q8BIY1 525 aa18.95■□□□□ 0.62
Ubr3-201ENSMUST00000055758 Psme1P97371 249 aa18.95■□□□□ 0.62
Ubr3-201ENSMUST00000055758 Cplx2P84086 134 aa18.95■□□□□ 0.62
Ubr3-201ENSMUST00000055758 Def6Q8C2K1 630 aa18.94■□□□□ 0.62
Ubr3-201ENSMUST00000055758 Znf704Q9ERQ3 566 aa18.94■□□□□ 0.62
Ubr3-201ENSMUST00000055758 KarsQ99MN1 595 aaKnown RBP18.94■□□□□ 0.62
Ubr3-201ENSMUST00000055758 Ccdc173A0JLY1 547 aa18.94■□□□□ 0.62
Ubr3-201ENSMUST00000055758 Kif3aP28741 701 aa18.93■□□□□ 0.62
Ubr3-201ENSMUST00000055758 Usp48Q3V0C5 1052 aa18.93■□□□□ 0.62
Ubr3-201ENSMUST00000055758 Evc2Q8K1G2 1220 aa18.93■□□□□ 0.62
Ubr3-201ENSMUST00000055758 Pank3Q8R2W9 370 aa18.93■□□□□ 0.62
Ubr3-201ENSMUST00000055758 NaspQ99MD9 773 aaKnown RBP18.92■□□□□ 0.62
Ubr3-201ENSMUST00000055758 Cabp1Q9JLK7 227 aa18.92■□□□□ 0.62
Ubr3-201ENSMUST00000055758 Trim55G3X8Y1 545 aa18.92■□□□□ 0.62
Ubr3-201ENSMUST00000055758 G3bp1P97855 465 aaKnown RBP18.92■□□□□ 0.62
Ubr3-201ENSMUST00000055758 Ddx11Q6AXC6 880 aa18.91■□□□□ 0.62
Ubr3-201ENSMUST00000055758 March6Q6ZQ89 909 aa18.9■□□□□ 0.62
Ubr3-201ENSMUST00000055758 Kif27Q7M6Z4 1394 aa18.9■□□□□ 0.62
Ubr3-201ENSMUST00000055758 Arhgap35Q91YM2 1499 aa18.9■□□□□ 0.62
Ubr3-201ENSMUST00000055758 Cdkn1cP49919 348 aa18.89■□□□□ 0.61
Ubr3-201ENSMUST00000055758 Baz1bQ9Z277 1479 aa18.89■□□□□ 0.61
Ubr3-201ENSMUST00000055758 Map3k7clP58500 142 aa18.89■□□□□ 0.61
Ubr3-201ENSMUST00000055758 Ccar2Q8VDP4 922 aaKnown RBP18.89■□□□□ 0.61
Ubr3-201ENSMUST00000055758 Fyco1Q8VDC1 1437 aa18.89■□□□□ 0.61
Ubr3-201ENSMUST00000055758 Triml2E9PW10 424 aa18.89■□□□□ 0.61
Ubr3-201ENSMUST00000055758 Kif16bB1AVY7 1312 aa18.88■□□□□ 0.61
Ubr3-201ENSMUST00000055758 Kif3cO35066 796 aa18.88■□□□□ 0.61
Ubr3-201ENSMUST00000055758 Fmnl2A2APV2 1086 aa18.88■□□□□ 0.61
Ubr3-201ENSMUST00000055758 Ccp110Q7TSH4 1004 aa18.87■□□□□ 0.61
Ubr3-201ENSMUST00000055758 Rnf20Q5DTM8 973 aa18.86■□□□□ 0.61
Ubr3-201ENSMUST00000055758 Stk31Q99MW1 1018 aa18.86■□□□□ 0.61
Ubr3-201ENSMUST00000055758 Stk11ipQ3TAA7 1072 aa18.86■□□□□ 0.61
Ubr3-201ENSMUST00000055758 Fam43aQ8BUP8 424 aa18.85■□□□□ 0.61
Ubr3-201ENSMUST00000055758 Q9D2X8 372 aa18.85■□□□□ 0.61
Ubr3-201ENSMUST00000055758 Txndc2Q6P902 515 aa18.85■□□□□ 0.61
Ubr3-201ENSMUST00000055758 Rock1P70335 1354 aa18.84■□□□□ 0.61
Ubr3-201ENSMUST00000055758 Esx1O88933 382 aa18.84■□□□□ 0.61
Ubr3-201ENSMUST00000055758 Gbp4Q61107 620 aa18.84■□□□□ 0.61
Ubr3-201ENSMUST00000055758 Fan1Q69ZT1 1020 aa18.84■□□□□ 0.61
Ubr3-201ENSMUST00000055758 Hmox1P14901 289 aa18.84■□□□□ 0.61
Ubr3-201ENSMUST00000055758 Neurod6P48986 337 aa18.84■□□□□ 0.61
Ubr3-201ENSMUST00000055758 Necab1Q8BG18 352 aa18.84■□□□□ 0.61
Ubr3-201ENSMUST00000055758 Ubxn4Q8VCH8 506 aa18.84■□□□□ 0.61
Ubr3-201ENSMUST00000055758 Inpp5dQ9ES52 1191 aa18.83■□□□□ 0.61
Ubr3-201ENSMUST00000055758 Spata24Q6P926 205 aa18.83■□□□□ 0.6
Ubr3-201ENSMUST00000055758 Babam1Q3UI43 333 aa18.82■□□□□ 0.6
Ubr3-201ENSMUST00000055758 Trim30cD3YVI9 513 aa18.82■□□□□ 0.6
Ubr3-201ENSMUST00000055758 Dhx16G3X8X0 1044 aaKnown RBP18.82■□□□□ 0.6
Ubr3-201ENSMUST00000055758 Gtf2f1Q3THK3 508 aaKnown RBP18.82■□□□□ 0.6
Ubr3-201ENSMUST00000055758 Frmd3Q8BHD4 595 aa18.82■□□□□ 0.6
Ubr3-201ENSMUST00000055758 Znf692Q3U381 531 aa18.81■□□□□ 0.6
Ubr3-201ENSMUST00000055758 Tmco3Q8BH01 678 aa18.81■□□□□ 0.6
Ubr3-201ENSMUST00000055758 Ccdc183A2AJB1 534 aa18.81■□□□□ 0.6
Ubr3-201ENSMUST00000055758 GsdmaQ9EST1 446 aa18.81■□□□□ 0.6
Ubr3-201ENSMUST00000055758 Pak3Q61036 559 aa18.81■□□□□ 0.6
Ubr3-201ENSMUST00000055758 Q8C5K5 320 aa18.81■□□□□ 0.6
Ubr3-201ENSMUST00000055758 Kif7B7ZNG0 1348 aa18.81■□□□□ 0.6
Ubr3-201ENSMUST00000055758 NefhP19246 1090 aa18.8■□□□□ 0.6
Ubr3-201ENSMUST00000055758 Trim58Q5NCC9 485 aa18.8■□□□□ 0.6
Ubr3-201ENSMUST00000055758 Mical3Q8CJ19 1993 aa18.79■□□□□ 0.6
Ubr3-201ENSMUST00000055758 Pank1Q8K4K6 548 aa18.79■□□□□ 0.6
Ubr3-201ENSMUST00000055758 Nek4Q9Z1J2 792 aa18.78■□□□□ 0.6
Ubr3-201ENSMUST00000055758 Nutm1Q8BHP2 1126 aa18.78■□□□□ 0.6
Ubr3-201ENSMUST00000055758 Erlin2Q8BFZ9 340 aa18.78■□□□□ 0.6
Ubr3-201ENSMUST00000055758 Nup155Q99P88 1391 aaKnown RBP18.78■□□□□ 0.6
Ubr3-201ENSMUST00000055758 Ttll13A4Q9F6 804 aa18.78■□□□□ 0.6
Ubr3-201ENSMUST00000055758 Aebp1Q640N1 1128 aa18.77■□□□□ 0.6
Ubr3-201ENSMUST00000055758 Tnpo1Q8BFY9 898 aaKnown RBP18.77■□□□□ 0.6
Ubr3-201ENSMUST00000055758 HdgfP51859 237 aaKnown RBP18.77■□□□□ 0.6
Ubr3-201ENSMUST00000055758 Paxip1Q6NZQ4 1056 aa18.77■□□□□ 0.6
Ubr3-201ENSMUST00000055758 Commd10Q8JZY2 202 aa18.77■□□□□ 0.6
Ubr3-201ENSMUST00000055758 PhaxQ9JJT9 385 aaKnown RBP18.77■□□□□ 0.6
Ubr3-201ENSMUST00000055758 Kcnj4P52189 445 aa18.77■□□□□ 0.59
Ubr3-201ENSMUST00000055758 L1td1Q587J6 782 aaKnown RBP18.77■□□□□ 0.59
Ubr3-201ENSMUST00000055758 Stard8Q8K031 1019 aa18.77■□□□□ 0.59
Ubr3-201ENSMUST00000055758 Gtf2a1Q99PM3 378 aa18.77■□□□□ 0.59
Ubr3-201ENSMUST00000055758 Cep112Q5PR68 954 aa18.76■□□□□ 0.59
Ubr3-201ENSMUST00000055758 Nectin2P32507 530 aa18.76■□□□□ 0.59
Ubr3-201ENSMUST00000055758 Ppp1r18Q8BQ30 594 aa18.76■□□□□ 0.59
Ubr3-201ENSMUST00000055758 Smc4Q8CG47 1286 aa18.76■□□□□ 0.59
Ubr3-201ENSMUST00000055758 Secisbp2lQ6A098 1086 aaKnown RBP18.76■□□□□ 0.59
Ubr3-201ENSMUST00000055758 Ccdc96Q9CR92 584 aa18.75■□□□□ 0.59
Ubr3-201ENSMUST00000055758 CenpjQ569L8 1344 aa18.75■□□□□ 0.59
Ubr3-201ENSMUST00000055758 CrcpO35427 148 aa18.75■□□□□ 0.59
Ubr3-201ENSMUST00000055758 Arid3cA6PWV5 409 aa18.75■□□□□ 0.59
Ubr3-201ENSMUST00000055758 Cabp4Q8VHC5 271 aa18.75■□□□□ 0.59
Ubr3-201ENSMUST00000055758 SelenooQ9DBC0 667 aa18.75■□□□□ 0.59
Ubr3-201ENSMUST00000055758 Baz1aO88379 1555 aa18.74■□□□□ 0.59
Ubr3-201ENSMUST00000055758 Tmx4Q8C0L0 335 aa18.74■□□□□ 0.59
Ubr3-201ENSMUST00000055758 Stk3Q9JI10 497 aa18.74■□□□□ 0.59
Ubr3-201ENSMUST00000055758 Ric3Q8BPM6 367 aa18.73■□□□□ 0.59
Ubr3-201ENSMUST00000055758 Arglu1Q3UL36 271 aaKnown RBP18.73■□□□□ 0.59
Ubr3-201ENSMUST00000055758 Phf14Q9D4H9 881 aa18.73■□□□□ 0.59
Ubr3-201ENSMUST00000055758 Usp47Q8BY87 1376 aa18.73■□□□□ 0.59
Ubr3-201ENSMUST00000055758 Me1P06801 572 aa18.73■□□□□ 0.59
Ubr3-201ENSMUST00000055758 CastP51125 788 aa18.72■□□□□ 0.59
Ubr3-201ENSMUST00000055758 Cfap99A0A140LIX9 648 aa18.71■□□□□ 0.59
Retrieved 100 of 22,080 RNA–protein pairs in 62.7 ms